| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3676073 | 52 (0.700) | 6 (0.090) | 6/226 | NT | 10.9% | intergenic (+37/+55) | PP_3240/PP_5592 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 3676096 | 52 (0.780) | intergenic (+60/+32) | PP_3240/PP_5592 | hypothetical protein/hypothetical protein | |||||
GGCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3675922‑3676073‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgccggcaagcTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGGGT < NC_002947/3676096‑3675951 GGCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAA < 2:424094/150‑1 GCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAG > 2:816196/1‑150 CGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGTTAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGC < 2:153077/150‑1 GACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCCCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGG < 2:1520714/150‑1 AAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTT > 1:1105148/1‑97 AAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTT < 2:1105148/97‑1 TTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACC > 2:1239165/1‑96 TTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACC < 1:1239165/96‑1 CCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGG > 2:1495988/1‑53 CCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGG < 1:1495988/53‑1 GGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGG < 2:1134668/150‑1 GCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGG > 2:272198/1‑150 AAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGGGg > 1:1115444/1‑149 AAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGGGT < 1:578646/150‑1 GCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGGCCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAAT < 1:317721/80‑1 GCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGGCCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAAT > 2:317721/1‑80 CTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGG > 1:446114/1‑137 CTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGG < 2:446114/137‑1 GGCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3675922‑3676073‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgccggcaagcTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGGGT < NC_002947/3676096‑3675951 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |