| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4726014 = | 27 (1.090) | 6 (0.250) | 6/250 | 2.1 | 21.6% | intergenic (‑136/+100) | PP_4183/brnQ | membrane protein/branched‑chain amino acid transporter |
| ? | NC_002947 | 4726042 = | 18 (0.760) | intergenic (‑164/+72) | PP_4183/brnQ | membrane protein/branched‑chain amino acid transporter | |||||
GGTGCCGTGGCCTGCGACCGCATGCTCGGCAAGCCGCGCGAGGCGCTGGCCTGACCGGACAAGTGGAAGCCTGAGGGCGGCACCGGCCACAAGCCGAAGGGTGCCCGCCAAGGGTGAAAACAAGAGAGCCCCGTCTCCGAAAGGATGCGGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4726167‑4726014‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggggctCTCTTGTTTTCACCCTTGGCGGGCACCCTTCGGCTTGTGGCCGGTGCCGCCCTCAGGCTTCCACTTGTCCGGTCAGGCCAGCGCCTCGCGCGGCTTGCCGAGCATGCGGTCGCAGGCCACGGCACCCACCAGGGTCACCACCGA > NC_002947/4726042‑4726185 GGTGCCGTGGCCTGCGACCGCATGCTCGGCAAGCCGCGCGAGGCGCTGGCCTGACCGGACAAGTGGAAGCCTGAGGGCGGCACCGGCCACAAGCCGAAGGGTGCCCGCCAAGGGTGAAAACAAGAGAGCCCCGTCTCCGAAAGGATGCGG > 1:116959/1‑150 CTGACCGGACAAGTGGAAGCCTGAGGGCGGCACCGGCCACAAGCCGAAGGGTGCCCGCCAAGGGTGAAAACAAGAAAGCCCCGCATCCTTTCGGAGACGGGGCTCTCTTGTTTTCACCCTTGGCGGGCACCCTTCGG < 1:190200/137‑1 CTGACCGGACAAGTGGAAGCCTGAGGGCGGCACCGGCCACAAGCCGAAGGGTGCCCGCCAAGGGTGAAAACAAGAAAGCCCCGCATCCTTTCGGAGACGGGGCTCTCTTGTTTTCACCCTTGGCGGGCACCCTTCGG > 2:190200/1‑137 GTGGAAGCCTGAGGGCGGCACCGGCCACAAGCCGAAGGGTGCCCGCCAAGGGTGAAAACAAGAGAGCCCCGTCTCCGAAAGGATGCGG > 1:51724/1‑88 GTGGAAGCCTGAGGGCGGCACCGGCCACAAGCCGAAGGGTGCCCGCCAAGGGTGAAAACAAGAGAGCCCCGTCTCCGAAAGGATGCGG < 2:51724/88‑1 CCAAGGGTGAAAACAAGAGAGCCCCGTCTCCGAAAGGATGCGGGGCTCTCTTGTTTTCACCCTTGGCGGGCACCCTTCGGCTT > 1:406425/1‑83 CCAAGGGTGAAAACAAGAGAGCCCCGTCTCCGAAAGGATGCGGGGCTCTCTTGTTTTCACCCTTGGCGGGCACCCTTCGGCTT < 2:406425/83‑1 GAGAGCCCCGTCTCCGAAAGGATGCGGGGCTCTCTTGTTTTCACCCTTGGCGGGCACCCTTCGGCTTGTGGCCGGTGCCGCCCTCAGGCTTCCACTTGTCCGGTCAGGC < 1:346944/109‑1 GAGAGCCCCGTCTCCGAAAGGATGCGGGGCTCTCTTGTTTTCACCCTTGGCGGGCACCCTTCGGCTTGTGGCCGGTGCCGCCCTCAGGCTTCCACTTGTCCGGTCAGGC > 2:346944/1‑109 GGGGCTCTCTTGTTTTCACCCTTGGCGGGCACCCTTCGGCTTGTGGCCGGTGCCGCCCTCAGGCTTCCACTTGTCCGGTCAGGCCAGCGCCTCGCGCGGCTTGCCGAGCATGCGGTCGCAGGCCACGGCACCCACCAGGGTCACCACCGA > 1:273741/1‑150 GGTGCCGTGGCCTGCGACCGCATGCTCGGCAAGCCGCGCGAGGCGCTGGCCTGACCGGACAAGTGGAAGCCTGAGGGCGGCACCGGCCACAAGCCGAAGGGTGCCCGCCAAGGGTGAAAACAAGAGAGCCCCGTCTCCGAAAGGATGCGGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4726167‑4726014‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggggctCTCTTGTTTTCACCCTTGGCGGGCACCCTTCGGCTTGTGGCCGGTGCCGCCCTCAGGCTTCCACTTGTCCGGTCAGGCCAGCGCCTCGCGCGGCTTGCCGAGCATGCGGTCGCAGGCCACGGCACCCACCAGGGTCACCACCGA > NC_002947/4726042‑4726185 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |