| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5795530 = | 89 (1.190) | 5 (0.070) | 4/242 | NT | 6.1% | coding (2426/4446 nt) | gltB | L‑glutamate synthase subunit alpha |
| ? | NC_002947 | 5795555 = | 70 (0.990) | coding (2401/4446 nt) | gltB | L‑glutamate synthase subunit alpha | |||||
ACCTGGAAAACGACCAGAAGCTGCTGGCGGCCGAAGCCTGGAGCGCGCGCAAGCCGATCCAGCAAGGTGGCCTGCTGAAGTTCGTCCACGGTGGCGAATACCACGCCTACAACCCGGACGTGGTCAACACCCTGCAAGCGGCTGTGCAGCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5795683‑5795530‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagggTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCC > NC_002947/5795555‑5795700 ACCTGGAAAACGAACAGAAGCTGCTGGCGGCCGAAGCCTGGAGCGCGCGCAAGCCGATCCAGCAAGGTGGCCTGCTGAAGTTCGTCCACGGTGGCGAATACCACGCCTACAACCCGGACGTGGTCAACACCCTGCAAGCGGCTGTGCAGC > 2:392280/1‑150 CTGCTGGCGGCCGAAGCCTGGAGCGCGCGCAAGCCGATCCAGCAAGGTGGCCTGCTGAAGTTCGTCCACGGTGGCGAATACCACGCCTACAACCCGGACGTGGTCAACACCCTGCAAGCGGCTGTGCAGC > 1:1321404/1‑130 CTGCTGGCGGCCGAAGCCTGGAGCGCGCGCAAGCCGATCCAGCAAGGTGGCCTGCTGAAGTTCGTCCACGGTGGCGAATACCACGCCTACAACCCGGACGTGGTCAACACCCTGCAAGCGGCTGTGCAGC < 2:1321404/130‑1 CTGGAGCGCGCGCAAGCCGATCCAGCAAGGTGGCCTGCTGAAGTTCGTCCACGGTGGCGAATACCACGCCTACAACCCGGACGTGGTCAACACCCTGCAAGCGGCTGTGCAGCAGG < 1:1347953/116‑1 CTGGAGCGCGCGCAAGCCGATCCAGCAAGGTGGCCTGCTGAAGTTCGTCCACGGTGGCGAATACCACGCCTACAACCCGGACGTGGTCAACACCCTGCAAGCGGCGGTGCAGCAGG > 2:1347953/1‑116 TCAACACCCTGCAAGCGGCTGTGCAGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCG > 1:1261865/1‑150 TCAACACCCTGCAAGCGGCTGTGCAGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATC > 1:1191513/1‑105 TCAACACCCTGCAAGCGGCTGTGCAGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATC < 2:1191513/105‑1 CCTGCAAGCGGCTGTGCAGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTC > 1:508157/1‑58 CCTGCAAGCGGCTGTGCAGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTC < 2:508157/58‑1 GCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACCTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCTGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCACGTCTTCGAAGCGCGCAC < 2:664827/150‑1 AGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGGCGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGACGCGCGCACCC > 2:360472/1‑150 AGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGGCTTGGAAGCGCGCACgc < 2:1261865/150‑3 ACCTGGAAAACGACCAGAAGCTGCTGGCGGCCGAAGCCTGGAGCGCGCGCAAGCCGATCCAGCAAGGTGGCCTGCTGAAGTTCGTCCACGGTGGCGAATACCACGCCTACAACCCGGACGTGGTCAACACCCTGCAAGCGGCTGTGCAGCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5795683‑5795530‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagggTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCC > NC_002947/5795555‑5795700 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |