New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5443554 =96 (1.290)6 (0.090) 5/234 NT 7.0% coding (1274/1989 nt) PP_4781 sensor histidine kinase
?NC_002947 5443595 = 72 (1.050)coding (1233/1989 nt) PP_4781 sensor histidine kinase

Only 100 of 117 total aligned reads displayed.

ACAGCCGTGTGATGGTACTGAGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACATGGTGATGAA  >  NC_002947/5443446‑5443744
                                                                                                                                                     |                                                                                                                                                       
gtggccttgctgtcgctggcactggccgaccgcatcaacagcctgcgcgagcagcaggcacagaccttgcgcgacactgggcgtacgctggagcaactgaacctgcaaCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGt                                                                                                                                                         >  2:1034567‑M1/109‑150 (MQ=255)
 caGCCGTGTGATGGTACTGAGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGtt                                                                                                                                                        <  1:956958/150‑1 (MQ=255)
  aGCCGTGTGATGGTACTGAGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCTAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTg                                                                                                                                                       >  1:99818/1‑150 (MQ=255)
    ccGTGTGATGGTACTGAGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCa                                                                                                                                                     <  2:1515192/150‑1 (MQ=255)
    ccGTGTGATGGTACTGAGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCa                                                                                                                                                     <  1:1443223/150‑1 (MQ=255)
     cGTGTGATGGTACTGAGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAg                                                                                                                                                    <  2:237329/150‑1 (MQ=255)
     cGTGTGATGGTACTGAGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAg                                                                                                                                                    <  2:1880184/150‑1 (MQ=255)
      gtgtGATGGTACTGAGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAgg                                                                                                                                                   <  1:547409/150‑1 (MQ=255)
           aTGGTACTGAGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAg                                                                                                                                             >  2:358563/1‑150 (MQ=255)
            tGGTACTGAGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCATGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGt                                                                                                                                            >  2:968824/1‑150 (MQ=255)
              gTACTGAGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAg                                                                                                                                                    >  2:1505406/1‑141 (MQ=255)
              gTACTGAGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAg                                                                                                                                                    <  1:1505406/141‑1 (MQ=255)
              gTACTGAGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTg                                                                                                                                          >  1:1722420/1‑150 (MQ=255)
                aCTGAGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGCCCAGTTGCAGTT‑TCAGTTGcc                                                                                                                                        >  2:409112/1‑149 (MQ=255)
                  tGAGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCCGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTcc                                                                                                                                      >  1:1545349/1‑150 (MQ=255)
                    aGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAg                                                                                                                                    >  2:220866/1‑150 (MQ=255)
                     gCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGc                                                                                                                                   <  1:1720770/150‑1 (MQ=255)
                        aTTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTa                                                                                                                                >  2:1429749/1‑150 (MQ=255)
                               cccccATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGGTTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAg                                                                                                                         >  1:414761/1‑150 (MQ=255)
                                ccccATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAg‑t                                                                                                                       >  1:1703076/1‑150 (MQ=255)
                                ccccATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAg‑t                                                                                                                       >  2:211280/1‑150 (MQ=255)
                                ccccATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAg‑t                                                                                                                       >  1:737613/1‑150 (MQ=255)
                                ccccATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTAATCGGGGTACGCAGCTCATGAGTCAGGCAGGCCAGGAAGTCGTCCTTCAGGCGGTGGTTCCTGGGCAGGTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCatt                                                                                                                        >  2:1653976/1‑148 (MQ=255)
                                   cgtCGGCCTGGTGTGCTGCAGCTCGAGCGAGCCAATACCTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTc                                                                                                                    <  2:659260/148‑1 (MQ=255)
                                   cATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTc                                                                                                                    <  1:77097/150‑1 (MQ=255)
                                   cATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTc                                                                                                                    <  1:1432994/150‑1 (MQ=255)
                                         caaggTGTGCATCTTCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCaa                                                                                                              >  2:933919/4‑150 (MQ=255)
                                                 gCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCtgtg                                                                                                      <  1:1291417/150‑1 (MQ=255)
                                                   aTCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGcc                                                                                                    <  1:545495/150‑1 (MQ=255)
                                                    tCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCct                                                                                                   >  1:1094959/1‑150 (MQ=255)
                                                      aGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCctgc                                                                                                 <  1:1429749/150‑1 (MQ=255)
                                                             gcgagcCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTcgc                                                                                          >  1:763418/1‑150 (MQ=255)
                                                               gagcCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCgcgc                                                                                        >  2:1371507/1‑150 (MQ=255)
                                                                   cAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGc                                                                                    >  1:1615260/1‑150 (MQ=255)
                                                                    aaTCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCAGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGCCAAAACTGGCTGCTCGCGCAGGCt                                                                                   >  1:1038476/1‑150 (MQ=255)
                                                                            cGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGc                                                                           >  2:1667487/1‑150 (MQ=255)
                                                                             gTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCg                                                                          >  2:1785727/1‑150 (MQ=255)
                                                                             gTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCg                                                                          >  2:764094/1‑150 (MQ=255)
                                                                             gTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCg                                                                          <  1:179676/150‑1 (MQ=255)
                                                                               tCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGt                                                                        <  2:1094959/150‑1 (MQ=255)
                                                                                cATCGGGGTACGCAGCTCATGAGTAAAGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGTATCA‑TTGCTCCAGCGCA‑ACACAGCTGAACCGGTAGCCCTTGGCCTGCTGCGCGCGCAGGCTGTTGATGCGGTc                                                                       <  1:330050/150‑1 (MQ=255)
                                                                                  tCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCgg                                                                     >  1:55123/1‑150 (MQ=255)
                                                                                      ggTACGCAGCTCATGAATCACGCTGGCCAGGAACTCGTCCTTAAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAg                                                                 >  1:629359/1‑150 (MQ=255)
                                                                                       gTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGt                                                                <  1:933919/150‑1 (MQ=255)
                                                                                           gCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCa                                                            >  2:482339/1‑150 (MQ=255)
                                                                                                tCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGAc                                                       >  1:248808/1‑150 (MQ=255)
                                                                                                      gTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGTTGCGGTCGGCCAGTGCCAGCGACAGCAAg                                                 <  2:489497/150‑1 (MQ=255)
                                                                                                      gTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAg                                                 <  1:227237/150‑1 (MQ=255)
                                                                                                      gTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAg                                                 <  2:1722420/150‑1 (MQ=255)
                                                                                                         aCGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGACCGCATGGCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGcc                                              >  1:1552501/1‑150 (MQ=255)
                                                                                                           actggccaggagcaatcgcctgaaggacgagttcctggccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCAc                                            >  2:1034567‑M2/43‑150 (MQ=255)
                                                                                                               GCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTcc                                        <  1:1189533‑M1/150‑1 (MQ=255)
                                                                                                                CCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGGGCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCa                                       <  1:1078806‑M1/150‑1 (MQ=255)
                                                                                                                CCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTACCAGCGACAGCAAGGCCACTTCCa                                       <  2:966197‑M1/150‑1 (MQ=255)
                                                                                                                 caggagcaatcgcctgaaggacgagttcctggccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGtt                                                                                >  2:1678303‑M2/37‑108 (MQ=255)
                                                                                                                 caggagcaatcgcctgaaggacgagttcctggccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGtt                                                                                <  1:1678303‑M2/72‑1 (MQ=255)
                                                                                                                 CAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCaa                                      <  2:605113‑M1/150‑1 (MQ=255)
                                                                                                                 CAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCaa                                      <  2:79777‑M1/150‑1 (MQ=255)
                                                                                                                 CAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCaa                                      >  1:358563‑M1/1‑150 (MQ=255)
                                                                                                                 CAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCAAGGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCaa                                      <  1:116602‑M1/150‑1 (MQ=255)
                                                                                                                  AGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAg                                     <  2:1893061‑M1/150‑1 (MQ=255)
                                                                                                                  AGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAg                                     >  1:968824‑M1/1‑150 (MQ=255)
                                                                                                                   GGAACTCGTCCTTCAGGCGATTGGTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCGAGCGACAGCAAg                                                 <  2:949895‑M1/137‑1 (MQ=255)
                                                                                                                   GGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAg                                                 >  1:949895‑M1/1‑137 (MQ=255)
                                                                                                                   GGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAgg                                    <  1:209730‑M1/150‑1 (MQ=255)
                                                                                                                    GAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGCTGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGc                                   >  2:414761‑M1/1‑150 (MQ=255)
                                                                                                                    GAACTCGTCCTTCAGGAGATTGCTCCTGGCCAGTTGCAGGT‑TCATTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCAGTCGGCCAGTGCCAGCGACAGCAAGGCTACTTCCAAGGc                                   >  2:667225‑M1/1‑150 (MQ=255)
                                                                                                                       cTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGa                                >  2:453198/1‑150 (MQ=255)
                                                                                                                        tCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGaa                               >  1:1307561/1‑150 (MQ=255)
                                                                                                                        tCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGaa                               <  1:1072485/150‑1 (MQ=255)
                                                                                                                         atcgcctgaaggacgagttcctggccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCa                                                                                       <  2:1799823‑M2/65‑1 (MQ=255)
                                                                                                                         atcgcctgaaggacgagttcctggccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCa                                                                                       >  1:1799823‑M2/29‑93 (MQ=255)
                                                                                                                         atcgcctgaaggacgagttcctggccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAAc                              >  1:1312426‑M2/29‑150 (MQ=255)
                                                                                                                          gTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAAcc                             >  1:980868/1‑150 (MQ=255)
                                                                                                                          gTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAAcc                             >  1:1847594/1‑150 (MQ=255)
                                                                                                                          gTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAAcc                             <  2:1466061/150‑1 (MQ=255)
                                                                                                                          gTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAAcc                             <  1:999069/150‑1 (MQ=255)
                                                                                                                          gTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAAcc                             <  1:676892/150‑1 (MQ=255)
                                                                                                                           tCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCa                                                                                       <  1:1061517/91‑1 (MQ=255)
                                                                                                                           tCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCa                                                                                       >  2:1061517/1‑91 (MQ=255)
                                                                                                                              ttCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTTGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAgc                         <  2:1615260/150‑1 (MQ=255)
                                                                                                                              ttCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAgc                         >  1:1327567/1‑150 (MQ=255)
                                                                                                                              ttCAGGCGATTGCTCCCGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCaa                                      <  1:1435802/137‑1 (MQ=255)
                                                                                                                                   gCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAgctggct                    <  1:453198/150‑1 (MQ=255)
                                                                                                                                   gCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAgctggct                    >  2:1220372/1‑150 (MQ=255)
                                                                                                                                    cGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAgctggctg                   <  2:1883074/150‑1 (MQ=255)
                                                                                                                                          cTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAgg                                                >  1:1429019/1‑115 (MQ=255)
                                                                                                                                          cTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAgg                                                <  2:1429019/115‑1 (MQ=255)
                                                                                                                                           tcctggccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCg                                                                          >  2:1713466‑M2/11‑88 (MQ=255)
                                                                                                                                           tcctggccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCg                                                                          <  1:1713466‑M2/78‑1 (MQ=255)
                                                                                                                                           tcctggccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACa            >  2:857420‑M2/11‑150 (MQ=255)
                                                                                                                                           tcctggccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACa            <  2:1312967‑M2/140‑1 (MQ=255)
                                                                                                                                           tcctggccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACa            <  1:220866‑M2/140‑1 (MQ=255)
                                                                                                                                             ctggccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCCGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACATg          <  2:1312426‑M2/142‑1 (MQ=255)
                                                                                                                                             ctggccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACATg          >  1:78081‑M2/9‑150 (MQ=255)
                                                                                                                                              tggccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACATgg         >  1:1182967‑M2/8‑150 (MQ=255)
                                                                                                                                               ggccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACATGGt        <  1:482339‑M2/144‑1 (MQ=255)
                                                                                                                                                 gcagTTGCAGGT‑TCAGTTGCTCCGGCGTACGCCCAG‑TGTCGCGCAAGGTCTGGGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCTCTTCCAAGGCCGAACCCAGCTGGCTGGCATACATGGtga      <  2:658601‑M2/146‑1 (MQ=255)
                                                                                                                                                 ccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACATGGtg       <  1:1798518‑M2/145‑1 (MQ=255)
                                                                                                                                                 ccagTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACATGGtg       >  2:1798518‑M2/5‑149 (MQ=255)
                                                                                                                                                     |                                                                                                                                                       
ACAGCCGTGTGATGGTACTGAGCCATTTCAGCCCCCATCGGCAGGGTGTGCATCAGCTCGAGCGAGCCAATCACTCCGTTCATCGGGGTACGCAGCTCATGAGTCACGCTGGCCAGGAACTCGTCCTTCAGGCGATTGCTCCTGGCCAGTTGCAGGT‑TCAGTTGCTCCAGCGTACGCCCAG‑TGTCGCGCAAGGTCTGTGCCTGCTGCTCGCGCAGGCTGTTGATGCGGTCGGCCAGTGCCAGCGACAGCAAGGCCACTTCCAAGGCCGAACCCAGCTGGCTGGCATACATGGTGATGAA  >  NC_002947/5443446‑5443744

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.