| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2329471 | 24 (0.970) | 7 (0.300) | 5/250 | 2.4 | 23.8% | coding (1016/1239 nt) | PP_2047 | 3‑hydroxyacyl‑CoA dehydrogenase family protein |
| ? | NC_002947 | = 2329476 | 22 (0.930) | coding (1021/1239 nt) | PP_2047 | 3‑hydroxyacyl‑CoA dehydrogenase family protein | |||||
GTGTCCCAGAACCTTGGCTACCGACGTCGGGGCATCAGTGCCGAGGAAATCCTCGAACGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCG‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2329356‑2329471‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccg‑cTGCTGGCGGCGATACCTTCCTGGAGAACCTTCGCCCCTTCGTTGACCAGTGCCAGCAGGCAACGTTCGAGGATTTCCTCGGCACTGATGCCCCGACGTCGGTAGCCAAGGTTCTGGGACACCTGCAGCACCAACGCGTCGACCTGCGG < NC_002947/2329476‑2329329 GTGGCCCAGAACCTTGGCTACCGACGTCCGAGACTCAGTTTTGAGGAAATCCTCGAACGTTGCCTGCTGGCACTGGTCAAGGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCG‑CTGCTGGCGGCGATACCTTCCTGGAGAACCTTCGC < 2:209736/150‑1 GTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCG‑CTGCTGGCGGCGA > 1:401587/1‑53 GTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCG‑CTGCTGGCGGCGA > 1:401691/1‑53 GTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCG‑CTGCTGGCGGCGA < 2:401587/53‑1 GTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCG‑CTGCTGGCGGCGA < 2:401691/53‑1 TCCAGGAAGGTATCGCCGCCAGC‑AGCGGCGACACCTTCCTGGAGAACCTTCGCCCCTTCGTTGACCAGTGCCAGCAGGCAACGTTCGAGGATTTCCTCGGCACTGATGCCCCGACGTCGGTAGCCAAGGTTCTGG < 2:284822/135‑1 TCCAGGAAGGTATCGCCG‑CCAGCAGCGGCGACACCTTCCTGGAGAACCTTCGCCCCTTCGTTGACCAGTGCCAGCAGGCAACGTTCGAGGATTTCCTCGGCACTGATGCCCCGACGTCGGTAGCCAAGGTTCTGG > 1:284822/1‑135 TCGCCG‑CTGCTGGCGGCGATACCTTCCTGGAGAACCTTCGCCCCTTCGTTGACCAGTGCCAGCAGGCAACGTTCGAGGATTTCCTCGGCACTGATGCCCCGACGTCGGTAGCCAAGGTTCTGGGACACCTGCAGCACCAACGCGTCGACC > 1:360419/1‑150 GCCG‑CTGCTGGCGGCGATACCTTCCTGGAGAACCTTCGCCCCTTCGTTGACCAGTGCCAGCAGGCAACGTTCGAGGATTTCCTCGGCACTGATGCCCCGACGTCGGTAGCCAAGGTTCTGGGACACCTGCAGCACCAACGCGTCGACCTG > 1:617527/1‑150 GCCG‑CTGCTGGCGGCGATACCTTCCTGGAGAACCTTCGCCCCTTCGTTGACCAGTGCCAGCAGGCAACGTTCGAGGATTTCCTCGGCACTGATGCCCCGACGTCGGTAGCCAAGGTTCTGGGACACCTGCAGCACCAACGCGTCGACCTG > 2:514391/1‑150 G‑CTGCTGGCGGCGATACCTTCCTGGAGAACCTTCGCCCCTTCGTTGACCAGTGCCAGCAGGCAACGTTCGAGGATTTCCTCGGCACTGATGCCCCGACGTCGGTAGCCAAGGTTCTGGGACACCTGCAGCACCAACGCGTCGACCTGCGG < 2:617527/150‑1 GTGTCCCAGAACCTTGGCTACCGACGTCGGGGCATCAGTGCCGAGGAAATCCTCGAACGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCG‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2329356‑2329471‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccg‑cTGCTGGCGGCGATACCTTCCTGGAGAACCTTCGCCCCTTCGTTGACCAGTGCCAGCAGGCAACGTTCGAGGATTTCCTCGGCACTGATGCCCCGACGTCGGTAGCCAAGGTTCTGGGACACCTGCAGCACCAACGCGTCGACCTGCGG < NC_002947/2329476‑2329329 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |