| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5584582 = | 77 (1.030) | 5 (0.070) | 5/242 | NT | 6.9% | coding (1201/2259 nt) | parC | DNA topoisomerase IV subunit A |
| ? | NC_002947 | 5584605 = | 62 (0.870) | coding (1178/2259 nt) | parC | DNA topoisomerase IV subunit A | |||||
CGAACCCTATTGGTGGAGTGGCTGGAGTTCCGCACCAATACCGTTCGTCGCCGCCTGCAGCATCGTCTGGATAAGGTCGAGAAGCGTCTGCACCTGTTGGACGGTTTGCTCACTGCATTCCTCAACCTGGATGAAGT‑GATCCACATCATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5584732‑5584582‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcatccAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCGACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGGGTTCGCAGGTTTTTCAACTGCGGCC > NC_002947/5584605‑5584752 CGAACCCTATTGGTGGAGTGGCTGGAGTTCCGCACCAATACCGTTCGTCGCCGCCTGCAGCATCGTCTGGATAAGGTCGAGAAGCGTCTGCACCTGTTCGACGGTTTGCTCACTGCATTCCTCAACCTGGATGAAGT‑GATCCACATCATC < 1:336659/150‑1 GATAAGGTCGAGAAGCGTCTGCACCTGTTGGACGGTTTGCTCACTGCATTCCTCAACCTGGATGATGTGGAT‑CACTTCATCCAGGTTGAGGAAT < 2:602327/94‑1 GATAAGGTCGAGAAGCGTCTGCACCTGTTGGACGGTTTGCTCACTGCATTCCTCAACCTGGATGATGTGGAT‑CACTTCAGCCAGGTTGAGGAAT > 1:602327/1‑94 GGATGAAGT‑GATCCACATCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCGACCTTATCCAGACGATGCTGCAGGCGGCGACTAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGGGTTC > 1:840675/1‑150 GATGAAGT‑GATCCACATCATCCAGGTTGAGGAATGCAGTGA < 1:970141/41‑1 GATGAAGT‑GATCCACATCATCCAGGTTGAGGAATGCAGTGA > 2:970141/1‑41 ATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCGACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGC < 1:6840/101‑1 ATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCGACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGC < 1:941656/101‑1 ATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCGACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGC > 2:6840/1‑101 ATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCGACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGC > 2:941656/1‑101 ATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCGACCTTATCCAGACGATGCTGCAGGCGAAGCCAAAAGGT‑CTGATGTGAAAGCTTCAGCCACTCCACCAATAGGGTTCGCAGGTTTTTCAACTGCGG > 1:1377324/1‑150 TCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCGACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGG > 1:1705503/1‑126 TCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCGACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGG < 2:1705503/126‑1 CCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCGACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGGGTTCGCAGGTTTTTCAACTGCGGCC < 2:934851/150‑1 CGAACCCTATTGGTGGAGTGGCTGGAGTTCCGCACCAATACCGTTCGTCGCCGCCTGCAGCATCGTCTGGATAAGGTCGAGAAGCGTCTGCACCTGTTGGACGGTTTGCTCACTGCATTCCTCAACCTGGATGAAGT‑GATCCACATCATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5584732‑5584582‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcatccAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCGACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGGGTTCGCAGGTTTTTCAACTGCGGCC > NC_002947/5584605‑5584752 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |