| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1421592 | 15 (0.600) | 4 (0.170) | 4/252 | 2.7 | 21.4% | coding (166/1860 nt) | PP_1246 | hypothetical protein |
| ? | NC_002947 | = 1421617 | 15 (0.630) | coding (191/1860 nt) | PP_1246 | hypothetical protein | |||||
GCTGTGATCGGCGCTTGTGGTCTGGTACCGCAGGCGTTCGCCCACGAGCTGGCCTTTTCCAAGAAAGACAACATCAAGGTCGAAGTGCCCGGGGATGCCACCAGCTGGTGCAAGCCCCAGGTCGACCTGACCATCACCCGCCCGGCCTGGGATAACCAGGAACTGCTGGCGGGCCTGCTGACCAAGCTGCCGTTCGTGTTCGCCAAGGACTGCTCGACCGCCAAGGTGAGCTGGAAGGCGGTCGATGCCAAGGGCAACCTGTACGCCAGCGGCTCGGGCAATGCCAGCA > NC_002947/1421451‑1421739 | gctgTGATCGGCGCTTGTGGTCTGGTACCGCAGGCGTTCGCCCACGAGCTGGCCTTTTCCAAGAAAGACAACATCAAGGTCGAAGTGCCCGGGGATGCCACCAGCTGGTGCAAGCCCCAGGTCGACCTGACCATCACCCGCCCGGCCTgg > 1:91103/1‑150 (MQ=255) tgtgGTCTGGTACCGCAGGCGTTCGCCCACGAGCTGGCCTTTTCCAAGAAAGACAACATCAAGGTCGAAGTGCCCGGGGATGCCACCAGCTGGTGCAAGCCCCAGGTCGACCTGACCATCACCCGCCCGGCCTGGGATAACCAGGAActg < 2:118812/150‑1 (MQ=255) tCTGGTACCGCAGGCGTTCGCCCACGAGCTGGCCTTTTCCAAGAAAGACAACATCAAGGTCGAAGTGCCCGGGGATGCCACCAGCTGGTGCAAGCCCCAGGTCGACCTGACCATCACCCGCCCGGCCTGGGATAACCAGGAACTGCTggc < 1:19258‑M2/150‑4 (MQ=255) aGGCGTTCGCCCACGAGCTGGCCTTTTCCAAGAAAGACAACATCAAGGTCGAAGTGCCCGGGGATGCCACCAGCTGGTGCAAGCCCCAGGTCGACCTGACCATCACCCGCCCGGCCTGGGATAACCAGGAACTGCTGGCGGGCCTGCTGa < 2:91103/150‑1 (MQ=255) cttCGCCCACGAGCTGGCCTTTTCCAAGAAAGACAACATAAAGCTACAAGTGCCCGGGGATGCCACCAGCTGGTGCAAGCCCCAGGTCGACCTGACCATCACCCGCCCGGCCTGGGATAACCAGGAACTGCTGGCGGGCCTGCTGACCaa < 1:539868/149‑1 (MQ=255) aagaaagaCAACATCAAGGTCGAAGTGCCCGGGGATGCCACCAGCTGGTGCAAGCCCCAGGTCGACCTGACCATCACCCGCCagcagttactggttatcccaggccgg > 1:561136‑M1/1‑82 (MQ=255) aagaaagaCAACATCAAGGTCGAAGTGCCCGGGGATGCCACCAGCTGGTGCAAGCCCCAGGTCGACCTGACCATAACCCGCCagcagttactggttatcccaggccgg < 2:561136‑M1/108‑27 (MQ=255) gaCAACATCAAGGTCGAAGTGCCCGGGGATGCCACCAGCTGGTGCAAGCCCCAGGTCGACCTGACCATCACCCGCCCGGCCTGGGATAACCAGGAACTGCTGGCGGGCCTGCTGACCAAGCTGCCGTTCGTGTTCGCCAAGGACTGCTCg > 1:557790/1‑150 (MQ=255) tCAAGGTAGAAGTACCCGGGGATGCCACCAGCTGGTGCAAGCCCCAGGTCGACCTGACCATCACCCGCCagcagttcctggttatcccaggccgggcgggtg > 1:479377‑M1/1‑69 (MQ=255) tCAAGGTAGAAGTACCCGGGGATGCCACCAGCTGGTGCAAGCCCCAGGTCGACCTGACCATCACCCGCCagcagttcctggttatcccaggccgggcgggtg < 2:479377‑M1/102‑34 (MQ=255) gAAGTGCCCGGGGATGCCACCAGCTGGTGCAAGCCCCAGGTCGACCTGACCATCACCCGCCCGGCCTGGGATAACCAGGAACTGCTGGCGGGCCTGCTGACCAAGCTGCCGTTCGTGTTCGCCAAGGACTGCTCGACCGCCAAGGt > 1:294190/1‑146 (MQ=255) gAAGTGCCCGGGGATGCCACCAGCTGGTGCAAGCCCCAGGTCGACCTGACCATCACCCGCCCGGCCTGGGATAACCAGGAACTGCTGGCGGGCCTGCTGACCAAGCTGCCGTTCGTGTTCGCCAAGGACTGCTCGACCGCCAAGGt < 2:294190/146‑1 (MQ=255) aTGCCACCAGCTGGTGCAAGCCCCAGGTCGACCTGACCATCACCCGCCCGGCCTGGGATAACCAGGAACTGCTGGCGGGCCTGCTGACCAAGCTGCCGTTCGTGTTCGCCAAGGACTGCTCGACCGCCAAGGTGAGCTGGAAGGCGGTCg > 1:303498/1‑150 (MQ=255) ccaccaGCTGGTGCAAGCCCCAGGTCGACCTGACCATCACCCGCCCGGCCTGGGATAACCAGGAACTGCTGGCGGGCCTGCTGACCAAGCTGCCGTTCGTGTTCGCCAAGGACTGCTCGACCGCCAAGGTGAGCTGGAAGGCGGTCGATg > 2:332197/1‑150 (MQ=255) ccAGGTCGACCTGACCATCACCCGCCCGGCCTGGGATAACCAGGAACTGCTGGCGGGCCTGCTGACCAAGCTGCCGTTCGTGTTCGCCAAGGACTGCTCGACCGCCAAGGTGAGCTGGAAGGCGGTCGATGCCAAGGGCAACCTGTAc > 1:299580/1‑148 (MQ=255) ccAGGTCGACCTGACCATCACCCGCCCGGCCTGGGATAACCAGGAACTGCTGGCGGGCCTGCTGACCAAGCTGCCGTTCGTGTTCGCCAAGGACTGCTCGACCGCCAAGGTGAGCTGGAAGGCGGTCGATGCCAAGGGCAACCTGTAc < 2:299580/148‑1 (MQ=255) ccTGACCATCACCCGCCCGGCCTGGGATAACCAGGAACTGCTGGCGGGCCTGCTGACCAAGCTGCCGTTCGTGTTCGCCAAGGACTGCTCGACCGCCAAGGTGAGCTGGAAGGCg < 1:243836/115‑1 (MQ=255) ccTGACCATCACCCGCCCGGCCTGGGATAACCAGGAACTGCTGGCGGGCCTGCTGACCAAGCTGCCGTTCGTGTTCGCCAAGGACTGCTCGACCGCCAAGGTGAGCTGGAAGGCg > 2:243836/1‑115 (MQ=255) cATCACCCGCCCGGCCTGGGATAACCAGGAACTGCTGGCGGGCCTGCTGACCAAGCTGCCGTTCGTGTTCGCCAAGGACTGCTCGACCGCCAAGGTGAGCTGGAAGGCGGTCGATGCCAAGGGCAACCTGTACGCCAGCGGCTCGGGCaa > 2:567833/1‑150 (MQ=255) aTCACCCGCCCGGCCTGGGATAACCAGGAACTGCTGGCGGGCCTGCTGACCAAGCTGCCGTTCGTGTTCGCCAAGGACTGCTCGACCGCCAAGGTGAGCTGGAAGGCGGTCGATGCCAAGGGCAACCTGTACGCCAGCGGCTCGGGCAAt > 1:527036/1‑150 (MQ=255) cACCCGCCCGGCCTGGGATAACCAGGAACTGCTggcgggtgatggtcaggtcgacctggggcttgcaccagctggtggcatccccgggtacttctaccttga < 2:479377‑M2/102‑70 (MQ=255) cACCCGCCCGGCCTGGGATAACCAGGAACTGCTggcgggtgatggtcaggtcgacctggggcttgcaccagctggtggcatccccgggtacttctaccttga > 1:479377‑M2/1‑33 (MQ=255) gCCagcagttcctggttatcccaggccgggcgggtgatggtcaggtcgacctggggcttgcaccagctggtggcatccccgggcacttcgaccttgatgttgtctttcttggaaaaggccagctcgtgggcgaacgcctgcggtaccaga < 1:19258‑M1/150‑148 (MQ=255) ccgGCCTGGGATAACCAGTAACTGCTggcgggttatggtcaggtcgacctggggcttgcaccagctggtggcatccccgggcacttcgaccttgatgttgtctttctt < 2:561136‑M2/108‑83 (MQ=255) ccgGCCTGGGATAACCAGTAACTGCTggcgggtgatggtcaggtcgacctggggcttgcaccagctggtggcatccccgggcacttcgaccttgatgttgtctttctt > 1:561136‑M2/1‑26 (MQ=255) | GCTGTGATCGGCGCTTGTGGTCTGGTACCGCAGGCGTTCGCCCACGAGCTGGCCTTTTCCAAGAAAGACAACATCAAGGTCGAAGTGCCCGGGGATGCCACCAGCTGGTGCAAGCCCCAGGTCGACCTGACCATCACCCGCCCGGCCTGGGATAACCAGGAACTGCTGGCGGGCCTGCTGACCAAGCTGCCGTTCGTGTTCGCCAAGGACTGCTCGACCGCCAAGGTGAGCTGGAAGGCGGTCGATGCCAAGGGCAACCTGTACGCCAGCGGCTCGGGCAATGCCAGCA > NC_002947/1421451‑1421739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |