New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5971629	15 (0.510)	5 (0.180)	5/236	NT	24.8%	coding (153/222 nt)	PP_5237	hypothetical protein
	?	NC_002947	= 5971643	16 (0.560)					coding (167/222 nt)	PP_5237	hypothetical protein

TTCTTTGCCCAGCCGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATGGCAGTCAG  >  NC_002947/5971507‑5971792                                                                                                                                         |                                                                                                                                                      ttCTTTGCCCAGCCGCAGGAAGCGGCATTTTCCAGCAACAACGGATTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTg                                                                                                                                          <  1:568511/150‑1 (MQ=255)                cgtgAAGCGGCAGTGTCCAGCAACAACGCAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGGCTGTCGCGGAAGTTGCGCCCGGTGACGAgc                                                                                                                           <  2:442119/147‑1 (MQ=17)                                 cAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGtt                                                                                                          <  1:544298/150‑1 (MQ=255)                                          cGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATa                                                                                                 <  1:524291/150‑1 (MQ=255)                                                  tCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCaaa                                                                                         >  2:214968/1‑150 (MQ=255)                                                    aTGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCaaaaa                                                                                       >  1:609192/1‑150 (MQ=255)                                                      gTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTgc                                                                                                                                         <  1:770491/98‑1 (MQ=255)                                                      gTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTgc                                                                                                                                         >  2:770491/1‑98 (MQ=255)                                                       tctcTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTc                                                                                    >  2:280931/1‑150 (MQ=255)                                                                   gTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACg                                                                        >  2:36426/1‑150 (MQ=255)                                                                         aGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGt                                                                  <  2:116661/150‑1 (MQ=255)                                                                                             gCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCcac                                              <  2:609192/150‑1 (MQ=255)                                                                                                    ccGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGc                                       >  2:620445/1‑150 (MQ=255)                                                                                                           tCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATac                                >  1:601403/1‑150 (MQ=255)                                                                                                                   gAAACCGACCTGGCTAACGGCCTgtcggtttcgacgctgaccgccggtgcctgcacgcctacctgggcgcggctgtggacgagggctagagacatgaacac                                                                         >  1:501104‑M2/1‑23 (MQ=255)                                                                                                                   gAAACCGACCTGGCCAACGGCCTgtcggtttcgacgctgaccgccggtgcctgcacgcctacctgggcgcggctgtggacgagggctagagacatgaacac                                                                         <  2:501104‑M2/101‑79 (MQ=255)                                                                                                                       ccGACCTGGCCAACGGCCTgtcggtttcgacgctgaccgccggtgcctgcacgcctacctgggcgcgg                                                                                                      <  1:382596‑M2/68‑50 (MQ=255)                                                                                                                       ccGACCTGGCCAACGGCCTgtcggtttcgacgctgaccgccggtgcctgcacgcctacctgggcgcgg                                                                                                      >  2:382596‑M2/1‑19 (MQ=255)                                                                                                                        cGACCTGGCCAACGGCCTgtcggtttcgacgctgaccgccggtgcctgcacgcctacctgggcgcggctgtggacgagggctagagacatgaacactccgttgttgctggaaaatgccgcttcctgcggctgggcaaagaatagccagtg                   <  1:206614‑M2/150‑133 (MQ=255)                                                                                                                          aCCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCAtttt                 <  1:620445/150‑1 (MQ=255)                                                                                                                                    cGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATGGCa       <  1:214968/150‑1 (MQ=255)                                                                                                                                        cTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATGGCAGTCa   >  2:117783/1‑150 (MQ=255)                                                                                                                                         tGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATGGCAGTCAg  <  1:36426/150‑1 (MQ=255)                                                                                                                                         |                                                                                                                                                      TTCTTTGCCCAGCCGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATGGCAGTCAG  >  NC_002947/5971507‑5971792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.