| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1138537 = | 36 (1.450) | 7 (0.320) | 7/236 | 1.7 | 20.8% | intergenic (‑62/+103) | arcC/arcB | carbamate kinase/ornithine carbamoyltransferase |
| ? | NC_002947 | 1138626 = | 21 (0.950) | intergenic (‑151/+14) | arcC/arcB | carbamate kinase/ornithine carbamoyltransferase | |||||
TGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTGGCCAGGTCCGG > NC_002947/1138477‑1138771 | tgGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAACAGATTATTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAgg < 1:353100/150‑1 (MQ=255) tCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCg > 2:251970/1‑150 (MQ=255) gCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCGGGGGAGTTCGCTGTGGGAGCGGGCATGCCCGGGAAGAGGCCAGACCTGCCATTTTCGATGATGCGGCTGACGCTTTCGCGGGCACGCCCGCTCCCACAGGGACGGCGGGCTACt > 1:358903/1‑150 (MQ=255) gaatgGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAg > 1:599576/1‑150 (MQ=255) gTCGCTGCACGGAAGCTGCGCAGTTAGCTGTGGGAGCGGGCATGTCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGCCGCCTTCGCGGCCACGCCCGCTCCCACACGGACTGCGCGCCACACATAGATCAGCCAGCGTCg > 2:352912/1‑150 (MQ=255) tGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGGTAcc < 2:599576/150‑1 (MQ=255) gCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGt < 1:18008/142‑1 (MQ=255) gCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGt > 2:18008/1‑142 (MQ=255) gCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCa < 2:378389/150‑1 (MQ=255) cGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGa > 1:159406/1‑150 (MQ=255) aGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACAGCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGc < 2:229487/150‑1 (MQ=255) gAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATc < 1:389608/150‑1 (MQ=255) gTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCgt < 2:159406/150‑1 (MQ=255) gCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGc > 1:13974/1‑150 (MQ=255) GGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCTTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCg > 2:358903‑M1/1‑150 (MQ=255) agcgggcgtgcccgcgaaggcgtcagccgcatcatcgatgatgtcaggtctggcctcttcgcgggcatgcccgctcccacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGtt > 2:101974‑M2/83‑150 (MQ=255) AGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCCCCGGGACTTCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGtt < 2:19570‑M1/150‑1 (MQ=255) CGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGtttt > 2:13974‑M1/1‑150 (MQ=255) CATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGc > 1:251970‑M1/1‑150 (MQ=255) gtgcccgcgaaggcgtcagccgcatcatcgatgatgtcaggtctggcctcttcgcgggcatgcccgctcccacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCt > 1:163978‑M2/76‑124 (MQ=255) gtgcccgcgaaggcgtcagccgcatcatcgatgatgtcaggtctggcctcttcgcgggcatgcccgctcccacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCt < 2:163978‑M2/49‑1 (MQ=255) ccgcgaaggcgtcagccgcatcatcgatgatgtcaggtctggcctcttcgcgggcatgcccgctcccacagGGACTGCGGGCTACTTATAGATCa < 1:511923‑M2/24‑1 (MQ=255) ccgcgaaggcgtcagccgcatcatcgatgatgtcaggtctggcctcttcgcgggcatgcccgctcccacagGGACTGCGGGCTACTTATAGATCa > 2:511923‑M2/72‑95 (MQ=255) cgcgAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTc < 2:400507/150‑1 (MQ=255) aggcgtcagccgcatcatcgatgatgtcaggtctggcctcttcgcgggcatgcccgctcccacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAgg < 1:101974‑M2/85‑1 (MQ=255) caggcccTGATACCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATg > 2:545071/6‑150 (MQ=255) gACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCAc > 2:620892/1‑150 (MQ=255) tGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCt > 1:491396/1‑102 (MQ=255) tGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCt < 2:491396/102‑1 (MQ=255) cgatgatgtcaggtctggcctcttcgcgggcacgcccgctcccacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACt > 1:135152‑M2/48‑150 (MQ=255) cTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTAATCCTGGTGCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCg < 1:352912/150‑1 (MQ=255) cgcgGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGa < 1:101028/150‑1 (MQ=255) gcccgctcccacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTgg > 2:9583‑M2/15‑150 (MQ=255) cccgctcccacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCTCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATTCCGTTGGc < 1:304099‑M2/137‑1 (MQ=255) ccgctcccacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTGGcc > 1:244131‑M2/13‑150 (MQ=255) ccacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTGGCCAGGTcc > 2:351159‑M2/7‑150 (MQ=255) cacagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTGGCCAGGTCCg < 2:244131‑M2/145‑1 (MQ=255) acagGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTGGCCAGGTCCgg < 1:545071‑M2/146‑1 (MQ=255) | TGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTGGCCAGGTCCGG > NC_002947/1138477‑1138771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |