New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5756149	30 (1.020)	4 (0.140)	3/238	NT	10.7%	coding (1207/1437 nt)	glnG	two‑component system DNA‑binding response regulator GlnL/GlnG
	?	NC_002947	= 5756181	38 (1.330)					coding (1239/1437 nt)	glnG	two‑component system DNA‑binding response regulator GlnL/GlnG

ATCACCGTGATGGCCTCCAGCCGCGAAGTGCTGATCGGCGACCTGCCACCAGAACTGCTGAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGTTGCTGGGTTGGGGGCGCAATACCCTGACGCGC  >  NC_002947/5756044‑5756316                                                                                                                                          |                                                                                                                                        aTCACCGTGATGGCCTCCAGCCGCGAAGTGCTGATCGGCGACCTGCCACCAGAACTGCTGAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGc                                                                                                                             <  1:371034/150‑1 (MQ=255)              ccTCCAGCCGCGAAGTGCTGATCGGCGACCTGCCACCAGAACTGCTGAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTggctggcg                                                                                                                <  2:198912/150‑7 (MQ=255)              ccTCCAGCCGCGAAGTGCTGATCGGCGACCTGCCACCAGAACTGCTGAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAgcg                                                                                                                <  2:649324/150‑1 (MQ=255)                   aGCCGCGAAGTGCTGATCGGCGACCTGCCACCAGAACTGCTGAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTg                                                                                                           <  1:667577/150‑1 (MQ=255)                       gcgAAGTGCTGATCGGCGACCTGCCACCAGAACTGCTGAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGa                                                                                                       <  1:527045/150‑1 (MQ=255)                                                       ctgctgAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTc                                                                       <  1:80567/150‑1 (MQ=255)                                                          ctgAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAg                                                                    >  1:383558/1‑150 (MQ=255)                                                            gAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGca                                                                  <  1:305611/150‑1 (MQ=255)                                                             aaCCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAAc                                                                                              >  1:116057/1‑121 (MQ=255)                                                             aaCCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAAc                                                                                              <  2:116057/121‑1 (MQ=255)                                                              aCCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGcaca                                                                >  1:571948/1‑150 (MQ=255)                                                                    cacaCGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACAccgccg                                                          >  2:255865/1‑150 (MQ=255)                                                                       acGATGCCGCGCCGGTAACCAACCGGGAGCAGGCCCTGCGCCAGTGTGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCgccggcc                                                       <  1:287964/150‑1 (MQ=255)                                                                          aTGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGgccgcc                                                    >  1:457354/1‑150 (MQ=255)                                                                               gcgcCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTcgc                                               >  1:150425/1‑150 (MQ=255)                                                                                  ccGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCAAAATCAAGACGGCACTCAAGCACACCGCCGACCGCCGTCGCGAt                                            >  2:240983/1‑150 (MQ=255)                                                                                          cAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACg                                                                             >  1:433334/1‑109 (MQ=255)                                                                                          cAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACg                                                                             <  2:433334/109‑1 (MQ=255)                                                                                           aaCTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTg                                   >  2:737451/1‑150 (MQ=255)                                                                                              tGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGTTg                                >  1:539354/1‑150 (MQ=255)                                                                                              tGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGTTg                                >  1:637535/1‑150 (MQ=255)                                                                                               gggAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCATGCTGGACAGCGAAGAGGCTAGTTTTGAACGGCTCATGATCGGCACGGTGCTCAAGGAGACCGGCGGCCGCCGTCGCGATGCTGCGCTGTTGc                               >  1:377086/1‑150 (MQ=255)                                                                                                  aGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGTTGCTgg                            <  2:457354/150‑1 (MQ=255)                                                                                                       gCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCgggcctgctcccagttggttaccggcgcggcatcgtgtggcaggttcagca                                                                                      >  2:400315‑M2/1‑36 (MQ=255)                                                                                                       gCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCgggcctgctcccagttggttaccggcgcggcatcgtgtggcaggttcagca                                                                                      <  1:400315‑M2/87‑52 (MQ=255)                                                                                                       gCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCt                                                                                                    <  2:504072/73‑1 (MQ=255)                                                                                                       gCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCt                                                                                                    >  1:504072/1‑73 (MQ=255)                                                                                                       gCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGTTGCTGGGTTgg                       <  1:631271/150‑1 (MQ=255)                                                                                                        cccTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGCGGCGATGCTGCGCTGTTGCTGGGTTggg                      <  1:743892/150‑1 (MQ=255)                                                                                                         ccTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCgggcctgctcccagttggttaccggcgcggcatcgtgtggcaggttcagcagttctggtggcaggtcgccgatcagcacttcgcggctggaggccatcacggtgattcagcggcag                     <  1:793343‑M2/150‑117 (MQ=255)                                                                                                         ccTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGa                                                                                                       >  1:655196/1‑68 (MQ=255)                                                                                                         ccTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGa                                                                                                       <  2:655196/68‑1 (MQ=255)                                                                                                         ccTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGgccgcc                                                    >  2:402145/1‑119 (MQ=255)                                                                                                         ccTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGgccgcc                                                    <  1:402145/119‑1 (MQ=255)                                                                                                         ccTGCGCCAGTGGGCCGACCAGGCCTTGGCGCAggcctgctcccagttggttaccggcgcggcatcgtgtggcaggttcagcagttctggtggcaggtcgccgatcagcacttcgcggctggaggccatcacggtgatccagcggcagg                      <  1:377602‑M2/150‑117 (MQ=255)                                                                                                          cTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGtt                                 >  2:109271/1‑137 (MQ=255)                                                                                                          cTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGtt                                 <  1:109271/137‑1 (MQ=255)                                                                                                                          aCCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACgg                                                                            <  2:362662/78‑1 (MQ=255)                                                                                                                          aCCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACgg                                                                            >  1:362662/1‑78 (MQ=255)                                                                                                                           ccAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTcg                                                >  1:516465/1‑105 (MQ=255)                                                                                                                           ccAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTcg                                                <  2:516465/105‑1 (MQ=255)                                                                                                                            cAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGTTGCTGGGTTGGGGGCGCAATACCCTGACgcgc  >  2:774844/1‑150 (MQ=255)                                                                                                                                          |                                                                                                                                        ATCACCGTGATGGCCTCCAGCCGCGAAGTGCTGATCGGCGACCTGCCACCAGAACTGCTGAACCTGCCACACGATGCCGCGCCGGTAACCAACTGGGAGCAGGCCCTGCGCCAGTGGGCCGACCAGGCCTTGGCGCGCGGGCAGACCAGCCTGCTGGACAGCGCAGTGCCGAGCTTTGAACGGATCATGATCGAGACGGCACTCAAGCACACCGCCGGCCGCCGTCGCGATGCTGCGCTGTTGCTGGGTTGGGGGCGCAATACCCTGACGCGC  >  NC_002947/5756044‑5756316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.