| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5782373 | 38 (1.290) | 4 (0.140) | 4/238 | NT | 10.4% | coding (792/3309 nt) | kefA | intermediate mechanosensitive channel protein |
| ? | NC_002947 | = 5782390 | 32 (1.120) | coding (809/3309 nt) | kefA | intermediate mechanosensitive channel protein | |||||
GACCTCGGCAATGCGCGTCACGACCTGATGGTCGAGCGCGCTGCGCGCCTGGAGCAGGAAATCCAGGACCTGCAGACGCTGATCAACGCCAAACGCCTGGCCCAGTCCCAGGAAGCCGTCACCCAGCAGTCGATCGAGGCTCAGAAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5782224‑5782373‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAGCAGGCTGCTGCCGCCGGCCTTCTGAGCCTCGATCGACTGCTGGGTGACGGCTTCCTGGGACTGGGCCAGGCGTTTGGCGTTGATCAGCGTCTGCAGGTCCTGGATTTCCTGCTCCAGGCGCGCAGCGCGCTCGACCATCAGGTCGTG < NC_002947/5782390‑5782242 GACCTCGGCAATGCGCGTCACGACCTGATGGTCGAGCGCGCTGCGCGCCTGGAGCAGGAAATCCAGGACCTGCAGACGCTGATCAACGCCAAACGCCTGGCCCAGTCCCAGGAAGCCGTCACCCAGCAGTCGATCGAGGCTCAGAAGGC < 1:427073/149‑1GACCTCGGCAATGCGCGTCACGACCTGATGGTCGAGCGCGCTGCGCGCCTGGAGCAGGAAATCCAGGACCTGCAGACGCTGATCAACGCCAAACGCCTGGCCCAGTCCCAGGAAGCCGTCACCCAGCAGTCGATCGAGGCTCAGAAGGC > 2:427073/1‑149 CCTGGCCCAGTCCCAGGAAGCCGTCACCCAGCAGTCGATCGAGGCTCAGAAGGCCAGCAGGCTGCTGCCGCCGGCC > 1:729223/1‑76 CCTGGCCCAGTCCCAGGAAGCCGTCACCCAGCAGTCGATCGAGGCTCAGAAGGCCAGCAGGCTGCTGCCGCCGGCC < 2:729223/76‑1 CGTCACCCAGCAGTCGATCGAGGCTCAGAAGGCCAGCAGGCTGCTGCCGCCGGCCTT < 1:200615/57‑1 CGTCACCCAGCAGTCGATCGAGGCTCAGAAGGCCAGCAGGCTGCTGCCGCCGGCCTT > 2:200615/1‑57 CAGCAGGCTGCTGCCGCCGGCCTTCTGAGCCTCGATCGACTGCTGGGTGACGGCTTCCTGGGACTGGGCCAGGCGTTTGGCGTTGATCAGCGTCTGCAGGTCCTGGATTTCCTGCTCCAGGCGCGCAGCGCGCTCGACCATCAGGTCGTG < 2:410539/150‑1 GACCTCGGCAATGCGCGTCACGACCTGATGGTCGAGCGCGCTGCGCGCCTGGAGCAGGAAATCCAGGACCTGCAGACGCTGATCAACGCCAAACGCCTGGCCCAGTCCCAGGAAGCCGTCACCCAGCAGTCGATCGAGGCTCAGAAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5782224‑5782373‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAGCAGGCTGCTGCCGCCGGCCTTCTGAGCCTCGATCGACTGCTGGGTGACGGCTTCCTGGGACTGGGCCAGGCGTTTGGCGTTGATCAGCGTCTGCAGGTCCTGGATTTCCTGCTCCAGGCGCGCAGCGCGCTCGACCATCAGGTCGTG < NC_002947/5782390‑5782242 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |