| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5560460 | 34 (1.150) | 5 (0.180) | 5/234 | NT | 12.9% | coding (88/1188 nt) | hisZ | ATP phosphoribosyltransferase regulatory subunit |
| ? | NC_002947 | = 5560489 | 35 (1.250) | coding (59/1188 nt) | hisZ | ATP phosphoribosyltransferase regulatory subunit | |||||
GGTGCGCTGATCCAGGTCCTGGCCGGCGCCGGTAAGCAGCGACTCCAGGTACTCGATATGCGGGGTGACGACCAGTTCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGCCATTACGCCATTTCCCCTCTGGTCCGGGCGGCTTGCCAGCAGGCAAACCGTCAGAAAAGCCGGTATCGCGCACAGCAGCGGGCAGCACTGA > NC_002947/5560350‑5560635 | ggTGCGCTGATCCAGGTCCTGGCCGGCGCCGGTAAGCAGCGACTCCAGGTACTCGATATGCGGGGTGACGACCAGTTCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAg < 2:16760/150‑1 (MQ=255) gcgcTGATCCAGGTCCTGGCCGGCGCCGGTAAGCAGCGACTCCAGGTACTCGATATGCGGGGTGACGACCAGTTCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTAc < 2:655018/150‑1 (MQ=255) cAGGTCCTGGCCGGCGCCGGTAAGCAGCGACTCCAGGTACTCGATATGCGGGGTGACGACCAGTTCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGAt < 1:296940/150‑1 (MQ=255) gcagcGACTCCAGGTACTCGATATGCGGGGTGACGACCAGTTCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGAt < 2:540090/127‑1 (MQ=255) gcagcGACTCCAGGTACTCGATATGCGGGGTGACGACCAGTTCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGAt > 1:540090/1‑127 (MQ=255) cagcGACTCCAGGTACTCGATATGCGGGGTGACGACCAGTTCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCTCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTc < 1:717875/150‑1 (MQ=255) agcGACTCCAGGTACTCGATATGCGGGGTGACGACCAGTTCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGAt < 2:64793/125‑1 (MQ=255) agcGACTCCAGGTACTCGATATGCGGGGTGACGACCAGTTCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGAt > 1:64793/1‑125 (MQ=255) cTCCAGGTACTCGATATGCGGGGTGACGACCAGTTCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGt > 2:675465/1‑150 (MQ=255) cAGGTACTCGATATGCGGGGTGACGACCAGTTCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGc < 1:675465/150‑1 (MQ=255) gacCAGTTCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCTGGACCCCCTCGTTGCCATCTGGCAGCAGCCAACGCACTACCGATGCAATTACACCATGTTCCCCCTGGTc > 1:13696/1‑150 (MQ=255) gacCAGTTCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCgg < 1:192681/115‑1 (MQ=255) gacCAGTTCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCgg > 2:192681/1‑115 (MQ=255) gacCAGTTCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGCCATTACGCCATTTCCCCTCTGGTc > 1:717032/1‑150 (MQ=255) ttCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTc > 2:631091/1‑84 (MQ=255) ttCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTc < 1:631091/84‑1 (MQ=255) ccccAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCg < 1:654207/101‑1 (MQ=255) ccccAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCg > 2:654207/1‑101 (MQ=255) ccAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGCCATTAc < 1:777278/117‑1 (MQ=255) ccAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGCCATTAc > 2:777278/1‑117 (MQ=255) ccAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGCCATTACGCCATTTCCCCTCTGGTCCGGGCGGCTTGCca < 2:513664/149‑1 (MQ=255) ccAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGCCATTACGCCATTTCCCCTCTGGTCCGGGCGGCTTGCca > 1:513664/1‑149 (MQ=255) aCTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGCCATTACGCCATTTCCCCTCTGGTCCGGGCGGCTTGCcagcag < 2:281474/150‑1 (MQ=255) tGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGCCATTACGCCATTTCCCCTCTGGTCCGGGCGGCTTGCCAGCAGGCaa < 2:708643/150‑1 (MQ=255) gAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGCCATTACGCCATTTCCCCTCTGGTCCGGGCGGCTTGCCAGCAGGCAAAc > 1:114097/1‑150 (MQ=255) aGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCgg > 1:261923/1‑87 (MQ=255) aGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCgg < 2:261923/87‑1 (MQ=255) tCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGTTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTc > 2:551446/1‑86 (MQ=255) tCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTc < 1:551446/86‑1 (MQ=255) cAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTcaggtgttggacctgttccagagttggggctacgaactggtcgtcaccccgcatatcgagtacctggagtcgctgcttaccggcgccggccaggacctggatcagcgcacct < 1:556642‑M2/150‑113 (MQ=255) aaCACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTcaggtgttggacctgttccagagttggggctacgaactggtcgtcaccccgcatatcgagtacctggagtcgctgcttaccggcgccggccaggacctggatcagcgcacctt < 1:214405‑M2/150‑114 (MQ=255) acacCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGCCATTACGCCATTTCCCCTCTGGTCCGGGCGGCTTGCCAGCAGGCAAACCGTCAGAAAAg > 2:168770/1‑150 (MQ=255) acCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTcaggtgttggacctgttccagagttggggctacgaactggtcgtcaccccgcatatcgagtacctggagtcgctgcttaccggcgccggcc > 1:363256‑M2/1‑34 (MQ=255) acCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTcaggtgttggacctgttccagagttggggctacgaactggtcgtcaccccgcatatcgagcacctggagtcgctgcttaccggcgccggcc < 2:363256‑M2/125‑92 (MQ=255) ccTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGCCATTACGCCATTTCCCCTCTGGTCCGGGCGGCTTGCCAGCAGGCAAACCGTCAGAAAAGCCg < 1:523193/150‑1 (MQ=255) ggcgCGCGATCTCGATGCGCGCCGCCggtgttggacctgttccagagttggtgctacgaactggtcgtcaccccgcatatcga > 2:677824‑M2/1‑27 (MQ=255) cgATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGCCATTACGCCATTTCCCCTCTGGTCCGGGCGGCTTGCCAGCAGGCAAACCGTCAGAAAAGCCGGTAt > 2:90853/1‑142 (MQ=255) cgATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGCCATTACGCCATTTCCCCTCTGGTCCGGGCGGCTTGCCAGCAGGCAAACCGTCAGAAAAGCCGGTAt < 1:90853/142‑1 (MQ=255) tcGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGCCATTACGCCATTTCCCCTCTGGTCCGGGCGGCTTGCCAGCAGGCAAACCGTCAGAAAAGCCGGTATCGCGCACagcagc < 2:114097/150‑1 (MQ=255) gATGCGCGCAGCCTCAGTTGGCAGTACTTCCTCGATGCCATCTGGCagcagc < 1:722218/52‑1 (MQ=255) gATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCagcagc > 2:722218/1‑52 (MQ=255) gCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGCCATTACGCCATTTCCCCTCTGGTCCGGGCGGCTTGCCAGCAGGCAAACCGTCAGAAAAGCCGGTATCGCGCACAGCAGCGGGCAGCACTGa < 1:168770/150‑1 (MQ=255) | GGTGCGCTGATCCAGGTCCTGGCCGGCGCCGGTAAGCAGCGACTCCAGGTACTCGATATGCGGGGTGACGACCAGTTCGTAGCCCCAACTCTGGAACAGGTCCAACACCTGGCGGCGCGCGATCTCGATGCGCGCAGCCTCAGGTGGCAGTACTTCCTCGATGCCATCTGGCAGCAGCCAGCGGTCTACCGTTGCCATTACGCCATTTCCCCTCTGGTCCGGGCGGCTTGCCAGCAGGCAAACCGTCAGAAAAGCCGGTATCGCGCACAGCAGCGGGCAGCACTGA > NC_002947/5560350‑5560635 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |