New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3676073	52 (0.700)	6 (0.090)	6/226	NT	10.9%	intergenic (+37/+55)	PP_3240/PP_5592	hypothetical protein/hypothetical protein
	?	NC_002947	= 3676096	52 (0.780)					intergenic (+60/+32)	PP_3240/PP_5592	hypothetical protein/hypothetical protein

ACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCATGAAT  >  NC_002947/3675951‑3676235                                                                                                                                                  |                                                                                                                                            cccccgACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgctt                                                                                                                                         >  1:1115444‑M2/2‑146 (MQ=255) aCCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgctt                                                                                                                                         <  1:578646‑M2/150‑5 (MQ=255)   cccGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgc                                                                                                                                       >  2:272198‑M2/1‑144 (MQ=255)    ccGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgcc                                                                                                                                      <  2:1134668‑M2/150‑8 (MQ=255)           cccGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAg                                                                                                                                            >  1:446114‑M2/1‑136 (MQ=255)           cccGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAg                                                                                                                                            <  2:446114‑M2/137‑2 (MQ=255)            ccGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACgg                                                                                                                              >  1:1579692/1‑150 (MQ=255)                    cGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACcaca                                                                                                                      >  1:413556/1‑150 (MQ=255)                      aaGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCNATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAga                                                                                                                    <  1:1811050/150‑1 (MQ=255)                      aaGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAga                                                                                                                    <  2:173038/150‑1 (MQ=255)                         aCCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAgacga                                                                                                                 <  2:413556/150‑1 (MQ=255)                          cccTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACAGTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAgacgac                                                                                                                <  2:516711/150‑1 (MQ=255)                           ccTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAgacga                                                                                                                 <  2:1921672/148‑1 (MQ=255)                           ccTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAgacga                                                                                                                 >  1:1921672/1‑148 (MQ=255)                             tCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCACAAAGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGt                                                                                                             >  1:1260688/1‑150 (MQ=255)                                    gACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTcacca                                                                                                                        <  2:926649/132‑1 (MQ=255)                                    gACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTcacca                                                                                                                        >  1:926649/1‑132 (MQ=255)                                    gACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCGCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCtt                                                                                                      <  1:1432546/150‑1 (MQ=255)                                      cccNCAGGGGCCGGCCAAGCCGCCTAGACACATTGAGAAAAAGGAGTAAACCACGGCCTGGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCa                                                                                                    <  1:1359090/150‑1 (MQ=255)                                      cccACAGGGACCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCGCGTCGCCGACAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCa                                                                                                    >  2:834239/1‑150 (MQ=255)                                         acaGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAgcg                                                                                                 >  1:25895/1‑150 (MQ=255)                                                 cgcccAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGCACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCACCTggc                                                                                         >  2:368326/4‑150 (MQ=255)                                                        gccgccTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCctct                                                                                  <  2:578646/150‑1 (MQ=255)                                                          cgccTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTAc                                                                                <  1:816196/150‑1 (MQ=255)                                                                gagaCATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTAcgcccgc                                                                          <  1:450862/150‑1 (MQ=255)                                                                     aTTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGCCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgc                                                                                                                                           >  2:317721‑M2/1‑78 (MQ=255)                                                                     aTTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGCCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgc                                                                                                                                           <  1:317721‑M2/80‑3 (MQ=255)                                                                      ttGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGATGTGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGa                                                                    <  1:17161/150‑1 (MQ=255)                                                                        gagaAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACa                                                                  <  1:1550183/150‑1 (MQ=255)                                                                                ggAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGGGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCCTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATc                                                          <  2:212086/150‑1 (MQ=255)                                                                                 gAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCg                                                         >  2:570039/1‑150 (MQ=255)                                                                                  aGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATcca                                                        <  1:1809503/150‑3 (MQ=255)                                                                                  aGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCgg                                                        <  1:158619/150‑1 (MQ=255)                                                                                   gTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCggg                                                       <  2:1617713/150‑1 (MQ=255)                                                                                       aCCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGTTCGGGTAGt                                                   <  2:25895/150‑1 (MQ=255)                                                                                           cGGTCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCAc                                               <  2:869214/150‑1 (MQ=255)                                                                                             gCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGc                                             <  2:1008517/150‑1 (MQ=255)                                                                                              ccTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCAAGCt                                            <  2:1547336/150‑1 (MQ=255)                                                                                                ttGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGa                                          >  1:547137/1‑150 (MQ=255)                                                                                                   aTTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCt                                       >  1:435230/1‑150 (MQ=255)                                                                                                     tACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTgg                                     <  1:1803034/150‑1 (MQ=255)                                                                                                       ccGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccgg                                                                                                                                    <  1:1495988‑M2/53‑10 (MQ=255)                                                                                                       ccGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccgg                                                                                                                                    >  2:1495988‑M2/1‑44 (MQ=255)                                                                                                       ccGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGt                                    >  1:645653/1‑149 (MQ=255)                                                                                                       ccGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGt                                    <  2:645653/149‑1 (MQ=255)                                                                                                        cGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGa                                  >  2:296423/1‑150 (MQ=255)                                                                                                         ggTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaa                                                                                       <  1:1239165‑M2/96‑55 (MQ=255)                                                                                                         ggTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaa                                                                                       >  2:1239165‑M2/1‑42 (MQ=255)                                                                                                            ctcGGCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCAt                              <  1:282752/150‑1 (MQ=255)                                                                                                              cgtcgCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTg                            <  1:699796/150‑1 (MQ=255)                                                                                                                   ccGGCAAGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgggaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggcttggccggcccctgtgggtcgacttgagggtcttcggcatccggggagtc                       <  2:1520714‑M2/150‑119 (MQ=255)                                                                                                                   ccGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTAc                       >  2:1147704/1‑150 (MQ=255)                                                                                                                   ccGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTAc                       >  2:1140865/1‑150 (MQ=255)                                                                                                                      gCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGc                    >  2:882406/1‑150 (MQ=255)                                                                                                                        aaGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggctt                                                                       >  1:1105148‑M2/1‑27 (MQ=255)                                                                                                                        aaGCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttctcaatgtctctaggcggctt                                                                       <  2:1105148‑M2/97‑71 (MQ=255)                                                                                                                          gCCATGTGCGATCCCTTGGGAACCAgcttgccggcgacgagaccggtaatcaaggccgtggtttactcctttttaacaatgtctctaggcggcttggccggcccctgtgggtcgacttgagggtcttcggcatccggggagtcggggtcg                <  2:153077‑M2/150‑126 (MQ=255)                                                                                                                             ttgtgCGATCCCTTGGGAACCAGCTTGAAGGCGCGGGTCATCACAGACGCTTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGCTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTa             <  2:1260688/149‑1 (MQ=255)                                                                                                                                tgCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGt                                                   >  2:1075244/1‑109 (MQ=255)                                                                                                                                tgCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGt                                                   <  1:1075244/109‑1 (MQ=255)                                                                                                                                 gCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCt                                                                                                       <  2:1214746/56‑1 (MQ=255)                                                                                                                                 gCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCt                                                                                                       >  1:1214746/1‑56 (MQ=255)                                                                                                                                    aTCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCAt      >  1:1556689/1‑150 (MQ=255)                                                                                                                                     tCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGa                                                                    >  1:925244/1‑87 (MQ=255)                                                                                                                                     tCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGa                                                                    <  2:925244/87‑1 (MQ=255)                                                                                                                                        cTTGGGAACCAGCTTGGCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCATGAAt  >  2:1459893/1‑150 (MQ=255)                                                                                                                                        cTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCATGAAt  <  1:1446768/150‑1 (MQ=255)                                                                                                                                           gggAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGc                    >  1:186063/1‑129 (MQ=255)                                                                                                                                           gggAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGc                    <  2:186063/129‑1 (MQ=255)                                                                                                                                                 cAGCTTGCCGGCGACGGTCACCACCGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTg                            >  2:1284913/1‑115 (MQ=255)                                                                                                                                                 cAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATc                                                          >  2:332364/1‑85 (MQ=255)                                                                                                                                                 cAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATc                                                          <  1:332364/85‑1 (MQ=255)                                                                                                                                                 cAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTg                            <  1:1284913/115‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                            ACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCCATGTGCGATCCCTTGGGAACCAGCTTGCCGGCGACGGTCACCACAGACGACTGTCAGCCTTCAGCGCGCCTGGCGGCCTCTACGCCCGCCGCCGACAGCTTGATCGGGTAGTGCACGCTGATCTGGTGATCATTGCTTACCGCCACGCTACCGTCATGAAT  >  NC_002947/3675951‑3676235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.