New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5415552 =	16 (0.640)	4 (0.170)	4/256	2.8	21.9%	coding (273/1392 nt)	gabP‑V	gamma‑aminobutyrate permease
	?	NC_002947	5415582 =	13 (0.540)					coding (243/1392 nt)	gabP‑V	gamma‑aminobutyrate permease

TACCGGCCAGCAGCAACACCGAAGCCAGGGCGAAGATCCAGCTGTCCACCTGCGGGAACCAGGCGTTCAGCACATGCCCGGCGGCCAATGCTTCGATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAAT  >  NC_002947/5415407‑5415680                                                                                                                                                  |                                                                                                                                 tACCGGCCAGCAGCAACACCGAAGCCAGGGCGAAGATCCAGCTGTCCACCTGCGGGAACCAGGCGTTCAGCACATGCCCGGCGGCCAATGCTTCGATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCgg                                                                                                                              <  1:60535/150‑1 (MQ=255)        cagcagCAACACCGAAGCCAGGGCGAAGATCCAGCTGTACACCTGCGGGAACCAGGCGTTCAGCACATGCCCGGCGGCCAATGCTTCGATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGca                                                                                                                       <  2:533268/150‑2 (MQ=255)          gcagcaACACCGAAGCCAGGGCGAAGATCCAGCTGTCCACCTGCGGGAACCAGGCGTTCAGCACATGCCCGGCGGCCAATGCTTCGATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGc                                                                                                                     <  1:87164/150‑1 (MQ=255)                                      ccAGCTGTCCACCTGCGGGAACCAGGCGTTCAGCACATGCCCGGCGGCCAATGCTTCGATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGaaaa                                                                                         <  2:280622/150‑1 (MQ=255)                                      ccAGCTGTCCACCTGCGGGAACCAGGCGTTCAGCACATGCCCGGCGGCCAATGCTTCGATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGaaaa                                                                                         >  2:159286/1‑150 (MQ=255)                                            ataatttcctatttcgtggccggtaccctggtggtactggtcatgcgcatgctcggcgaaatggccgtggcgcaccccgacaccggatcgttttccacctatGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGt                                                                                               >  2:57200‑M1/103‑138 (MQ=255)                                            ataatttcctatttcgtggccggtaccctggtggtactggtcatgcgcatgctcggcgaaatggccgtggcgcaccccgacaccggatcgttttccacctatGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGt                                                                                               <  1:57200‑M1/36‑1 (MQ=255)                                                        gAACCAGGCGTTCAGCACATGCCCGGCGGCCAATGCTTCGATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTg                                                                       >  1:441704/1‑150 (MQ=255)                                                             aGGCGTTCAGCACATGCCCGGCGGCCAATGCTTCGATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCgg                                                                                                      <  1:240848/114‑1 (MQ=255)                                                             aGGCGTTCAGCACATGCCCGGCGGCCAATGCTTCGATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCgg                                                                                                      >  2:240848/1‑114 (MQ=255)                                                                    cAGCACATGCCCGGCGGCGAATGTTTCGATGGTAATGAGCGGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGCGCTAGTCGGCAGAGCTTGAAAACGAGCCGGTGTCGTGGTGCGCCACGGCCAt                                                           >  2:353120/1‑150 (MQ=37)                                                                          aTGCCCGGCGTCCAATGCTTCGATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGcc                                                     <  1:35248/150‑1 (MQ=255)                                                                                            ttCGATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAg                                   >  1:445321/1‑150 (MQ=255)                                                                                                  ggcgaaatggccgtggcgcaccccgacaccggatcgttttccacctatGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATc                                                                                    >  1:378550‑M1/49‑95 (MQ=255)                                                                                                  ggcgaaatggccgtggcgcaccccgacaccggatcgttttccacctatGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATc                                                                                    <  2:378550‑M1/47‑1 (MQ=255)                                                                                                    gAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTAccacca                           >  1:518330/1‑150 (MQ=255)                                                                                                            aGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCg                   <  1:159286/150‑1 (MQ=255)                                                                                                                        caccaGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAg       >  2:266780/1‑150 (MQ=255)                                                                                                                            aGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGaaa   <  2:441704/150‑1 (MQ=255)                                                                                                                             gTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAAt  >  1:421903/1‑150 (MQ=255)                                                                                                                                                  GCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTAc                     >  1:606443‑M1/1‑110 (MQ=255)                                                                                                                                                  GCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTAc                     <  2:606443‑M1/110‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                 TACCGGCCAGCAGCAACACCGAAGCCAGGGCGAAGATCCAGCTGTCCACCTGCGGGAACCAGGCGTTCAGCACATGCCCGGCGGCCAATGCTTCGATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAAT  >  NC_002947/5415407‑5415680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.