| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1917264 = | 99 (1.330) | 8 (0.120) | 7/232 | NT | 8.3% | coding (1003/1083 nt) | PP_1718 | EAL domain‑containing diguanylate phosphodiesterase |
| ? | NC_002947 | 1917343 = | 87 (1.280) | coding (924/1083 nt) | PP_1718 | EAL domain‑containing diguanylate phosphodiesterase | |||||
ACCTGGAGGCATTGGAAGTGGTGGATGCCGATGGCAGGGGGTGCGGGTTGATTCACAGGGATGCGCTGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1917422‑1917264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaata‑‑G‑GCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCGGTTGTTCA > NC_002947/1917343‑1917490 ACCTGGAGGCATTGGAAGTGGTGGATGCCGATGGCAGGGGGTGCGGGTTGATTCACAGGGATGCGCTGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTAC < 1:908419/150‑1 CATTGGAAGTGGTGGATGCCGATGGCAGGGGGTGCGGGTTGATTCACAGGGATGCGCTGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATA < 2:1744438/150‑1 TGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCAATCGGC > 1:1378693/1‑150 CGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTCACCCGCGAATA‑‑G‑GCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTA > 2:1365728/1‑150 CCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTAT < 2:1378693/150‑1 tactGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATA‑‑G‑GCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAAT < 1:462696/123‑1 TACTGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATA‑‑G‑GCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAAT > 2:462696/1‑127 TACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATA‑‑G‑GCCGGCACAGGCAGCGCATCCCTGTGA > 1:275090/1‑85 TACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATA‑‑G‑GCCGGCACAGGCAGCGCATCCCTGTGA < 2:275090/85‑1 GCCCAATCACCAATCAGGCGTAGGAGCGGGTTCACCCGCGAATA‑‑G‑GCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGC < 1:1365728/150‑1 CCGCGAATA‑‑G‑GCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCGG > 1:1092913/1‑150 CCGCGAATA‑‑G‑GCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCA > 2:1062461/1‑103 CCGCGAATA‑‑G‑GCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCA < 1:1062461/103‑1 CGCGAATA‑‑G‑GCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCGGT > 1:904510/1‑150 GAATA‑‑G‑GCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCCGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCGGTTGT > 1:1373292/1‑150 TA‑‑G‑GCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCGGTTGTTCA < 1:326951/150‑1 TA‑‑G‑GCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCGGTTGTTCA < 1:245006/150‑1 ACCTGGAGGCATTGGAAGTGGTGGATGCCGATGGCAGGGGGTGCGGGTTGATTCACAGGGATGCGCTGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1917422‑1917264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaata‑‑G‑GCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCGGTTGTTCA > NC_002947/1917343‑1917490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |