| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4775647 | 73 (0.980) | 8 (0.110) | 6/240 | NT | 10.2% | coding (3665/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
| ? | NC_002947 | = 4775655 | 72 (1.020) | coding (3657/10413 nt) | pvdD | non‑ribosomal peptide synthetase | |||||
GCGTAGTCGGCGTATTGCACCGCCAGCGCGGGCAGTTCGACGGCCTGCCCATGACGATAGCCCTGGTACAGCGCCACGAGCTCGTTGACCAGCACCGCCATCGACCAGCCATCGGTGATGATGTGGTGCAGGTTCATCACCAGCACATGCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4775494‑4775647‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcctTGAGGCCCAGGCGCATGTGCTGGTGATGAACCTGCACCACATCATCACCGATGGCTGGTCGATGGCGGTGCTGGTCAACGAGCTCGTGGCGCTGTACCAGGGCTATCGTCATGGGCAGGCCGTCGAACTGCCCGCGCTGGCGGTGCAA < NC_002947/4775655‑4775508 GCGTAGTCGGCGTATTGCACCGCCAGCGCGGGCAGTTCGACGGCCTGCCCATGACGATAGCCCTGGTACAGCGCCACGAGCTCGTTGACCAGCACCGCCATCGACCAGCCATCGGTGATGATGTGGTGCAGGTTCATCACCAGCACATGC < 1:1582240/150‑1 AGTCGGCGTATTGCACCGCCAGCGCGGGCAGTTCGACGGCCTGCCCATGACGATAGCCCTGGTACAGCGCCACGAGCTCGTTGACCAGCACCGCCATCGACCAGCCATCGGTGATGATGTGGTGCAGGTTCATCACCAGCACATGCGCCT < 2:1023360/150‑1 CAGCACCGCCATCGACCAGCCATCGGTGATGATGTGGTGCAGGTTCATCACCAGCACATGCGCCTTGAGGCCCAGGCGCAT < 1:905047/81‑1 CAGCACCGCCATCGACCAGCCATCGGTGATGATGTGGTGCAGGTTCATCACCAGCACATGCGCCTTGAGGCCCAGGCGCAT > 2:905047/1‑81 ATCGACCAGCCATCGGTGATGATGTGGTGCAGGTTCATCACCAGCACATGCGCCTTGAGGCCCAGGCGCA < 1:143410/70‑1 ATCGACCAGCCATCGGTGATGATGTGGTGCAGGTTCATCACCAGCACATGCGCCTTGAGGCCCAGGCGCA > 2:143410/1‑70 GACCAGCCATCGGTGATGATGTGGTGCAGGTTCATCACCAGCACATGCGCCTTGAGGCCCAGGCGCAT < 1:1004924/68‑1 GACCAGCCATCGGTGATGATGTGGTGCAGGTTCATCACCAGCACATGCGCCTTGAGGCCCAGGCGCAT > 2:1004924/1‑68 TGATGATGTGGTGCAGGTTCATCACCAGCACATGCGCCTTGAGGCCCAGGCGCAT > 1:1030495/1‑55 TGATGATGTGGTGCAGGTTCATCACCAGCACATGCGCCTTGAGGCCCAGGCGCAT < 2:1030495/55‑1 GCGCCTTGAGGCCCAGGCGCATGTGCTGGTGATGAACCTGCACCACATCATCACCGATGGCTGGTCGATGGCGGTGCTGGTCAACGAGCTCGTGGCGCTGTACCAGGGCTATCGTCATGGGCAGGCCGTCGAACTGCCCGCGCTGGCGGT < 1:600545/150‑1 CGCCTTGAGGCCCAGGCGCATGTGCTGGTGATGAACCTGCACCACATCATCACCGATGGCTGGTCGATGGCGGTGCTGGTCAACGAGCTCGTGGCGCTGTACCAGGGCTATCGTCATGGGCAGGCCGTCGAACTGCCCGCGCTGGCGGTG < 1:353744/150‑1 CTTGAGGCCCAGGCGCATGTGCTGGTGATGAACCTGCACCACATCATCACCGATGGCTGGTCGATGGCGGTGCTGGTCAACGAGCTCGTGGCGCTGTACCAGGGCTATCGTCATGGGCAGGCCGTCGAACTGCCCGCGCTGGCGGTGCAA > 1:7000/1‑150 CTTGAGGCCCAGGCGCATGTGCTGGTGATGAACCTGCACCACATCATCACCGATGGCTGGTCGATGGCGGTGCTGGTCAACGAGCTCGTGGCGCTGTACCAGGGCTATCGTCATGGGCAGGCCGTCGAACTGCCCGCGCTGGCGGTGCAA > 2:626730/1‑150 GCGTAGTCGGCGTATTGCACCGCCAGCGCGGGCAGTTCGACGGCCTGCCCATGACGATAGCCCTGGTACAGCGCCACGAGCTCGTTGACCAGCACCGCCATCGACCAGCCATCGGTGATGATGTGGTGCAGGTTCATCACCAGCACATGCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4775494‑4775647‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcctTGAGGCCCAGGCGCATGTGCTGGTGATGAACCTGCACCACATCATCACCGATGGCTGGTCGATGGCGGTGCTGGTCAACGAGCTCGTGGCGCTGTACCAGGGCTATCGTCATGGGCAGGCCGTCGAACTGCCCGCGCTGGCGGTGCAA < NC_002947/4775655‑4775508 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |