New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3676073	52 (0.700)	6 (0.090)	6/226	NT	10.9%	intergenic (+37/+55)	PP_3240/PP_5592	hypothetical protein/hypothetical protein
	?	NC_002947	= 3676096	52 (0.780)					intergenic (+60/+32)	PP_3240/PP_5592	hypothetical protein/hypothetical protein

GGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACG  >  NC_002947/3675934‑3676221                                                                                                                                            |                                                                                                                                                     ggCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGAt                                                                                                                                            >  1:272198/1‑150 (MQ=255)     gACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCt                                                                                                                                        >  1:869214/1‑150 (MQ=255)      aCCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGTGATCCCtt                                                                                                                                       <  1:263182/150‑1 (MQ=255)       ccTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTg                                                                                                                                      <  1:729824/150‑1 (MQ=255)       ccTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTg                                                                                                                                      <  2:1583545/150‑1 (MQ=255)        cTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTgg                                                                                                                                     <  1:922066/150‑1 (MQ=255)        cTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTgg                                                                                                                                     >  2:1809503/1‑150 (MQ=255)                cGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGTTAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCtggttcccaagggatcgcacatggc                                                                                                                             <  2:153077‑M1/150‑26 (MQ=255)                  cccccgACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgctt                                                                                                                           >  1:1115444‑M2/2‑146 (MQ=255)                  aCCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgctt                                                                                                                           <  1:578646‑M2/150‑5 (MQ=255)                    cccGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGc                                                                                                                                               <  1:1080416/128‑1 (MQ=255)                    cccGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGc                                                                                                                                               >  2:1080416/1‑128 (MQ=255)                    cccGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgc                                                                                                                         >  2:272198‑M2/1‑144 (MQ=255)                     ccGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgcc                                                                                                                        <  2:1134668‑M2/150‑8 (MQ=255)                       gACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCCCGTCGCCGGCAAGCtggttcccaagggatcgcacatggcttgccgg                                                                                                                      <  2:1520714‑M1/150‑33 (MQ=255)                          tCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCACGCCATGTGCGATCCCTTg                                                                                                                                      >  1:1546238/1‑131 (MQ=255)                          tCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTg                                                                                                                                      <  2:1546238/131‑1 (MQ=255)                            cccGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAg                                                                                                                              <  2:446114‑M2/137‑2 (MQ=255)                            cccGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAg                                                                                                                              >  1:446114‑M2/1‑136 (MQ=255)                             ccGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACgg                                                                                                                >  1:1579692/1‑150 (MQ=255)                                     cGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACcaca                                                                                                        >  1:413556/1‑150 (MQ=255)                                       aaGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCNATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAga                                                                                                      <  1:1811050/150‑1 (MQ=255)                                       aaGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAga                                                                                                      <  2:173038/150‑1 (MQ=255)                                          aCCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAgacga                                                                                                   <  2:413556/150‑1 (MQ=255)                                           cccTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACAGTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAgacgac                                                                                                  <  2:516711/150‑1 (MQ=255)                                            ccTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAgacga                                                                                                   <  2:1921672/148‑1 (MQ=255)                                            ccTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAgacga                                                                                                   >  1:1921672/1‑148 (MQ=255)                                              tCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCACAAAGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGt                                                                                               >  1:1260688/1‑150 (MQ=255)                                                     gACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTcacca                                                                                                          <  2:926649/132‑1 (MQ=255)                                                     gACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTcacca                                                                                                          >  1:926649/1‑132 (MQ=255)                                                     gACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCGCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCtt                                                                                        <  1:1432546/150‑1 (MQ=255)                                                       cccNCAGGGGCCGGCCAAGCCGCCTAGACACATTGAGAAAAAGGAGTAAACCACGGCCTGGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCa                                                                                      <  1:1359090/150‑1 (MQ=255)                                                       cccACAGGGACCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCGCGTCGCCGACAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCa                                                                                      >  2:834239/1‑150 (MQ=255)                                                          acaGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAgcg                                                                                   >  1:25895/1‑150 (MQ=255)                                                                  cgcccAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGCACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCACCTggc                                                                           >  2:368326/4‑150 (MQ=255)                                                                    gccAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCAt                                                                                                                                                   <  2:549447/76‑1 (MQ=255)                                                                    gccAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCAt                                                                                                                                                   >  1:549447/1‑76 (MQ=255)                                                                       aaGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCtggttcccaagggatcgcacatggctt                                                                                                                           <  2:1105148‑M1/97‑28 (MQ=255)                                                                       aaGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCtggttcccaagggatcgcacatggctt                                                                                                                           >  1:1105148‑M1/1‑70 (MQ=255)                                                                         gccgccTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCctct                                                                    <  2:578646/150‑1 (MQ=255)                                                                           cgccTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTAc                                                                  <  1:816196/150‑1 (MQ=255)                                                                                 gagaCATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTAcgcccgc                                                            <  1:450862/150‑1 (MQ=255)                                                                                      aTTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGCCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgc                                                                                                                             >  2:317721‑M2/1‑78 (MQ=255)                                                                                      aTTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGCCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgc                                                                                                                             <  1:317721‑M2/80‑3 (MQ=255)                                                                                       ttGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCtggttcccaagggatcgcacatggcttgccggcgacgagacc                                                                                                            <  1:1239165‑M1/96‑43 (MQ=255)                                                                                       ttGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCtggttcccaagggatcgcacatggcttgccggcgacgagacc                                                                                                            >  2:1239165‑M1/1‑54 (MQ=255)                                                                                       ttGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGATGTGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGa                                                      <  1:17161/150‑1 (MQ=255)                                                                                         gagaAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACa                                                    <  1:1550183/150‑1 (MQ=255)                                                                                                 ggAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGGGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCCTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATc                                            <  2:212086/150‑1 (MQ=255)                                                                                                  gAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCg                                           >  2:570039/1‑150 (MQ=255)                                                                                                   aGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATcca                                          <  1:1809503/150‑3 (MQ=255)                                                                                                   aGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCgg                                          <  1:158619/150‑1 (MQ=255)                                                                                                    gTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCggg                                         <  2:1617713/150‑1 (MQ=255)                                                                                                        aCCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGTTCGGGTAGt                                     <  2:25895/150‑1 (MQ=255)                                                                                                            cGGTCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCAc                                 <  2:869214/150‑1 (MQ=255)                                                                                                              gCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGc                               <  2:1008517/150‑1 (MQ=255)                                                                                                               ccTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCAAGCt                              <  2:1547336/150‑1 (MQ=255)                                                                                                                 ttGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGa                            >  1:547137/1‑150 (MQ=255)                                                                                                                    aTTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCt                         >  1:435230/1‑150 (MQ=255)                                                                                                                      tACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTgg                       <  1:1803034/150‑1 (MQ=255)                                                                                                                        ccGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccgg                                                                                                                      <  1:1495988‑M2/53‑10 (MQ=255)                                                                                                                        ccGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccgg                                                                                                                      >  2:1495988‑M2/1‑44 (MQ=255)                                                                                                                        ccGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGt                      <  2:645653/149‑1 (MQ=255)                                                                                                                        ccGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGt                      >  1:645653/1‑149 (MQ=255)                                                                                                                         cGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGa                    >  2:296423/1‑150 (MQ=255)                                                                                                                          ggTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaa                                                                         <  1:1239165‑M2/96‑55 (MQ=255)                                                                                                                          ggTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaa                                                                         >  2:1239165‑M2/1‑42 (MQ=255)                                                                                                                             ctcGGCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCAt                <  1:282752/150‑1 (MQ=255)                                                                                                                               cgtcgCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTg              <  1:699796/150‑1 (MQ=255)                                                                                                                                    ccGGCAAGCtggttcccaagggatcgcacatggcttgccggcgacgagaccgg                                                                                                          >  2:1495988‑M1/1‑9 (MQ=255)                                                                                                                                    ccGGCAAGCtggttcccaagggatcgcacatggcttgccggcgacgagaccgg                                                                                                          <  1:1495988‑M1/53‑45 (MQ=255)                                                                                                                                    ccGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgggaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgtgggtcgacttgagggtcttcggcatccggggagtc         <  2:1520714‑M2/150‑119 (MQ=255)                                                                                                                                    ccGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTAc         >  2:1147704/1‑150 (MQ=255)                                                                                                                                    ccGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTAc         >  2:1140865/1‑150 (MQ=255)                                                                                                                                      ggCAAGCtggttcccaagggatcgcacatggcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgtgggtcgacttgagggtcttcggcatccggggagtcgg       <  2:1134668‑M1/150‑144 (MQ=255)                                                                                                                                       gCAAGCtggttcccaagggatcgcacatggcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgtgggtcgacttgagggtcttcggcatccggggagtcggg      >  2:272198‑M1/1‑6 (MQ=255)                                                                                                                                       gCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGc      >  2:882406/1‑150 (MQ=255)                                                                                                                                         aaGCtggttcccaagggatcgcacatggcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgtgggtcgacttgagggtcttcggcatccggggagtcggggt    <  1:578646‑M1/150‑147 (MQ=255)                                                                                                                                         aaGCtggttcccaagggatcgcacatggcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgtgggtcgacttgagggtcttcggcatccggggagtcggggg    >  1:1115444‑M1/1‑4 (MQ=255)                                                                                                                                         aaGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggctt                                                         >  1:1105148‑M2/1‑27 (MQ=255)                                                                                                                                         aaGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggctt                                                         <  2:1105148‑M2/97‑71 (MQ=255)                                                                                                                                           gCtggttcccaagggatcgcacatggcttgccggcgacgaggccggtaatcaaggccgtggtttactcctttttctcaat                                                                        >  2:317721‑M1/1‑2 (MQ=255)                                                                                                                                           gCtggttcccaagggatcgcacatggcttgccggcgacgaggccggtaatcaaggccgtggtttactcctttttctcaat                                                                        <  1:317721‑M1/80‑79 (MQ=255)                                                                                                                                           gCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttaacaatgtctctaggcggcttggccggcccctgtgggtcgacttgagggtcttcggcatccggggagtcggggtcg  <  2:153077‑M2/150‑126 (MQ=255)                                                                                                                                            ctggttcccaagggatcgcacatggcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgtgggtcgacttgagggtcttcggcatccggg              >  1:446114‑M1/1‑1 (MQ=255)                                                                                                                                            ctggttcccaagggatcgcacatggcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgtgggtcgacttgagggtcttcggcatccggg              <  2:446114‑M1/137‑137 (MQ=255)                                                                                                                                            |                                                                                                                                                     GGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACG  >  NC_002947/3675934‑3676221

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.