| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6032808 = | 24 (0.810) | 8 (0.370) | 7/180 | NT | 36.8% | intergenic (+16/+120) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein |
| ? | NC_002947 | 6032890 = | 10 (0.460) | intergenic (+98/+38) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein | |||||
GGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAACGA > NC_002947/6032741‑6033035 | ggTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGaaa < 1:129183/150‑1 (MQ=255) gtggattgtggtctgagggagtactgagagccttatagggtcagtaccggcctcttcgcgggtaaacccgctcctacaggggtagcgccagcctggcagttgacgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGa < 2:505194‑M2/14‑1 (MQ=255) aTTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAgg < 1:328483/150‑1 (MQ=255) acggtgacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTccc > 2:33502/1‑150 (MQ=255) tgacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCACGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAg > 1:3771/1‑150 (MQ=255) tcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCAAC‑TGCCAG‑GCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCAc < 2:505194‑M1/136‑1 (MQ=255) ccTGTTCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAG‑T‑TGACGCTCCCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCag < 2:547126/150‑2 (MQ=255) cGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGCAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCGTCAGACCACACTCCACCCCTGCt > 1:99443/1‑150 (MQ=255) ccTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGa < 2:692812/100‑1 (MQ=255) ccTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGa > 1:692812/1‑100 (MQ=255) tctTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGAcc > 2:784561/1‑150 (MQ=255) TCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCAAC‑TGCCAGGC‑TGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATc > 1:505194‑M1/1‑150 (MQ=255) ACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCa < 1:101096‑M1/112‑1 (MQ=255) ACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCa > 2:101096‑M1/1‑112 (MQ=255) CCGCTCCTACAGGGGTAGCGTCAAC‑TGCCAG‑GCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAAt < 2:782019‑M1/119‑1 (MQ=255) CCGCTCCTACAGGGGTAGCGTCAAC‑TGCCAG‑GCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAAt > 1:782019‑M1/1‑119 (MQ=255) ctGGGTTGCGCAAGCCTGGCTG‑T‑TGAGGCTTGCCCGTTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCaa > 2:443707‑M1/3‑150 (MQ=255) GGTAGCGCCAGCCTGGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACcaatag < 1:443707‑M1/150‑3 (MQ=255) gtagcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaGAGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgat > 1:29873‑M2/56‑150 (MQ=255) gtagcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATaa > 1:439065‑M2/56‑77 (MQ=255) gtagcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATaa < 2:439065‑M2/22‑1 (MQ=255) GCGCCAGCCTGGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatgat > 1:789130‑M1/1‑150 (MQ=255) GCGCCAGCCTCGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatgat > 1:33502‑M1/1‑150 (MQ=255) gcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATaa < 1:462736‑M2/22‑1 (MQ=255) gcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATaa > 2:462736‑M2/53‑74 (MQ=255) gcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATc < 1:344898‑M2/69‑1 (MQ=255) gcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATc > 2:344898‑M2/53‑121 (MQ=255) ccAGCCTGGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGAtgtg > 2:151162/1‑150 (MQ=255) cTGGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCa < 2:3771/150‑1 (MQ=255) t‑tGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCa > 1:470189/1‑67 (MQ=255) t‑tGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCa < 2:470189/67‑1 (MQ=255) ccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACatcaatc > 1:34221‑M2/28‑150 (MQ=255) gcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGcc > 1:92245‑M2/18‑150 (MQ=255) gggtaaacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGcccc > 2:731246‑M2/16‑150 (MQ=255) tacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCtt > 2:596653‑M2/11‑150 (MQ=255) cccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCAt < 2:768625‑M2/68‑1 (MQ=255) cccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCAt > 1:768625‑M2/9‑76 (MQ=255) ccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCaa > 1:205736‑M2/8‑150 (MQ=255) ccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCaa > 2:749765‑M2/8‑150 (MQ=255) ccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCACATACCTATTGATGATGTGATACAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCaa > 1:407370‑M2/8‑150 (MQ=255) cgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatgat < 2:290757‑M2/98‑1 (MQ=255) cgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatgat > 1:290757‑M2/7‑104 (MQ=255) gcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAACg > 1:569671‑M2/6‑150 (MQ=255) gcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAACg > 2:57778‑M2/6‑150 (MQ=255) cgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAACGa < 1:731246‑M2/146‑1 (MQ=255) | GGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAG‑T‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAACGA > NC_002947/6032741‑6033035 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |