New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1928935 =	42 (1.420)	4 (0.140)	4/234	NT	9.6%	coding (1199/2154 nt)	PP_1728	membrane protein
	?	NC_002947	1928987 =	35 (1.250)					coding (1147/2154 nt)	PP_1728	membrane protein

CGCAGGCTGATGTCATGGCCGTCGCCCTCGGCGAAGCTGATCATCGACACGCCCCACACGCGCAGGCCCAACTCGATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTGCACATCAGCGACTGGCGCAGGGCGGTGCTGGTGTCGCCGGCGGAGACGAAGGT  >  NC_002947/1928791‑1929074                                                                                                                                                 |                                                                                                                                            tcggcagcttctggttcattccggcgctgattctggtggccatttcgctgttcgccaccttcgtctccgccggcgacaccagcaccgccctgcgccagtcgctgatgtgcaccgtgctggtggtggtgtgcatggtgctcaacgGCCTgg                                                                                                                                        <  1:455230‑M1/6‑1 (MQ=255)          aTGTCATGGCCGTCGCCCTCGGCGAAGCTGATCATCGACACGCCCCACACGCGCAGGCCCAACTCGATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTg                                                                                                                               <  1:200112/150‑1 (MQ=255)                  gCCGTCGCCCTCGGCGAAGCTGATCATCGACACGCCCCACACGCGCAGGCCCAACTCGATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCtt                                                                                                                       >  2:441130/1‑150 (MQ=255)                     gTCGCCCTCGGCGAAGCTGATCATCGACACGCCCCACACGCGCAGGCCCAACTCGATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTggg                                                                                                                    <  2:731020/150‑1 (MQ=255)                        gCCCTCGGCGAAGCTGATCATCGACACGCCCCACACGCGCAGGCCCAACTCGATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGtt                                                                                                                 <  1:394953/150‑1 (MQ=255)                         cccTCGGCGAAGCTGATCATCGACACGCCCCACACGCGCAGGCCCAACTCGATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGc                                                                                                                             >  1:726016/1‑137 (MQ=255)                         cccTCGGCGAAGCTGATCATCGACACGCCCCACACGCGCAGGCCCAACTCGATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGc                                                                                                                             <  2:726016/137‑1 (MQ=255)                              ggCGAAGCTGATCATCGACACGCCCCACACGCGCAGGCCCAACTCGATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTggcggc                                                                                                           >  1:573988/1‑150 (MQ=255)                                    gCTGATCATCGACACGCCCCACACGCGCAGGCCCAACTCGATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCg                                                                                                     >  2:273307/1‑150 (MQ=255)                                           atcGACACGCCCCACACGCGCAGGCCCAACTCGATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCAcc                                                                                              >  1:395299/1‑150 (MQ=255)                                                   gCCCCACACGCGCAGGCCCAACTCGATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTg                                                                                                                <  1:659351/124‑1 (MQ=255)                                                   gCCCCACACGCGCAGGCCCAACTCGATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTg                                                                                                                >  2:659351/1‑124 (MQ=255)                                                   gCCCCACACGCGCAGGCCCAACTCGATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGtt                                                                                      >  2:455230/1‑150 (MQ=255)                                                          acGCGCAGGCCCAACTCGATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCAcc                                                                               <  2:573988/150‑1 (MQ=255)                                                                  gCCCAACTCGATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCacac                                                                       <  2:395299/150‑1 (MQ=255)                                                                           gacaccagcaccgccctgcgccagtcgctgatgtgcaccgtgctggtggtggtgtgcatggtgctcaacgGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCAc                                                                                               >  1:38798‑M1/71‑117 (MQ=255)                                                                           gacaccagcaccgccctgcgccagtcgctgatgtgcaccgtgctggtggtggtgtgcatggtgctcaacgGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCAc                                                                                               <  2:38798‑M1/47‑1 (MQ=255)                                                                             tGAACACCAGCCAGATGAACAGGTGCACCCGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCAACAGGCCGTTGAGCACCATGCACACCACCACCAGcc                                                            >  2:363386/1‑149 (MQ=255)                                                                                 cacCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGt                                                        <  1:510356/150‑1 (MQ=255)                                                                                    cagccagATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTGca                                                     <  2:421883/150‑1 (MQ=255)                                                                                      gccagATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCCGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTAcaaa                                                   >  1:83673/1‑148 (MQ=255)                                                                                       ccagATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTGCACAt                                                  >  1:629813/1‑150 (MQ=255)                                                                                          gATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTGCACATCAg                                               >  1:291074/1‑150 (MQ=255)                                                                                              aaCAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTggc                                                                                                              >  1:779018/1‑83 (MQ=255)                                                                                              aaCAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTggc                                                                                                              <  2:779018/83‑1 (MQ=255)                                                                                              aaCAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTGCACATCAGCGAc                                           <  1:273307/150‑1 (MQ=255)                                                                                                  gtcgctgatgtgcaccgtgctggtggtggtgtgcatggtgctcaacgGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGc                                                                                          <  2:263663‑M1/52‑1 (MQ=255)                                                                                                  gtcgctgatgtgcaccgtgctggtggtggtgtgcatggtgctcaacgGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGc                                                                                          >  1:263663‑M1/48‑99 (MQ=255)                                                                                                   gTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGca                                                                          <  2:727828/114‑1 (MQ=255)                                                                                                   gTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGca                                                                          >  1:727828/1‑114 (MQ=255)                                                                                                        ccAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTGCACATCAGCGACTGGCGCAggg                                 >  2:586769/1‑150 (MQ=255)                                                                                                         cagcagGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTGCACATCAGCGACTGGCGCAGGGc                                >  1:434693/1‑150 (MQ=255)                                                                                                          agcagGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTGCACATCAGCGACTGGCGCAGGGCg                               >  1:472914/1‑150 (MQ=255)                                                                                                               gTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTGCACATCa                                                <  2:635344/128‑1 (MQ=255)                                                                                                               gTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTGCACATCa                                                >  1:635344/1‑128 (MQ=255)                                                                                                               gTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTGCACATCAGCGACTGGCGCAGGGCGGTGCt                          <  2:377022/150‑1 (MQ=255)                                                                                                                tAGCCGCAGTTGCGCAGGCGTTCGGCCTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTGCACATCAGCGACTGGCGCAGGGCGGTGCTg                         >  2:8776/1‑150 (MQ=255)                                                                                                                  gCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCAt                                                                             >  2:120932/1‑96 (MQ=255)                                                                                                                  gCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCAt                                                                             <  1:120932/96‑1 (MQ=255)                                                                                                                   ccGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTGCACATCAGCGACTGGCGCAGGGCGGTGCTGgtg                      <  1:84071/150‑1 (MQ=255)                                                                                                                        gTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGt                                                        >  2:414689/1‑111 (MQ=255)                                                                                                                        gTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGt                                                        <  1:414689/111‑1 (MQ=255)                                                                                                                          tGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACTGTGCACATCAGCGACTGGCGCAGGGCGGTGCTGGTGTCGCcgg               <  2:291074/150‑1 (MQ=255)                                                                                                                                 gCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGc                                                                                  <  2:533459/76‑1 (MQ=255)                                                                                                                                 gCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGc                                                                                  >  1:533459/1‑76 (MQ=255)                                                                                                                                     tCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTGCACATCAGCGACTGGCGCAGGGCGGTGCTGGTGTCGCCGGCGGAGACGAAg    >  1:755395/1‑150 (MQ=255)                                                                                                                                       ggTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTGCACATCAGCGACTGGCGCAGGGCGGTGCTGGTGTCGCCGGCGGAGACGAAGGt  <  2:629813/150‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                            CGCAGGCTGATGTCATGGCCGTCGCCCTCGGCGAAGCTGATCATCGACACGCCCCACACGCGCAGGCCCAACTCGATGAACACCAGCCAGATGAACAGGTGCACCAGCAGGTAGCCGAAGTTGCGCAGGCGTTCGGTGTACACCGCCTGGCGCTTGCTGGCCCGCTTGGGGTTGGCGGCATGGCGTCGCACCAGGCCGTTGAGCACCATGCACACCACCACCAGCACGGTGCACATCAGCGACTGGCGCAGGGCGGTGCTGGTGTCGCCGGCGGAGACGAAGGT  >  NC_002947/1928791‑1929074

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.