| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1138537 = | 36 (1.450) | 7 (0.320) | 7/236 | 1.7 | 20.8% | intergenic (‑62/+103) | arcC/arcB | carbamate kinase/ornithine carbamoyltransferase |
| ? | NC_002947 | 1138626 = | 21 (0.950) | intergenic (‑151/+14) | arcC/arcB | carbamate kinase/ornithine carbamoyltransferase | |||||
GGATATTGGCGCGCTGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGC > NC_002947/1138391‑1138685 | ccggacctggccaacggcatcgaagtgaccgatgacgtgttcgagtcgccagcgtgcatcgccttcgagcaggcggaaaaccgcatgcacacgatcaaggcgatcctggtatcgaccctggctgatctataagtagcccgcagtccCtgt < 1:545071‑M1/4‑1 (MQ=255) gATATTGGCGCGCTGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCtgtg < 1:346653/150‑1 (MQ=255) cggacctggccaacggcatcgaagtgaccgatgacgtgttcgagtcgccagcgtgcatcgccttcgagcaggcggaaaaccgcatgcacacgatcaaggcgatcctggtatcgaccctggctgatctataagtagcccgcagtccCtgtg < 2:244131‑M1/5‑1 (MQ=255) ggacctggccaacggcatcgaagtgaccgatgacgtgttcgagtcgccagcgtgcatcgccttcgagcaggcggaaaaccgcatgcacacgatcaaggcgatcctggtatcgaccctggctgatctataagtagcccgcagtccCTGTgg > 2:351159‑M1/145‑150 (MQ=255) ggccaacggcatcgaagtgaccgatgacgtgttcgagtcgccagcgtgcatcgccttcgagcaggcggaaaaccgcatgcacacgatcaaggcgatcctggtatcgaccctggctgatctataagtagcccgcagtccCTGTGGGAGCgg > 1:244131‑M1/139‑150 (MQ=255) gcgcgcTGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCgg < 1:280786/150‑1 (MQ=255) gccaacggaatcgaagtgaccgatgacgtgttcgagtcgccagcgtgcatcgccttcgagcaggaggaaaaccgcatgcacacgatcaaggcgatcctggtatcgaccctggctgatctataagtagcccgcagtccCTGTGGGAGCggg < 1:304099‑M1/13‑1 (MQ=255) gcgcTGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGc > 1:400507/1‑150 (MQ=255) ccaacggcatcgaagtgaccgatgacgtgttcgagtcgccagcgtgcatcgccttcgagcaggcggaaaaccgcatgcacacgatcaaggcgatcctggtatcgaccctggctgatctataagtagcccgcagtccCTGTGGGAGCGGGc > 2:9583‑M1/137‑150 (MQ=255) cgcTGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCa < 1:155855/150‑1 (MQ=255) tGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCACGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGc > 1:166824/1‑150 (MQ=255) ttGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCcg > 2:389608/1‑150 (MQ=255) tCAGGGGTCATAGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCCGCACGGAAGCTGCGGAGTTCGCTGTGTGAGCGGGCATGCCCGCGa > 2:353100/1‑150 (MQ=255) gCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAAAGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAaga < 1:14722/150‑1 (MQ=255) cGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAagag < 2:445728/150‑1 (MQ=255) tCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGcc > 1:369433/1‑150 (MQ=255) cATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCa < 2:369433/150‑1 (MQ=255) cTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTg > 2:317057/1‑150 (MQ=255) gccgcGACGAAGCATGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAATCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGACGAGGCCAGACCTGAca > 2:101028/1‑150 (MQ=255) ccgcGACGAAGCACGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGAcat < 2:166824/150‑1 (MQ=255) gacgaAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACatcatc > 2:304099/1‑150 (MQ=255) agtcgccagcgtgcatcgccttcgagcaggcggaaaaccgcatgcacacgatcaaggcgatcctggtatcgaccctggctgatctataagtagcccgcagtccCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAGACCTGACATCATCg > 1:135152‑M1/104‑150 (MQ=255) ccttcgagcaggcggaaaaccgcatgcacacgatcaaggcgatcctggtatcgaccctggctgatctataagtagcccgcagtccCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCt < 1:101974‑M1/65‑1 (MQ=255) aacaacGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCa > 1:378389/1‑150 (MQ=255) aaccgcatgcacacgatcaaggcgatcctggtatcgaccctggctgatctataagtagcccgcagtccCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCt > 2:101974‑M1/69‑150 (MQ=255) aTGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCGTGCCCGcgaa > 1:470390/1‑144 (MQ=255) aTGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCGTGCCCGcgaa < 2:470390/147‑4 (MQ=255) tgGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAACAGATTATTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAgg < 1:353100/150‑1 (MQ=255) tCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCg > 2:251970/1‑150 (MQ=255) cTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCgatga > 1:551774/1‑102 (MQ=255) cTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCgatga < 2:551774/102‑1 (MQ=255) aggcgatcctggtatcgaccctggctgatctataagtagcccgcagtccCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCAc > 1:163978‑M1/50‑124 (MQ=255) aggcgatcctggtatcgaccctggctgatctataagtagcccgcagtccCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCAc < 2:163978‑M1/75‑1 (MQ=255) gCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCGGGGGAGTTCGCTGTGGGAGCGGGCATGCCCGGGAAGAGGCCAGACCTGCCATTTTCGATGATGCGGCTGACGCTTTCGCGGGCACGCCCGCTCCCACAGGGACGGCGGGCTACt > 1:358903/1‑150 (MQ=255) gaatgGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAg > 1:599576/1‑150 (MQ=255) gTCGCTGCACGGAAGCTGCGCAGTTAGCTGTGGGAGCGGGCATGTCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGCCGCCTTCGCGGCCACGCCCGCTCCCACACGGACTGCGCGCCACACATAGATCAGCCAGCGTCg > 2:352912/1‑150 (MQ=255) tgatctataagtagcccgcagtccCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCgg < 1:511923‑M1/71‑1 (MQ=255) tgatctataagtagcccgcagtccCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCgg > 2:511923‑M1/25‑95 (MQ=255) tGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGGTAcc < 2:599576/150‑1 (MQ=255) gCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGt < 1:18008/142‑1 (MQ=255) gCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGt > 2:18008/1‑142 (MQ=255) gCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCa < 2:378389/150‑1 (MQ=255) cGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGa > 1:159406/1‑150 (MQ=255) aGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACAGCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGc < 2:229487/150‑1 (MQ=255) tGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTcc > 1:212647/1‑95 (MQ=255) tGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTcc < 2:212647/95‑1 (MQ=255) gAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATc < 1:389608/150‑1 (MQ=255) gTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCgt < 2:159406/150‑1 (MQ=255) gCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGc > 1:13974/1‑150 (MQ=255) | GGATATTGGCGCGCTGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGC > NC_002947/1138391‑1138685 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |