New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 35966552 (1.360)14 (0.390) 13/262 2.0 23.5% intergenic (+22/+98) gbdR/PP_0299 AraC family transcriptional regulator/hypothetical protein
?NC_002947 = 359732 42 (1.170)intergenic (+89/+31) gbdR/PP_0299 AraC family transcriptional regulator/hypothetical protein

CAACACCGCGCAGCAGGTGGCCATGATGCCGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGAACTGCGCCAACGCTGGCAACAGTTGCTTGTCG  >  NC_002947/359517‑359811
                                                                                                                                                    |                                                                                                                                                  
cAACACCGCGCAGCAGGTGGCCATGATGCCGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCggg                                                                                                                                                   >  1:759563/1‑150 (MQ=255)
cAACACCGCGCAGCAGGTGGCCATGATGCCGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGa                                                                                                                                                   >  1:471246‑M1/1‑149 (MQ=255)
 aaCACCGCGCAGCAGGTGGCCATGATGCCGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGaa                                                                                                                                                  >  2:680560‑M1/1‑148 (MQ=255)
 aaCACCGCGCAGCAGGTGGCCATGATGCCGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGc                                                                                                                                                  >  1:252315/1‑150 (MQ=255)
   cacCGCGCAGCAGGTGGCCATGATGCCGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCAc                                                                                                                                                >  1:678010/1‑150 (MQ=255)
    acCGCGCAGCAGGTGGCCATGATGCCGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACg                                                                                                                                               >  2:704262/1‑150 (MQ=255)
     ccGCGCAGCAGGTGGCCATGATGCCGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGAGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGc                                                                                                                                              <  1:309029/150‑1 (MQ=255)
      cgcgCAGCAGGTGGCCATGATGCCGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGcc                                                                                                                                             >  1:618811/1‑150 (MQ=255)
      cgcgCAGCAGGTGGCCATGATGCCGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGcc                                                                                                                                             >  2:140188/1‑150 (MQ=255)
       gcgcAGCAGGTGGCCATGTTGCCGATTCCGCGGGCCACAACCCTGTCGCCACACAGCGTGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGccc                                                                                                                                            <  2:740254/150‑1 (MQ=255)
         gcagcaGGTGGCCATGATGCCGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGaacaagcccg                                                                                                                                          <  1:680560‑M1/150‑11 (MQ=255)
                gTGGCCATGATGCCGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCcaca                                                                                                                                   >  1:102356/1‑150 (MQ=255)
                gTGGCCATGATGCCGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCcaca                                                                                                                                   <  1:681993/150‑1 (MQ=255)
                      atgatgCCGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTGTGACACCGCGCCGGCCCCTTCGCGGaacaagcccgcccccacagatca                                                                                                                             <  2:810962‑M1/150‑24 (MQ=255)
                             cGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGa                                                                                                                      <  2:102356/150‑1 (MQ=255)
                             cGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGa                                                                                                                      <  1:140188/150‑1 (MQ=255)
                              gcttCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGCTAGCGGCCCTGCGCCAGGAGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAg                                                                                                                     >  2:276642/3‑150 (MQ=255)
                                   cGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGa                                                                                                                <  2:759563/150‑1 (MQ=255)
                                          cATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCg                                                                                                         <  1:674443/150‑1 (MQ=255)
                                           aTGACCCTGTCGACGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGCTAGTGGGTGAATTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCgg                                                                                                        <  1:476129/150‑1 (MQ=38)
                                              aCCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCGATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGgcacgcccgctcccacagatcaccgctggctcaagctcagcgggtga                                                                                                     <  1:287549‑M1/150‑48 (MQ=255)
                                               cccTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGG                                                                                                                                                    <  1:475339‑M1/102‑1 (MQ=255)
                                               cccTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGG                                                                                                                                                    >  2:475339‑M1/1‑102 (MQ=255)
                                                ccTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATc                                                                                                   >  2:32776/1‑150 (MQ=255)
                                                ccTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATc                                                                                                   >  1:727951/1‑150 (MQ=255)
                                                 cTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCt                                                                                                  >  2:203238/1‑150 (MQ=255)
                                                    tCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCACACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCtgtg                                                                                               <  1:869220/150‑1 (MQ=255)
                                                     cgccgcACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTgg                                                                                              <  1:32776/150‑1 (MQ=255)
                                                       ccgcACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTgggg                                                                                            >  2:318282/1‑150 (MQ=255)
                                                           acaGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGgggcgg                                                                                        <  1:749047/150‑1 (MQ=255)
                                                            caGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGgggcggg                                                                                       <  1:134262/150‑1 (MQ=255)
                                                              gCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCt                                                                                     <  1:203238/150‑1 (MQ=255)
                                                                        ggcggcCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGgcaagcccgcccccacagatcaccgctggctcaagctcagcgggtgacctgtgggagcgggcgtgcccgcgaa                                                                           <  2:156279‑M1/150‑74 (MQ=255)
                                                                            gcCCTGAGCCAGGCGCGCAATCAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGaacaagcccgcccccacagatcaccgctggctcaagctcagcgggtgacctgtgggagcaggcgtgcccgcgaagag                                                                       <  2:471246‑M1/150‑78 (MQ=255)
                                                                             cccTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCtt                                                                                    >  2:631599/1‑136 (MQ=255)
                                                                             cccTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCtt                                                                                    <  1:631599/136‑1 (MQ=255)
                                                                              ccTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCCCTTCGCGGaacaagcccgcccccacagatcaccgctggctcaagctcagcgggtgacctgtgggagcgggcgtgcccgcgaagaggc                                                                     <  1:609469‑M1/150‑80 (MQ=255)
                                                                              ccTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCCCTTCGCGGaacaagcccgcccccacagatcaccgctggctcaagctcagcgggtgacctgtgggagcgggcgtgcccgcgaagaggc                                                                     <  2:862840‑M1/150‑80 (MQ=255)
                                                                                   gCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGacaagcccgcccccacagatcaccgctggctcaagctcagcgggtgacctgtgggagcgggcgtgcccgcgaagaggccggcgc                                                                <  2:823665‑M1/150‑85 (MQ=255)
                                                                                      aGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTg                                                             <  2:727951/150‑1 (MQ=255)
                                                                                       ggCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGGGACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTgg                                                            <  1:694575/150‑1 (MQ=255)
                                                                                       ggCGCGCAATGAGTCGACATTTGCCAGTGAACGGCTCTGTCACCGGGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTgg                                                            <  1:884997/150‑1 (MQ=255)
                                                                                                    tCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAgg                                                                        <  1:840474/125‑1 (MQ=255)
                                                                                                    tCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAgg                                                                        >  2:840474/1‑125 (MQ=255)
                                                                                                          tttGCTAGTGTAAGGCTCTGACAGCGCGCCGGCATCTTCGCGGGCACGCCCGCTCTCACAGGACACCCGCTTCGCTTGAGCCAGCGGTGATTTGTGGGGGCGGGCGTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGt                                         <  2:575093/150‑1 (MQ=255)
                                                                                                          tttGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGgcacgcccgcccccacagatcaccgctggctcaagctcagcgggtgacctgtgggagcgg                                                                                        <  1:448464‑M1/103‑61 (MQ=255)
                                                                                                          tttGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGgcacgcccgcccccacagatcaccgctggctcaagctcagcgggtgacctgtgggagcgg                                                                                        >  2:448464‑M1/1‑43 (MQ=255)
                                                                                                              ccAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCAACGACGGGGCAGGGGCTGGGTAAATTGATTGCGCGCGTttgt                                     >  2:694360/1‑150 (MQ=38)
                                                                                                               cAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGaacaagcccgcccccacagatcaccgctggctcaagctcagcgggtgac                                                                                                   >  2:858411‑M1/1‑38 (MQ=255)
                                                                                                               cAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGaacaagcccgcccccacagatcaccgctggctcaagctcagcgggtgac                                                                                                   <  1:858411‑M1/87‑50 (MQ=255)
                                                                                                                   gtAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGAAc                                >  1:164951/1‑150 (MQ=255)
                                                                                                                    tAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATGTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGAACt                               >  2:66991/1‑150 (MQ=255)
                                                                                                                           ctGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGAACTGCGCCaa                        <  2:570116/150‑1 (MQ=255)
                                                                                                                             gACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGAACTGCGCCAACg                      >  1:98630/1‑150 (MQ=255)
                                                                                                                             gACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCCCCCACAGGTCACCCGCTGGGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAGTGGATTACGCGCGTTTGTTGAACTGCGGCAACg                      >  2:303576/1‑150 (MQ=255)
                                                                                                                              acacCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGAACTGCGCCAACGc                     <  2:678010/150‑1 (MQ=255)
                                                                                                                                 ccGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGAACTgc                             >  1:767058/1‑139 (MQ=255)
                                                                                                                                 ccGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGAACTgc                             <  2:767058/139‑1 (MQ=255)
                                                                                                                                   gcgcCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTcgcgaagaggccggcgcggtgtcagagccttacactggcaaatgtcgactcattgcgcgcctggc                 <  2:823665‑M2/150‑66 (MQ=255)
                                                                                                                                      ccGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGaa                                 >  2:259451/1‑130 (MQ=255)
                                                                                                                                      ccGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGaa                                 <  1:259451/130‑1 (MQ=255)
                                                                                                                                        ggCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCGGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGAACTGCGCCAACGCTGGCAACAGt           <  2:618811/150‑1 (MQ=255)
                                                                                                                                         gCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTccgcgaaggggccggcgcggtgtcagagccttacactggcaaatgtcgactcattgcgcgcctggctcagg          <  1:609469‑M2/150‑72 (MQ=255)
                                                                                                                                         gCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTccgcgaaggggccggcgcggtgtcagagccttacactggcaaatgtcgactcattgcgcgcctggctcagg          <  2:862840‑M2/150‑72 (MQ=255)
                                                                                                                                          ccTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGAACTGCGCCAACGCTGGCAACAGTTg         <  1:318282/150‑1 (MQ=255)
                                                                                                                                           ctctTCGCGGGCACGCCTGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTccgcgaagaggccggcgcggtgtcagagccttacactggcaaatgtcgactgattgcgcgcctggctcagggc        <  2:471246‑M2/150‑74 (MQ=255)
                                                                                                                                            tctTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGAACTGCGCCAACGCTGGCAACAGTTGCt       >  1:840367/1‑150 (MQ=255)
                                                                                                                                             ctTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGAACTGCGCCAACGCTGGCAACAGTTGCtt      <  1:704262/150‑1 (MQ=255)
                                                                                                                                              ttCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGAACTGCGCCAACGCTGGCAACAGTTGCTTg     <  2:295635/150‑1 (MQ=255)
                                                                                                                                              ttCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGCcgcgaagaggccggcgcggtgtcagagccttacactggcaaatgtcgactcattgcgcgcctggctcagggccgcc      <  2:156279‑M2/150‑77 (MQ=255)
                                                                                                                                               tCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGAACTGCGCCAACGCTGGCAACAGTTGCTTGt    <  2:164951/150‑1 (MQ=255)
                                                                                                                                                cgcgGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGAACTGCGCCAACGCTGGCAACAGTTGCTTGTc   >  2:30959/1‑150 (MQ=255)
                                                                                                                                                 gcgGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATNACGCGCGTTNGTTGAACTNCGCCAACGCTGGCAACAGTTGCTTGTCg  <  1:303576/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
CAACACCGCGCAGCAGGTGGCCATGATGCCGATTCCGCAGGCCATGACCCTGTCGCCGCACAGCGGGCCGATGGCGGCCCTGAGCCAGGCGCGCAATGAGTCGACATTTGCCAGTGTAAGGCTCTGACACCGCGCCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTCACCCGCTGAGCTTGAGCCAGCGGTGATCTGTGGGGGCGGGCTTGTTCCGCGAAGGGGCCGGTCCTGGGTAAATGGATTACGCGCGTTTGTTGAACTGCGCCAACGCTGGCAACAGTTGCTTGTCG  >  NC_002947/359517‑359811

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.