New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5584582 =	77 (1.030)	5 (0.070)	5/242	NT	6.9%	coding (1201/2259 nt)	parC	DNA topoisomerase IV subunit A
	?	NC_002947	5584605 =	62 (0.870)					coding (1178/2259 nt)	parC	DNA topoisomerase IV subunit A

CCGCGGATCTTCATCTCTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGGGTTCGCAGGTTTTTCAACTGCGGCCGG  >  NC_002947/5584458‑5584754                                                                                                                                                     |                                                                                                                                                        ccGCGGATCTTCATCTCTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAgg                                                                                                                                                       <  2:1747849/150‑1 (MQ=255)   gcgGATCTTCATCTCTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGtt                                                                                                                                                     >  2:1804044/1‑150 (MQ=255)   gcgGATCTTCATCTCTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGtt                                                                                                                                                     >  1:1305260/1‑150 (MQ=255)     ggATCTTCATCTCTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGa                                                                                                                                                   <  1:1303113/150‑1 (MQ=255)      gATCTTCATCTCTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACTGATGATGTGGATC‑ACTTCATCCAGGTTGAg                                                                                                                                                  <  1:1240600/150‑1 (MQ=255)         cTTCATCTCTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGaa                                                                                                                                               <  1:1276449/150‑1 (MQ=255)           tCATCTCTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATg                                                                                                                                             >  2:234442/1‑150 (MQ=255)           tCATCTCTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATg                                                                                                                                             <  2:1236107/150‑1 (MQ=255)           tCATCTCTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATg                                                                                                                                             >  1:1393644/1‑150 (MQ=255)              tctcTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAg                                                                                                                                          >  1:934851/1‑150 (MQ=255)                 ctcccAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGa                                                                                                                                       <  2:1426566/147‑1 (MQ=255)                 ctTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGa                                                                                                                                       <  1:1384876/150‑1 (MQ=255)                  ttCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGGTGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAg                                                                                                                                      >  1:230070/1‑150 (MQ=255)                   tCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGc                                                                                                                                     <  1:1210044/150‑1 (MQ=255)                        gcgcgcCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAAcc                                                                                                                                <  1:1804044/150‑1 (MQ=255)                          gcgcCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGt                                                                                                                              >  2:1872628/1‑150 (MQ=255)                           cgcCCACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATTATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTc                                                                                                                             <  2:739250/150‑1 (MQ=255)                              cAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCaa                                                                                                                          >  2:620047/1‑150 (MQ=255)                              cAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATATCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGCTATTCCTCCGTCCCCCAGCGCTGAGTC‑ACGGCGGCCAGGTTGGGGATTTCAGTGAGCAAACCGTCCac                                                                                                                          >  2:1260446/1‑149 (MQ=255)                                     cGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGc                                                                                                                   >  1:600177/1‑150 (MQ=255)                                     cGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGc                                                                                                                   >  1:338321/1‑150 (MQ=255)                                        aGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGa                                                                                                                <  2:1305260/150‑1 (MQ=255)                                             ggTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCtt                                                                                                           <  1:620047/150‑1 (MQ=255)                                                 tcGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCg                                                                                                       >  1:531882/1‑150 (MQ=255)                                                  cGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑a                                                                                                     <  1:1872628/150‑1 (MQ=255)                                                  cGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑a                                                                                                     >  2:1272119/1‑150 (MQ=255)                                                  cGAGGATGTAGTCGGCCTATATCTTGGTCATCTCTAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑a                                                                                                     <  2:620931/150‑1 (MQ=255)                                                   gAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑Ac                                                                                                    <  2:1862177/150‑1 (MQ=255)                                                   gAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑Ac                                                                                                    >  1:620931/1‑150 (MQ=255)                                                        tGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTAt                                                                                               >  2:85311/1‑150 (MQ=255)                                                           aGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCa                                                                                            >  1:1305764/1‑150 (MQ=255)                                                             tCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑Ac                                                                                                    >  2:1712805/1‑140 (MQ=255)                                                             tCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑Ac                                                                                                    <  1:1712805/140‑1 (MQ=255)                                                                 ccTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAAt                                                                                                                                              >  1:1026073/1‑95 (MQ=255)                                                                 ccTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAAt                                                                                                                                              <  2:1026073/95‑1 (MQ=255)                                                                  cTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGAtg                                                                                     >  1:801415/1‑150 (MQ=255)                                                                  cTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGAtg                                                                                     >  1:1457604/1‑150 (MQ=255)                                                                   gataaggtcgagaagcgtctgcacctgttggacggtttgctcactgcattcctcaacctggatgatgtggatcacttcatccAGGTTGAGGAAt                                                                                                                                              <  2:602327‑M2/12‑1 (MQ=255)                                                                   gataaggtcgagaagcgtctgcacctgttggacggtttgctcactgcattcctcaacctggatgatgtggatcacttcagccAGGTTGAGGAAt                                                                                                                                              >  1:602327‑M2/83‑94 (MQ=255)                                                                       tctcGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCa                                                                                >  1:553508/1‑150 (MQ=255)                                                                         tcGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAgg                                                                              >  1:1724109/1‑150 (MQ=255)                                                                               aGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGcga                                                                        >  2:855574/1‑150 (MQ=255)                                                                                gCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGcgac                                                                       >  2:1845939/1‑150 (MQ=255)                                                                                 cTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCCTCCAACAGGAGCAGACAC‑TCGCGTACTGGATCCAGACGAGGTTGCAGGCGGcgacg                                                                      >  2:496359/1‑150 (MQ=255)                                                                                  tCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGcgacga                                                                     >  1:729606/1‑150 (MQ=255)                                                                                   cGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGaa                                                                    <  1:85311/150‑1 (MQ=255)                                                                                     aaaCGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACg                                                                  >  2:1304335/1‑150 (MQ=255)                                                                                          ttCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTAtt                                                             >  1:1123463/1‑150 (MQ=255)                                                                                           tCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACCGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTg                                                            <  1:234442/150‑1 (MQ=255)                                                                                              aTCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTg                                                         >  2:1085386/1‑150 (MQ=255)                                                                                               tCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCACCTTCAGACTATGCTGCAGGCGGCGACGAACGGTATTGGTGc                                                        >  2:628003/1‑150 (MQ=255)                                                                                                      cTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTc                                                <  1:1304335/150‑1 (MQ=255)                                                                                                         cTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTcc                                                                                                                            >  2:17433/1‑73 (MQ=255)                                                                                                         cTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTcc                                                                                                                            <  1:17433/73‑1 (MQ=255)                                                                                                         cTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTAAGCGAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAg                                             <  1:1260446/150‑1 (MQ=255)                                                                                                          ttGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGc                                            >  1:472354/1‑150 (MQ=255)                                                                                                            gggATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCa                                          >  1:1334621/1‑150 (MQ=255)                                                                                                              gATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCt                                                                                                  >  1:1320737/1‑93 (MQ=255)                                                                                                              gATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCt                                                                                                  <  2:1320737/93‑1 (MQ=255)                                                                                                              gATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACt                                        >  2:1107036/1‑150 (MQ=255)                                                                                                              gATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATACAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACt                                        >  2:1164592/1‑150 (MQ=255)                                                                                                               atatTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTc                                       <  2:230070/150‑1 (MQ=255)                                                                                                                 attcctcaacctGGCTGAAGTG‑ATCCACATCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATc                                                                                              >  1:602327‑M1/13‑94 (MQ=255)                                                                                                                 attcctcaacctGGATGAAGTG‑ATCCACATCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATc                                                                                              <  2:602327‑M1/82‑1 (MQ=255)                                                                                                                       ctgTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATa                               <  2:204828/148‑1 (MQ=255)                                                                                                                              ggatgaagtgatccacatcatccAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACTAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGGGTTc                         >  1:840675‑M2/24‑150 (MQ=255)                                                                                                                              GATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCGAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGGGTTCg                        <  1:336659‑M1/150‑1 (MQ=255)                                                                                                                               gatgaagtgatccacatcatccAGGTTGAGGAATGCAGTGa                                                                                                                                       >  2:970141‑M2/23‑41 (MQ=255)                                                                                                                               gatgaagtgatccacatcatccAGGTTGAGGAATGCAGTGa                                                                                                                                       <  1:970141‑M2/19‑1 (MQ=255)                                                                                                                                      ggATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGGGTTCGCAGGtttt                <  2:801415/150‑1 (MQ=255)                                                                                                                                       gATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGGGTTCGCAGGttttt               <  2:1457604/150‑1 (MQ=255)                                                                                                                                       gATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGGGTTCGCAGGttttt               <  2:1025896/150‑1 (MQ=255)                                                                                                                                        aTC‑ACGTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGGGTTCGCAGGTTTTTc              <  1:1575170/150‑1 (MQ=255)                                                                                                                                               tcagcgaGGTTGAGGAATGCAGTGAGCAAACCGTCCAACGGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGAGGCTGCCGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGGGTTCGCAGGTTTTTCAACTGc        <  2:1675547/144‑1 (MQ=255)                                                                                                                                                 atccAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGc                                                        <  1:941656‑M2/97‑1 (MQ=255)                                                                                                                                                 atccAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGc                                                        >  2:6840‑M2/5‑101 (MQ=255)                                                                                                                                                 atccAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGc                                                        <  1:6840‑M2/97‑1 (MQ=255)                                                                                                                                                 atccAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGc                                                        >  2:941656‑M2/5‑101 (MQ=255)                                                                                                                                                 atccAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGAAGCCAAAAGGT‑CTGATGTGAAAGCTTCAGCCACTCCACCAATAGGGTTCGCAGGTTTTTCAACTGCgg      >  1:1377324‑M2/5‑150 (MQ=255)                                                                                                                                                  tccAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAgg                             <  2:1705503‑M2/123‑1 (MQ=255)                                                                                                                                                  tccAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAgg                             >  1:1705503‑M2/4‑126 (MQ=255)                                                                                                                                                   ccAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGGGTTCGCAGGTTTTTCAACTGCGGcc    <  2:934851‑M2/148‑1 (MQ=255)                                                                                                                                                     aGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGGGTTCGCAGGTTTTTCAACTGcggccgg  <  2:1305764/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                        CCGCGGATCTTCATCTCTTCCAGGCGCGCCAACTGCCGCAGGCGGGTCTCGAGGATGTAGTCGGCCTGTATCTCGGTCAGCTCGAAACGTTCGATCAGGGCCTGCTTGGGATATTCCTCGGTACGGATGATGTGGATC‑ACTTCATCCAGGTTGAGGAATGCAGTGAGCAAACCGTCCAACAGGTGCAGACGCTTCTCG‑ACCTTATCCAGACGATGCTGCAGGCGGCGACGAACGGTATTGGTGCGGAA‑CTCCAGCCACTCCACCAATAGGGTTCGCAGGTTTTTCAACTGCGGCCGG  >  NC_002947/5584458‑5584754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.