| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6032808 = | 24 (0.810) | 8 (0.370) | 7/180 | NT | 36.8% | intergenic (+16/+120) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein |
| ? | NC_002947 | 6032890 = | 10 (0.460) | intergenic (+98/+38) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein | |||||
ATCATCATTGGTGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑A‑CTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6032987‑6032808‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAACGA > NC_002947/6032890‑6033035 ATCATCATTGGTGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑A‑CTGCGAGGCTGGCGC > 1:33502/1‑150ATCATCATTGGTGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑A‑CTGCCAGGCTGGCGC > 1:789130/1‑150 ctATTGGTGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑A‑CTGCCAGGCTGGCGCTACC < 1:443707/148‑1 TTGGTGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTAACGGGCAAGCCTCA‑A‑CAGCCAGGCTTGCGCAACCCag > 2:443707/1‑148 GATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCA‑GCCTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGA > 1:505194/1‑150 GTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGC‑CTGGCA‑GTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGA < 2:505194/150‑1 ATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGC‑CTGGCA‑GTTGACGCTACCCCTGTAGGAGCGG > 1:782019/1‑119 ATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGC‑CTGGCA‑GTTGACGCTACCCCTGTAGGAGCGG < 2:782019/119‑1 TGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑A‑CTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGT < 1:101096/112‑1 TGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑A‑CTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGT > 2:101096/1‑112 GTAGCGTCA‑A‑CTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGAT > 1:29873/1‑150 GTAGCGTCA‑A‑CTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAA > 1:439065/1‑77 GTAGCGTCA‑A‑CTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAA < 2:439065/77‑1 GCGTCA‑A‑CTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATC < 1:344898/121‑1 GCGTCA‑A‑CTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATC > 2:344898/1‑121 GCGTCA‑A‑CTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAA < 1:462736/74‑1 GCGTCA‑A‑CTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAA > 2:462736/1‑74 CCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATC > 1:34221/1‑150 GCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCC > 1:92245/1‑150 gggtaaACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCC > 2:731246/7‑150 TACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTT > 2:596653/1‑150 CCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCAT > 1:768625/1‑76 CCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCAT < 2:768625/76‑1 CCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAA > 2:749765/1‑150 CCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAA > 1:205736/1‑150 CCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCACATACCTATTGATGATGTGATACAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAA > 1:407370/1‑150 CGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGAT > 1:290757/1‑104 CGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGAT < 2:290757/104‑1 GCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAACG > 2:57778/1‑150 GCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAACG > 1:569671/1‑150 CGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAACGA < 1:731246/150‑1 ATCATCATTGGTGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGTCTGAGGGAGTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCA‑A‑CTGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6032987‑6032808‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAACGA > NC_002947/6032890‑6033035 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |