| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2329471 | 24 (0.970) | 7 (0.300) | 5/250 | 2.4 | 23.8% | coding (1016/1239 nt) | PP_2047 | 3‑hydroxyacyl‑CoA dehydrogenase family protein |
| ? | NC_002947 | = 2329476 | 22 (0.930) | coding (1021/1239 nt) | PP_2047 | 3‑hydroxyacyl‑CoA dehydrogenase family protein | |||||
CCGCAGGTCGACGCGTTGGTGCTGCAGGTGTCCCAGAACCTTGGCTACCGACGTCGGGGCATCAGTGCCGAGGAAATCCTCGAACGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCTGCCACTGGCGGGCCCATGCGCTGGGCTGACGAACAAGGGGCGCCGTTTATCCTGGCCCGGCTGGAATAC > NC_002947/2329329‑2329592 | ccGCAGGTCGACGCGTTGGTGCTGCAGGTGTCCCAGAACCTTGGCTACCGACGTCGGGGCATCAGTGCCGAGGAAATCCTCGAACGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAgc < 2:617527‑M2/150‑3 (MQ=255) cAGGTCGACGCGTTGGTGCTGCAGGTGTCCCAGAACCTTGGCTACCGACGTCGGGGCATCAGTGCCGAGGAAATCCTCGAACGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAgcggc > 1:617527‑M2/1‑145 (MQ=255) cAGGTCGACGCGTTGGTGCTGCAGGTGTCCCAGAACCTTGGCTACCGACGTCGGGGCATCAGTGCCGAGGAAATCCTCGAACGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAgcggc > 2:514391‑M2/1‑145 (MQ=255) ggTCGACGCGTTGGTGCTGCAGGTGTCCCAGAACCTTGGCTACCGACGTCGGGGCATCAGTGCCGAGGAAATCCTCGAACGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAgcggcga > 1:360419‑M2/1‑143 (MQ=255) gTTGGTGCTGCAGGTGTCCCAGAACCTTGGCTACCGACGTCGGGGCATCAGTGCCGAGGAAATCCTCGAACGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCa > 1:572747/1‑150 (MQ=255) tgctgcAGGTGTCCCAGAACCTTGGCTACCGACGTCGGGGCATCAGTGCCGAGGAAATCCTCGAACGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCt < 2:41779/150‑1 (MQ=255) ccAGAACCTTGGCTACCGACGTCGGGGCATCAGTGCCGAGGAAATCCTCGAACGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTGTCGCCGCTGCTGgcggcgataccttcctgga > 1:284822‑M2/1‑116 (MQ=255) ccAGAACCTTGGCTACCGACGTCGGGGCATCAGTGCCGAGGAAATCCTCGAACGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTGTCGCCGCT‑GCTggcggcgataccttcctgga < 2:284822‑M2/135‑21 (MQ=255) gAACCTTGGCTACCGACGTCGGGGCATCAGTGCCGAGGAAATCCTCGAACGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATgg < 1:543599/150‑1 (MQ=255) tACCGACGTCGGGGCATCAGTGCCGAGGAAATCCTCGAACGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCt < 1:370994/150‑1 (MQ=255) aaTCCTCGAACGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCTGCCACTGGCGGGCCCATGCGCTGGGCTGa < 1:393804/150‑1 (MQ=255) aCGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGt < 2:215627/84‑1 (MQ=255) aCGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGt > 1:215627/1‑84 (MQ=255) gTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCt > 1:472970/1‑110 (MQ=255) gTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCt < 2:472970/110‑1 (MQ=255) ccTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCTACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCTGCCACTGGCGGGCCCATGCGCTGGGCTGACGAACAAgg < 1:403217/144‑1 (MQ=255) ccTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCTACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCTGCCACTGGCGGGCCCATGCGCTGGGCTGACGAACAAgg > 2:403217/1‑144 (MQ=255) tgctgGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCTGCCACTGGCGGGCCCATGCGCTGGGCTGACGAACAAGGGGCGCCGt > 2:266483/1‑150 (MQ=255) tCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCTGCCACTGGCGGGCCCATGCGCTGGGCTGACGAACAAGGGGCGCCGTTTATCCTGGccc > 2:268219/1‑150 (MQ=255) aaCGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCTGCCACTGGCGGGc < 1:429355/103‑1 (MQ=255) aaCGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCTGCCACTGGCGGGc > 2:429355/1‑103 (MQ=255) aCGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCTGCCACTGGCGGGCCCATGCGCTGGGCTGACGAACAAGGGGCGCCGTTTATCCTGGCCCGGc > 2:501408/1‑150 (MQ=255) gAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCTGCCACTGGCGGGCCCATGCGCTGGGCTGACGAACAAGGGGCGCCGTTTATCCTGGCCCGGCTg < 1:501408/150‑1 (MQ=255) gggCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGTCTTCCCGGCTGCCACTGGCGGGCCCATGCGCTGGGCTGACGAACAAGGGGCGCCGTTTATCCTGGCCCGGCTGGAAt < 1:266483/150‑1 (MQ=255) gCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAgcggcgataccttcctggagaaccttcgccccttccttgaccagtgccagcaggcaacgttcgaggatttcctcaaaactgagtctcggacgtcggtagccaaggttctgggccac < 2:209736‑M2/150‑117 (MQ=255) gCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCTGc > 2:510353/1‑83 (MQ=255) gCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCTGc < 1:510353/83‑1 (MQ=255) cAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCTGCCACTGGCGGGCCCATGCGCTGGGCTGACGAACAAGGGGCGCCGTTTATCCTGGCCCGGCTg < 2:500658/132‑1 (MQ=255) cAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCTGCCACTGGCGGGCCCATGCGCTGGGCTGACGAACAAGGGGCGCCGTTTATCCTGGCCCGGCTg > 1:500658/1‑132 (MQ=255) tCGCCGCCAGCAgcggcgataccttcctggagaaccttcgccccttcgttgac < 2:401691‑M2/53‑42 (MQ=255) tCGCCGCCAGCAgcggcgataccttcctggagaaccttcgccccttcgttgac > 1:401691‑M2/1‑12 (MQ=255) tCGCCGCCAGCAgcggcgataccttcctggagaaccttcgccccttcgttgac < 2:401587‑M2/53‑42 (MQ=255) tCGCCGCCAGCAgcggcgataccttcctggagaaccttcgccccttcgttgac > 1:401587‑M2/1‑12 (MQ=255) | CCGCAGGTCGACGCGTTGGTGCTGCAGGTGTCCCAGAACCTTGGCTACCGACGTCGGGGCATCAGTGCCGAGGAAATCCTCGAACGTTGCCTGCTGGCACTGGTCAACGAAGGGGCGAAGGTTCTCCAGGAAGGTATCGCCGCCAGCAGCGGCGACATCGACCAGGTCTGGCTCCACGGCTATGGCTTCCCGGCTGCCACTGGCGGGCCCATGCGCTGGGCTGACGAACAAGGGGCGCCGTTTATCCTGGCCCGGCTGGAATAC > NC_002947/2329329‑2329592 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |