New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4848823 | 71 (0.950) | 5 (0.070) | 4/244 | NT | 6.3% | coding (78/1383 nt) | hemN | oxygen‑independent coproporphyrinogen III dehydrogenase |
? | NC_002947 | = 4848848 | 81 (1.130) | coding (103/1383 nt) | hemN | oxygen‑independent coproporphyrinogen III dehydrogenase |
GATACAAATCAACACAGTTTCCTACAGACGGCCATAGACTCCGGTGCACTGCTGCTCTTTCCGGGGACTACCCTCATGCTCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTACCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4848671‑4848823 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccaCCTCGCTGTGCAGTTGCACGGCGGTTGGGTAAGAGGTGTAGCGTGGCCCGGCGAGATCGTAGCGGCGGATCAGGTCGGTATCCCAACGGAGGTCGTCGAGCATGAGGGTAGTCCCCGGAAAGAGCAGCAGTGCACCGGAGTCTATGG < NC_002947/4848848‑4848702 GATACAAATCAACACAGTTTCCTACAGACGGCCATAGACTCCGGTGCACTGCTGCTCTTTCCGGGGACTACCCTCATGCTCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTAC < 1:1072985/150‑1 TACAAATCAACACAGTTTCCTACAGACGGCCATAGACTCCGGTGCACTGCTGCTCTTTCCGGGGACTACCCTCATGCTCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTACCC > 2:1419927/1‑150 ACAAATCAACACAGTTTCCTACAGACGACCATAGACTCCGGTGCACTGCTGCTCTTTCCGGGGACTACCCTCATGCTCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTACCCA > 1:127784/1‑150 CCATAGACTCCGGTGCACTGCTGCTCTTTCCGGGGACTACCCTCATGCTCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTACCCACCTCGCTGTGCAGTTGCACGGCGGTTGG < 1:1419927/150‑1 CCATAGACTCCGGTGCACTGCTGCTCTTTCCGGGGACTACCCTCATGCTCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTACCCACCTCGCTGTGCAGTTGCACGGCGGTTGG < 2:1742271/150‑1 AGACTCCGGTGCACTGCTGCTCTTTCCGGGGACTACCCTCATGCGCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTACCCACCTCGCTGTGCAGTTGCACGGCGGTTGGGTAA < 1:176273/150‑1 GCTACGATCTCGCCGGGCCACGCTACACCTCTTACCCACCTCGCTGTGCAGTTGCACGGCGGTT < 1:1773194/64‑1 GCTACGATCTCGCCGGGCCACGCTACACCTCTTACCCACCTCGCTGTGCAGTTGCACGGCGGTT > 2:1773194/1‑64 ACCCACCTCGCTGTGCAGTTGCACGGCGGTTGGGTAAGAGGTGTAGCGTGGCCCGGCGAGATCGTAGGGGCGTATCAGGTCGGTATCCCAACGGCGGTCGTCGAGCATGAGGGTAGTCCCCGGAAAGAGCAGCAGTGCACCGGAGTCTAT < 1:1875310/150‑1 ACCCACCTCGCTGTGCAGTTGCACGGCGGTTGGGTAAGAGGTGTAGCGTGGCCCGGCGAGATCGTAGCGGCGGATCAGGTCGGTATCCCAACGGAGGTCGTCGAGCATGAGGGTAGTCCCCGGAAAGAGCAGCAGTGCACCGGAGTCTAT < 1:142975/150‑1 ACCCACCTCGCTGTGCAGTTGCACGGCGGTTGGGTAAGAGGTGTAGCGTGGCCCGGCGAGATCGTAGCGGCGGATCAGGGCGGTATCCCAACGGAGGTCGTCGAGCATGAGGGTAGTCCCCGGAAAGAGCAGCAGTGCACCGGAGTCTAT > 2:832484/1‑150 CCACCTCGCTGTGCAGTTGCACGGCGGTTGGGTAAGAGGTGTAGCGTGGCCCGGCGAGATCGTAGCGGCGGATCAGGTCGGTATCCCAACGGAGGTCGTCGAGCATGAGGGTAGTCCCCGGAAAGAGCAGCAGTGCACCGGAGTCTATGG > 2:30976/1‑150 CCACCTCGCTGTGCAGTTGCACGGCGGTTGGGTAAGAGGTGTAGCGTGGCCCGGCGAG > 1:510723/1‑58 CCACCTCGCTGTGCAGTTGCACGGCGGTTGGGTAAGAGGTGTAGCGTGGCCCGGCGAG < 2:510723/58‑1 GATACAAATCAACACAGTTTCCTACAGACGGCCATAGACTCCGGTGCACTGCTGCTCTTTCCGGGGACTACCCTCATGCTCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTACCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4848671‑4848823 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccaCCTCGCTGTGCAGTTGCACGGCGGTTGGGTAAGAGGTGTAGCGTGGCCCGGCGAGATCGTAGCGGCGGATCAGGTCGGTATCCCAACGGAGGTCGTCGAGCATGAGGGTAGTCCCCGGAAAGAGCAGCAGTGCACCGGAGTCTATGG < NC_002947/4848848‑4848702 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |