New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2209598	36 (1.220)	6 (0.220)	6/228	NT	14.4%	coding (871/948 nt)	PP_1952	metallo‑beta‑lactamase family protein
	?	NC_002947	= 2209615	38 (1.390)					coding (888/948 nt)	PP_1952	metallo‑beta‑lactamase family protein

GCGTTACGTCACCCGGAGTGGAAGATCAGCTATGACACTGACTCTGACCTTTCCGTAACGTCACGCCGACGTATCCTGGACTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGA  >  NC_002947/2209469‑2209760                                                                                                                                                   |                                                                                                                                                  gCGTTACGTCACCCGGAGTGGAAGATCAGCTATGACACTGACTCTGACCTTTCCGTAACGTCACGCCGACGTATCCTGGACTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCgcc                                                                                                                                                >  2:279318‑M2/1‑147 (MQ=255)                   tGGAAGATCAGCTATGACACTGACTCTGACCTTTCCGTAACGTCACGCCGACGTATCCTGGACTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTAt                                                                                                                              >  2:118122/1‑150 (MQ=255)                     gAAGATCAGCTATGACACTGACTCTGACCTTTCCGTAACGTCACGCCGACGTATCCTGGACTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACg                                                                                                                                   >  2:684295/1‑143 (MQ=255)                     gAAGATCAGCTATGACACTGACTCTGACCTTTCCGTAACGTCACGCCGACGTATCCTGGACTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACg                                                                                                                                   <  1:684295/143‑1 (MQ=255)                      aaGATCAGCTATGACACTGACTCTGACCTTTCCGTAACGTCACGCCGACGTATCCTGGACTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGc                                                                                                                           <  1:245356/150‑1 (MQ=255)                          tCAGCTATGACACTGACTCTGACCTTTCCGTAACGTCACGCCGACGTATCCTGGACTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGa                                                                                                                       >  2:708648/1‑150 (MQ=255)                                       tGACTCTGACCTTTCCGTAACGTCACGCCGACGTATCCTGGACTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCgccaaggaaggtggtagccatgggtcatcaag                                                                                                                   <  2:389279‑M2/141‑33 (MQ=255)                                       tGACTCTGACCTTTCCGTAACGTCACGCCGACGTATCCTGGACTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCgccaaggaaggtggtagccatgggtcatcaag                                                                                                                   >  1:389279‑M2/1‑109 (MQ=255)                                           tctGACCTTTCCGTAACGTCACGCCGACGTATCCTGGACTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCAt                                                                                                      >  1:215375/1‑150 (MQ=255)                                               aCCTTTCCGTAACGTCACGCCGACGTATCCTGGACTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCt                                                                                                  >  1:182206/1‑150 (MQ=255)                                                 cTTTCCGTAACGTCACGCCGACGTATCCTGGCCTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTAt                                                                                                <  2:99909/150‑1 (MQ=255)                                                       gTAACGTCACGCCGACGTATCCTGGACTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATGGGCCACGTCGCCAAGGAAGGTGACg                                                                                                                                   >  1:460347/1‑109 (MQ=255)                                                       gTAACGTCACGCCGACGTATCCTGGACTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCATTGGCCTGGCATGGGCCACGTCGCCAAGGAAGGTGACg                                                                                                                                   <  2:460347/109‑1 (MQ=255)                                                                 gCCGACGTATCCTGGACTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTAt                                                                                                <  1:600259/134‑1 (MQ=255)                                                                 gCCGACGTATCCTGGACTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTAt                                                                                                >  2:600259/1‑134 (MQ=255)                                                                                  ttCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAAtt                                                               >  1:674994/1‑150 (MQ=255)                                                                                   tCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAAttt                                                              >  1:278794/1‑150 (MQ=255)                                                                                      tCGCCCAGAACCGCTTGATGGCCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTa                                                           <  2:215375/150‑1 (MQ=255)                                                                                      tCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTAt                                                                                                <  1:381243/113‑1 (MQ=255)                                                                                      tCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTAt                                                                                                >  2:381243/1‑113 (MQ=255)                                                                                      tCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTa                                                           >  1:356867/1‑150 (MQ=255)                                                                                        gCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTaa                                                          >  2:600395/1‑149 (MQ=255)                                                                                        gCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTaa                                                          <  1:600395/149‑1 (MQ=255)                                                                                        gCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAAt                                                         <  2:182206/150‑1 (MQ=255)                                                                                                   cTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTtctc                                                                                                        <  2:299648/92‑1 (MQ=255)                                                                                                   cTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTtctc                                                                                                        >  1:299648/1‑92 (MQ=255)                                                                                                             cATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCCTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGa                                    <  1:708648/150‑1 (MQ=255)                                                                                                                   tACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTaaaa                                                                                     >  1:766262/1‑95 (MQ=255)                                                                                                                   tACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTaaaa                                                                                     <  2:766262/95‑1 (MQ=255)                                                                                                                      cACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTtc                                                                                                          <  2:248448/71‑1 (MQ=255)                                                                                                                      cACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTtc                                                                                                          >  1:248448/1‑71 (MQ=255)                                                                                                                        cTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAAt                         <  2:323932/150‑1 (MQ=255)                                                                                                                         tttCCTTGGCCTGGCATAGGCCACGTCgccaaggaaagtggtagccatgggtcatcaagcggttctgggcgaggaagtccaggatacgtcggcgtgacgttacggaaaggtcagagtca                                                       >  2:743870‑M2/1‑27 (MQ=255)                                                                                                                         tttCCTTGGCCTGGCATAGGCCACGTCgccaaggaaagtggtagccatgggtcatcaagcggttctgggcgaggaagtccaggatacgtcggcgtgacgttacggaaaggtcagagtca                                                       <  1:743870‑M2/119‑93 (MQ=255)                                                                                                                          ttCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAAtgt                       <  1:118122/150‑1 (MQ=255)                                                                                                                          ttCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTAGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAAtgt                       <  2:278794/150‑1 (MQ=255)                                                                                                                           tCCTTGGCCTGGCATAGGCCACGTCgccaaggaaagtggtagccatgggtcatcaagcggttctgggcgaggaagtccaggatacgtcggcgtgacgttacggaaaggtcagagtcagtg                                                    >  1:638688‑M2/1‑25 (MQ=255)                                                                                                                           tCCTTGGCCTGGCATAGGCCACGTCgccaaggaaagtggtagccatgggtcatcaagcggttctgggcgaggaagtccaggatacgtcggcgtgacgttacggaaaggtcagagtcagtg                                                    <  2:638688‑M2/120‑96 (MQ=255)                                                                                                                              ttGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCg                   <  2:207406/150‑1 (MQ=255)                                                                                                                              ttGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCg                   >  1:207406/1‑150 (MQ=255)                                                                                                                              ttGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCg                   >  1:249477/1‑150 (MQ=255)                                                                                                                              ttGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCg                   >  1:79782/1‑150 (MQ=255)                                                                                                                                  ccTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAat               <  2:573119/150‑1 (MQ=255)                                                                                                                                       cATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATAcc          <  2:292619/150‑1 (MQ=255)                                                                                                                                         tAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCTCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGa        <  1:1630/150‑1 (MQ=255)                                                                                                                                               aCGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGa  <  2:356867/150‑1 (MQ=255)                                                                                                                                                 gTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGa                                    <  1:220304/114‑1 (MQ=255)                                                                                                                                                 gTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGa                                    >  2:220304/1‑114 (MQ=255)                                                                                                                                                   |                                                                                                                                                  GCGTTACGTCACCCGGAGTGGAAGATCAGCTATGACACTGACTCTGACCTTTCCGTAACGTCACGCCGACGTATCCTGGACTTCCTCGCCCAGAACCGCTTGATGACCCATGGCTACCACTTTCCTTGGCCTGGCATAGGCCACGTCGCCAAGGAAGGTGACGGCTATCGCTGGATCGCTTCGCCTTCTCATACCTATCTGATCTAAAACCCCTTAAAAATAGTGCGAATTTGTAATTAGACATTTCACTATACTGGAGTACAGTGAATGTGTCGGAATATACCGAGCGCGA  >  NC_002947/2209469‑2209760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.