New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5945253 | 35 (1.180) | 4 (0.140) | 4/238 | NT | 10.5% | coding (346/969 nt) | PP_5212 | iron‑sulfur‑binding oxidoreductase |
? | NC_002947 | = 5945286 | 34 (1.190) | coding (313/969 nt) | PP_5212 | iron‑sulfur‑binding oxidoreductase |
GTTCACGCCCGGCATGTGGCGCGGACGCCAGCGAGAAGGCTGCCTGCTTGCCGCCCTCACGTTCGATCATCAGGTATTGCCCCGCGTGGTAGCGCAGAGGCTTGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5945145‑5945253 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcGGCGACGTCTGGCGGGTGCGCCTGCGTGCGCCTGCCGGCAA < NC_002947/5945286‑5945246 GTTCACGCCCGGCATGTGGCGCGGACGCCAGCGAGAAGGCTGCCTGCTTGCCGCCCTCACGTTCGATCATCAGGTATTGCCCCGCGTGGTAGCGCAGAGGCTTGCCGGCGGCGACGTCTGGCGGGTGCGCCTGCGTGCGCCTGCCGGCAA < 1:543798/150‑1 GTTCACGCCCGGCATGTGGCGCGGACGCCAGCGAGAAGGCTGCCTGCTTGCCGCCCTCACGTTCGATCATCAGGTATTGCCCCGCGTGGTAGCGCAGAGGCTTGCCGGCGGCGACGTCTGGCGGGTGCGCCTGCGTGCGCCTGCCGGCAA > 2:543798/1‑150 TCAGGTATTGCCCCGCGTGGTAGCGCAGAGGCTTGCCGGCGGCGACGTCTGGCGGGTGCGCCTGCGTGCGCCTGCCG < 1:130502/77‑1 TCAGGTATTGCCCCGCGTGGTAGCGCAGAGGCTTGCCGGCGGCGACGTCTGGCGGGTGCGCCTGCGTGCGCCTGCCG > 2:130502/1‑77 GTTCACGCCCGGCATGTGGCGCGGACGCCAGCGAGAAGGCTGCCTGCTTGCCGCCCTCACGTTCGATCATCAGGTATTGCCCCGCGTGGTAGCGCAGAGGCTTGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5945145‑5945253 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcGGCGACGTCTGGCGGGTGCGCCTGCGTGCGCCTGCCGGCAA < NC_002947/5945286‑5945246 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |