New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5378580 = | 37 (1.250) | 3 (0.100) | 3/242 | NT | 7.0% | coding (117/1674 nt) | recN | DNA repair/recombination protein |
? | NC_002947 | 5378624 = | 43 (1.480) | coding (161/1674 nt) | recN | DNA repair/recombination protein |
CACGCCGCTGTCGGCACGGTCGCCCAGGGCAAGGCCGAGAGCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5378625‑5378580 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgTGGTGCGCCCCGGCACCGACAAGGCAGACATCCTGGCCACCTTCGACCTGGTGGACATTCCCGAAGCGCACACCTGGCTGGCCGAGCGCGACCTGGACAACGAA > NC_002947/5378624‑5378727 CACGCCGCTGTCGGCACGGTCGCCCAGGGCAAGGCCGAGAGCGTCGTGGTGCGCCCCGGCACCGACAAGGCAGACATCCTGGCCACCTTCGACCTGGTGGACATTCCCGAAGCGCACACCTGGCTGGCCGAGCGCGGCCTGGACAACGAA > 1:79247/1‑150 TGTCGGCACGGTCGCCCAGGGCAAGGCCGAGAGCGTCGTGGTGCGCCCCGGCACCGACAAGGCAGACATCCTGGCCACCTTCGACCTGGTG > 1:583975/1‑91 TGTCGGCACGGTCGCCCAGGGCAAGGCCGAGAGCGTCGTGGTGCGCCCCGGCACCGACAAGGCAGACATCCTGGCCACCTTCGACCTGGTG < 2:583975/91‑1 CACGCCGCTGTCGGCACGGTCGCCCAGGGCAAGGCCGAGAGCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5378625‑5378580 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgTGGTGCGCCCCGGCACCGACAAGGCAGACATCCTGGCCACCTTCGACCTGGTGGACATTCCCGAAGCGCACACCTGGCTGGCCGAGCGCGACCTGGACAACGAA > NC_002947/5378624‑5378727 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |