| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3013109 = | 87 (1.170) | 5 (0.070) | 5/246 | NT | 5.6% | coding (302/708 nt) | PP_2634 | cellulose synthase |
| ? | NC_002947 | 3013135 = | 83 (1.150) | coding (328/708 nt) | PP_2634 | cellulose synthase | |||||
GCCCGAGCAGCAGGTGGCTGGCCATTTCGGCTTCTGCCACCAGTACCCGTACATCAGTCTCGATGCCATTGCCGGTGGTATCGCCCGGCAATTGCGGCAGGTCGTACAACAGCCAGTCGAAATGCTCGGCCAGCTCGACCTGG‑CGAGCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3013261‑3013109‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccGAGCATTTCGACTGGCTGTTGTACGACCTGCCGCAATTGCCGGGCGATACCACCGGCAATGGCATCGAGACTGATGTACGGGTACTGGTGGCAGAAGCCGAAATGGCCAGCCACCTGCTGCTCGGGC‑GACGTCCGCTCGAGCACTTCGA > NC_002947/3013135‑3013283 GCCCGAGCAGCAGGTGGCTGGCCGTTTCGGCTTCTGCCACCAGTACCCGTACATCAGTCTCGATGCCATTGCCGGTGGTATCGCCCGGCAATTGCGGCAGGTCGTACAACAGCCAGTCGAAATGCTCGGCCAGCTCGACCTGG‑CGAGCGG < 1:1251232/150‑1GCCCGAGCAGCAGGTGGCTGGCCATTTCGGCTTCGGCCACCAGTACCCGTACATCAGTCTCGATGCCATTGCCGGTGGTATCGCCCGGCAATTGCGGCAGGTCGTACAACAGCCAGTCCAAATGCTCGGCCAGCTCGACCTGG‑CGAGCGG < 1:300615/150‑1 CCGAGCAGCAGGTGGCTGGCCATTTCGTCTTATATCACCAGTACCCGTACATCAGTCTCGATGCCATTGCCGGTGGTATCGCCCGGCAATTGCGGCAGGCCGTACAACAGCCAGTCGAAATGCTCGGCCAGCTCGACCTGG‑CGAGCGGGC > 1:449442/1‑150 CCGAGCAGCAGGTGGCTGGCCATTTCGGCTTCTGCCACCAGTACCCGTACATCAGTCTCGATGCCATTGCCGGTGGTATCGCCCGGCAATTGCGGCAGGTCGTACAACAGCCAGTCGAAATGCTCGGCCAGCTCGACCTGG‑CGAGCGGGC > 1:1865596/1‑150 TGGCCATGTCGGCTTCTGCCACCAGTACCCGTACATCAGTCTCGATGCCATTGCCGGTGGTATCGCCCGGCAATTGCGGCAGGTCGTACAACAGCCAGTCGAAATGCTCGGCCCGCTCG‑CCAGGTCGAGCTGGCCGAGCATTTCGACTGG < 1:608967/150‑1 CCGTACATCAGTCTCGATGCCATTGCCGGTGGTATCGCCCGGCAATTGCGGCAGGTCGTACAACAGCCAGTCGAAATGCTCGGCCCGCTCG‑CCAGGTCGAGCTGGCCGAGCATTT > 1:1878841/1‑115 CCGTACATCAGTCTCGATGCCATTGCCGGTGGTATCGCCCGGCAATTGCGGCAGGTCGTACAACAGCCAGTCGAAATGCTCGGCCCGCTCG‑CCAGGTCGAGCTGGCCGAGCATTT < 2:1878841/115‑1 TCGGCCAGCTCGACCTGG‑CGAGCGGGCCGAGCATTTCGACTGGCTGTTGTACGACCTGCCGCAATTGCCGGGCGATACCACCGGCAATGGCATCGAGACTGATGTACGGGTACTGGTGGCAGAAGCCGAAATGGCCAGCCACCTGCTGCT > 2:1071067/1‑150 GCCAGCTCGACCTGG‑CGAGCGGGCCGAGCATTTCGACTGGCTGTTGTACGACCTGCCGCAATTGCCGGGCGATACCACCGGCAATGGCATCGAGACTGATGTACGGGTACTGGTGGCAGAAGCCGAAATGGCCAGCCACCTGCTGCTCGG > 1:1551154/1‑150 GGCCGAGCATTTCGACTGGCTGTTGTACGACCTGCCGCAATTGCCGGGCGATACCACCGGCAATGGCATCGAGACTGATGTACGGGTACTGGTGGCAGAAGCCGAAATGGCCAGCCACCTGCTGCTCGGGC‑GACGTCCGCTCGAGCACTT < 2:129065/150‑1 GGCCGAGCATTTCGACTGGCTGTTGTACGACCTGCCGCAATTGCCGGGCGATACCACCGGCAATGGCATCGAGACTGATGTACGGGTACTGGTGGCAGAAGCCGAAATGGCCAGCCACCTGCTGCTCGGGC‑GACGTCCGCTCGAGCACTT < 2:1710084/150‑1 GGCCGAGCATTTCGACTGGCCGTTGTACGACCTGCCGCAATGGCCGGGCGATACCACCGGCAATGGCATCGAGACTGATGTACGGGTACTAGTGGCAGAAGCCGAAATGGCCAGCCACCTGCTGCTCGGGC‑GACGTCCGCTCGAGCACTT > 2:97078/1‑150 CCGAGCATTTCGACTGGCTGTTGTACGACCTGCCGCAATTGCCGGGCGATACCACCGGCAATGGCATCGAGACTGATGTACGGGTACTGGTGGCAGAAGCCGAAATGGCCAGCCACCTGCTGCTCGAGCGGACGT‑CGCCCGAGCAgcagg < 1:1764118/150‑6 CGAGCATTTCGACTGGCTGTTGTACGACCTGCCGCAATTGCCGGGCGATACCACCGGCAATGGCATCGAGACTGATGTACGGGTACTGGTGGCAGAAGCCGAAATGGCCAGCCACCTGCTGCTCGGGC‑GACGTCCGCTCGAGCACTTCGA > 1:383743/1‑150 CGAGCATTTCGACTGGCTGTTGTACGACCTGCCGCAATTGCCGGGCGAGACCACCGGCAATGGCATCGAGACTGATGTACGGGTACTGGTGGCAGAAGCCGAAATGGCCAGCCACCTGCTGCTCGGGC‑GACGTCCGCTCGAGCACTTCGA > 1:904108/1‑150 GCCCGAGCAGCAGGTGGCTGGCCATTTCGGCTTCTGCCACCAGTACCCGTACATCAGTCTCGATGCCATTGCCGGTGGTATCGCCCGGCAATTGCGGCAGGTCGTACAACAGCCAGTCGAAATGCTCGGCCAGCTCGACCTGG‑CGAGCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3013261‑3013109‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccGAGCATTTCGACTGGCTGTTGTACGACCTGCCGCAATTGCCGGGCGATACCACCGGCAATGGCATCGAGACTGATGTACGGGTACTGGTGGCAGAAGCCGAAATGGCCAGCCACCTGCTGCTCGGGC‑GACGTCCGCTCGAGCACTTCGA > NC_002947/3013135‑3013283 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |