| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5443554 = | 96 (1.290) | 6 (0.090) | 5/234 | NT | 7.0% | coding (1274/1989 nt) | PP_4781 | sensor histidine kinase |
| ? | NC_002947 | 5443595 = | 72 (1.050) | coding (1233/1989 nt) | PP_4781 | sensor histidine kinase | |||||
GCCTTGGAAGTGGCCTTGCTGTCGCTGGCACTGGCCGACCGCATCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAACTGAACCTGCAACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTCCTGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5443711‑5443554‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcctggccagTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACATGGTGA > NC_002947/5443595‑5443740 GCCTTGGAAGTGGCCTTGCTGTCGCTGGCACTGGCCGACCGCATCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAACTGAACCTGCAACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTC > 2:55123/1‑150GCCTTGGAAGTGGCCTTGCTGTCGCTGGCACTGGCCGACCGCATCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAACTGAACCTGCAACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTC > 1:606319/1‑150GCCTTGGAAGTGGCCTTGCTGTCGCTGGCACTGGCCGACCGCAGCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAACTGAACCTGCAACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTC > 2:414761/1‑150GCCTTGGAAGTAGCCTTGCTGTCGCTGGCACTGGCCGACTGCATCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAAATGAACCTGCAACTGGCCAGGAGCAATCTCCTGAAGGACGAGTTC > 2:667225/1‑150 CCTTGGAAGTGGCCTTGCTGTCGCTGGCACTGGCCGACCGCATCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAACTGAACCTGCAACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTCC < 1:209730/150‑1 CTTGGAAGTGGCCTTGCTGTCGCTGGCACTGGCCGACCGCATCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAACTGAACCTGCAACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTCCT < 2:1893061/150‑1 CTTGGAAGTGGCCTTGCTGTCGCTGGCACTGGCCGACCGCATCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAACTGAACCTGCAACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTCCT > 1:968824/1‑150 TTGGAAGTGGCCTTGCTGTCGCTGGCACTGGCCGACCGCATCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAACTGAACCTGCAACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTCCTG < 2:79777/150‑1 TTGGAAGTGGCCTTGCTGTCGCTGGCACTGGCCGACCGCATCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAACTGAACCTGCAACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTCCTG < 2:605113/150‑1 TTGGAAGTGGCCTTGCTGTCGCTGGCACTGGCCGACCGCATCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAACTGAACCTGCAACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTCCTG > 1:358563/1‑150 TTGGAAGTGGCCTTGCTGTCGCTGGCACTGGCCGACCGCATCAACAGCCCTTGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAACTGAACCTGCAACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTCCTG < 1:116602/150‑1 TGGAAGTGGCCTTGCTGTCGCTGGTACTGGCCGACCGCATCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAACTGAACCTGCAACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTCCTGG < 2:966197/150‑1 TGGAAGTGGCCTTGCTGTCGCTGGCACTGGCCGACCGCATCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGCCCAACTGAACCTGCAACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTCCTGG < 1:1078806/150‑1 GGAAGTGGCCTTGCTGTCGCTGGCACTGGCCGACCGCATCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAACTGAACCTGCAACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTCCTGGC < 1:1189533/150‑1 CTTGCTGTCGCTGGCACTGGCCGACCGCATCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAACTGAACCTGCAACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTCC > 1:949895/1‑137 CTTGCTGTCGCTCGCACTGGCCGACCGCATCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAACTGAACCTGCAACTGGCCAGGACCAATCGCCTGAAGGACGAGTTCC < 2:949895/137‑1 ACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTCCTGGCCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCAC > 2:1034567/1‑150 CAGGAGCAATCGCCTGAAGGACGAGTTCCTGGCCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTT < 1:1678303/108‑1 CAGGAGCAATCGCCTGAAGGACGAGTTCCTGGCCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTT > 2:1678303/1‑108 ATCGCCTGAAGGACGAGTTCCTGGCCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAAC > 1:1312426/1‑150 ATCGCCTGAAGGACGAGTTCCTGGCCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCA > 1:1799823/1‑93 ATCGCCTGAAGGACGAGTTCCTGGCCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCA < 2:1799823/93‑1 TCCTGGCCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACA < 2:1312967/150‑1 TCCTGGCCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACA > 2:857420/1‑150 TCCTGGCCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACA < 1:220866/150‑1 TCCTGGCCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCG > 2:1713466/1‑88 TCCTGGCCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCG < 1:1713466/88‑1 CCTGGCCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACAT < 1:1717455/150‑1 CTGGCCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCCGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACATG < 2:1312426/150‑1 CTGGCCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACATG > 1:78081/1‑150 TGGCCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACATGG > 1:1182967/1‑150 GGCCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACATGGT < 1:482339/150‑1 gCAGTTGCAGGTTCAGTTGCTCCGGCGTACGCCCAGTGTCGCGCAAGGTCTGGGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCTCTTCCAAGGCCGAACCCAGCTGGCTGGCATACATGGTGA < 2:658601/149‑1 CCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACATGGTG > 2:1798518/1‑149 CCAGTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACATGGTG < 1:1798518/149‑1 GCCTTGGAAGTGGCCTTGCTGTCGCTGGCACTGGCCGACCGCATCAACAGCCTGCGCGAGCAGCAGGCACAGACCTTGCGCGACACTGGGCGTACGCTGGAGCAACTGAACCTGCAACTGGCCAGGAGCAATCGCCTGAAGGACGAGTTCCTGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5443711‑5443554‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcctggccagTTGCAGGTTCAGTTGCTCCAGCGTACGCCCAGTGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACATGGTGA > NC_002947/5443595‑5443740 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |