| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 513455 | 16 (0.640) | 4 (0.170) | 4/246 | 2.7 | 22.3% | intergenic (‑99/‑92) | crp/yhfA | DNA‑binding transcriptional dual regulator/hypothetical protein |
| ? | NC_002947 | = 513472 | 13 (0.560) | intergenic (‑116/‑75) | crp/yhfA | DNA‑binding transcriptional dual regulator/hypothetical protein | |||||
TCTTGGCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/513329‑513455‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgagatgtGTCGGT‑TTAGTACCGAAACATCTCGTAGTGTCTGATAAGCTGGCGCCAAATGACTGGCGCTCTCCGTCAGCCAACCTCTAAAAAAGCCTATGCGTCATATCGAACAGGATTTCGTGATGGTTGCCTCCG < NC_002947/513472‑513344 TCTTGGCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTGTCGGT‑TTAGTACCGAAACATCT > 2:434594/1‑150 TTATCAGACACTACGAGATGTTTCGGTACTA‑AACCGACACATCTCGTAGTGTCTGATAAGCTGGCGCCAAATGACTGGCGCTCTCCGTCAGCCAACCTCTAAAAAAGCCTATGCGTCATATCGAACAGGATTTCGTGATGGTTGCCTCCG > 1:434594/1‑150 ACACTACGAGATGTTTCGGTACTA‑AACCGACACATCTCGTAGTGTCTGATAAGCTGGCGCCAAATGACTGGCGCTCTCCGTCAGCCAACCTCTAAAAAAGCCTATGCGT < 1:350830/109‑1 ACACTACGAGATGTTTCGGTACTA‑AACCGACACATCTCGTAGTGTCTGATAAGCTGGCGCCAAATGACTGGCGCTCTCCGTCAGCCAACCTCTAAAAAAGCCTATGCGT > 2:350830/1‑109 ACGAGATGTGTCGGT‑TTAGTACCGAAACATCTCGTAGTGTCTGATAAGCTGGCGCCAAATGACTGGCGCTCTCCGTCA < 1:138825/78‑1 ACGAGATGTGTCGGT‑TTAGTACCGAAACATCTCGTAGTGTCTGATAAGCTGGCGCCAAATGACTGGCGCTCTCCGTCA > 2:138825/1‑78 TCTTGGCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/513329‑513455‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgagatgtGTCGGT‑TTAGTACCGAAACATCTCGTAGTGTCTGATAAGCTGGCGCCAAATGACTGGCGCTCTCCGTCAGCCAACCTCTAAAAAAGCCTATGCGTCATATCGAACAGGATTTCGTGATGGTTGCCTCCG < NC_002947/513472‑513344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |