| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2271258 = | 24 (0.970) | 8 (0.370) | 7/232 | 1.7 | 29.0% | intergenic (+36/‑184) | PP_2002/PP_t31 | oxidoreductase/tRNA‑Val |
| ? | NC_002947 | 2271306 = | 18 (0.820) | intergenic (+84/‑136) | PP_2002/PP_t31 | oxidoreductase/tRNA‑Val | |||||
CACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCAACA > NC_002947/2271165‑2271435 | cACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAag > 2:457666/1‑150 (MQ=255) tttacgcaggtggcgaagctaagtcaatagccccattgaatttttttcaaaaaggcaacgtgatgtgattgcctgtgccggcctcttcgcgggtaaacccgctcctacaacggttaatgtccgactgtaggagcgggtttaCCCGCGaa < 1:181914‑M2/8‑1 (MQ=255) tttacgcaggtggcgaagctaagtcaatagccccattgaatttttttcaaaaaggcaacgtgatgtgattgcctgtgccggcctcttcgcgggtaaacccgctcctacaacggttaatgtccgactgtaggagcgggtttaCCCGCGaa > 2:181914‑M2/142‑149 (MQ=255) gTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGGTTACCCCCGAAGAGGCCGCCACAGGCAgtca > 2:99409/1‑150 (MQ=255) ccaTGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAatcaca < 1:185822/148‑1 (MQ=255) gATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAatcacat < 2:164354/150‑1 (MQ=255) ggcATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGtt > 1:487871/1‑150 (MQ=255) ccGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCttttt > 1:3415/1‑150 (MQ=255) ccGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGCTGCCttttt < 1:556884/150‑1 (MQ=255) tataCCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCaa < 1:213222/150‑1 (MQ=255) ccTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGa > 2:296232/1‑150 (MQ=255) ttGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAatcacatca > 2:455393/1‑111 (MQ=255) ttGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAatcacatca < 1:455393/111‑1 (MQ=255) cGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCttttt < 2:140578/108‑1 (MQ=255) cGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCttttt > 1:140578/1‑108 (MQ=255) ttcgcgggTAAACCCGCTCCTACAGT‑CGGACATTAACCGT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTaaa < 1:181914‑M1/141‑1 (MQ=255) ttcgcgggTAAACCCGCTCCTACA‑GTCGGACATTAACCGT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTaaa > 2:181914‑M1/9‑149 (MQ=255) ttCGCGGCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCGTCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAAt > 2:240647/1‑150 (MQ=255) gcgTCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTc < 1:499320/150‑1 (MQ=255) TAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGc > 1:296232‑M1/1‑150 (MQ=255) TAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGc < 2:407802‑M1/150‑1 (MQ=255) CCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGAc > 1:271479‑M1/1‑114 (MQ=255) CCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGAc < 2:271479‑M1/114‑1 (MQ=255) cccgctcctacagtcggacattaaccgttgtaggagcgggtttaCCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTAt < 1:294020‑M2/67‑1 (MQ=255) cccgctcctacagtcggacattaaccgttgtaggagcgggtttaCCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTAt > 2:294020‑M2/45‑111 (MQ=255) GCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCg < 2:300401‑M1/150‑1 (MQ=255) TCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGaa > 1:457666‑M1/1‑150 (MQ=255) TCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGaa > 2:487871‑M1/1‑150 (MQ=255) tacagtcggacattaaccgttgtaggagcgggtttaGCCGCGAAGAGGCCGGCGCAGGCAATCACATCACGTTGCCTTTTTGaaaa > 2:248123‑M2/37‑86 (MQ=255) tacagtcggacattaaccgttgtaggagcgggtttaGCCGCGAAGAGGCCGGCGCAGGCAATCACATCACGTTGCCTTTTTGaaaa < 1:248123‑M2/50‑1 (MQ=255) tacagtcggacattaaccgttgtaggagcgggtttaGCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTg < 1:548081‑M2/87‑1 (MQ=255) tacagtcggacattaaccgttgtaggagcgggtttaGCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTg > 2:548081‑M2/37‑123 (MQ=255) cGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTATTAAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGc < 2:443369/150‑1 (MQ=255) tCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCaa > 1:532746/1‑150 (MQ=255) cGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCAACa > 2:592383/1‑150 (MQ=255) | CACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑A‑CGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGCAAACGCAACAAGCAACA > NC_002947/2271165‑2271435 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |