| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5228684 | 78 (1.050) | 9 (0.120) | 9/248 | NT | 11.4% | coding (423/2391 nt) | PP_4606 | ferric siderophore receptor |
| ? | NC_002947 | = 5228712 | 64 (0.880) | coding (395/2391 nt) | PP_4606 | ferric siderophore receptor | |||||
ATAACCGTGTCGGATGTGCCGCCGAAGTTGTTGCCCTGGGTAATGCCACTGACGTTGGCCAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGG‑CCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5228535‑5228684‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccCGGCCAGCGCTTCGATCATGCGCGGCCAGGGCCCGAACCAGGACATCCCCCAGGCAATCAACGTGGTACCGGCCCAGGTCATCCGCGACCAGGCCCCGCGCAACCTCGATGATGCCCTGGCCAACGTCAGTGGCATTACCCAGGGCAA < NC_002947/5228712‑5228565 ATAACCGTGTCGGATGTGCCGCCGAAGTTGTTGCCCTGGGTAATGCCTCTGACGTTGGCCAGGGCATCACCGAGTTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGG‑CCC > 1:1774375/1‑150ATAACCGTGTCGGATGTGCCGCCGAAGTTGTTGCCCTGGGTAATGCCACTGACGTTGGCCAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTGGATTGCCTGGGGGATGTCCTGGTTCGGG‑CCC > 1:1409955/1‑150ATAACCGTGTCGGATATGCCGCCGAAGTTGTTGCCCACAGTCATGAAACCAACTTTGTCCAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGG‑CCC > 1:1774540/1‑150 GCCGAAGTTGTTGCCCTGGGTAATGCCACTGACGTTGGCCAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGG‑CCCCGGCCAGCGCTTCGATCATG > 1:1785958/1‑150 CCCTGGGTAATGCCACTGACGTTGGCCAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGG‑CCCCGGCCAGCGCTTCGATCATGCGCGGCCAGGGCC < 2:1785958/150‑1 CCTGGGTAATGCCACTGACGTTGGCCAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGG‑CCCCGGCCAGCGCTTCGATCATGCGCGGCCAGGGCCC < 1:1608493/150‑1 GATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCCCGGCCAGCGCTTCGATCATGCGCGGCCAGGGCCCGAACCA > 1:1206526/1‑96 GATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCCCGGCCAGCGCTTCGATCATGCGCGGCCAGGGCCCGAACCA < 2:1206526/96‑1 CTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGG‑CCCCGGCCAGCGCTTCGATCATGCGCGGCCAGGGC < 1:1872743/81‑1 CTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGG‑CCCCGGCCAGCGCTTCGATCATGCGCGGCCAGGGC > 2:1872743/1‑81 CTGGGGGATGTCCTGGTTCGGG‑CCCCGGCCAGCGCTTCGATCATGCGCGGCCA < 1:1895431/53‑1 CTGGGGGATGTCCTGGTTCGGG‑CCCCGGCCAGCGCTTCGATCATGCGCGGCCA > 2:1895431/1‑53 CCCCGGCCAGCGCTTCGATCATGCGCGGCCAGGGCCCGAACCAGGACATCCCCCAGGCAATCAACGTGGTACCGGCCCAGGTCATCCGCGACCAGGCCCCGCGCAACCTCGATGATGCCCTGGCCAACGTCAGTGGCATTACCCAGGGCA < 2:296221/150‑1 CCCGGCCAGCGCTTCGATCATGCGCGGCCAGGGCCCGAACCAGGACATCCCCCAGGCAATCAACGTGGTACCGGCCCAGGTCATCCGCGACCAGGCCCCGCGCAACCTCGATGATGCCCTGGCCAACGTCAGTGGCATTACCCAGGGCAA > 2:1396059/1‑150 ATAACCGTGTCGGATGTGCCGCCGAAGTTGTTGCCCTGGGTAATGCCACTGACGTTGGCCAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGG‑CCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5228535‑5228684‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccCGGCCAGCGCTTCGATCATGCGCGGCCAGGGCCCGAACCAGGACATCCCCCAGGCAATCAACGTGGTACCGGCCCAGGTCATCCGCGACCAGGCCCCGCGCAACCTCGATGATGCCCTGGCCAACGTCAGTGGCATTACCCAGGGCAA < NC_002947/5228712‑5228565 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |