New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	688878 =	83 (1.110)	5 (0.070)	4/244	NT	5.8%	intergenic (+371/‑80)	PP_5446/PP_0590	hypothetical protein/ArsR family transcriptional regulator
	?	NC_002947	688908 =	83 (1.160)					intergenic (+401/‑50)	PP_5446/PP_0590	hypothetical protein/ArsR family transcriptional regulator

CGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTTGT  >  NC_002947/688729‑689027                                                                                                                                                      |                                                                                                                                                           cGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAgccagg                                                                                                                                                            >  1:1361216/1‑150 (MQ=255)   gTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTAGCGAgccaggcc                                                                                                                                                          >  1:1214142/1‑150 (MQ=255)     cgtggtgtgccatcgatcaatgcccacaacatggcactgcgcttggggtcggccatcaggctggcaatttggctgatactgctggctgcgttcatgtccttataactccctgcaagttcacggtggggatgcgatggccaaccctgccag                                                                                                                                                        >  2:826705‑M1/146‑150 (MQ=255)      ccTTGTTTGACTTGGTTCGGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTAGGACGGCATCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑t                                                                                                                                                  <  2:368077/150‑1 (MQ=255)       cTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑Tg                                                                                                                                                 >  2:242919/1‑150 (MQ=255)       cTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑Tg                                                                                                                                                 >  1:1358602/1‑150 (MQ=255)         tGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGcc                                                                                                                                               >  2:1023995/1‑150 (MQ=255)              gACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCga                                                                                                                                          <  1:1721280/150‑1 (MQ=255)              ccatcgatcaatgcccacaacatggcactgcgcttggggtcggccatcaggctggcaatttggctgatactgctggctgcgttcatgtccttataactccctgcaagttcacggtggggatgcgatggccaaccctgccag                                                                                                                                                        >  2:1346015‑M1/137‑141 (MQ=255)              ccatcgatcaatgcccacaacatggcactgcgcttggggtcggccatcaggctggcaatttggctgatactgctggctgcgttcatgtccttataactccctgcaagttcacggtggggatgcgatggccaaccctgccag                                                                                                                                                        <  1:1346015‑M1/5‑1 (MQ=255)               aCTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCgag                                                                                                                                         >  1:486619/1‑150 (MQ=255)                 ttGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGGAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGagag                                                                                                                                       >  1:1523439/1‑150 (MQ=255)                  tGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAgg                                                                                                                                      >  2:15263/1‑150 (MQ=255)                    gTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGgcg                                                                                                                                    <  1:1023995/150‑1 (MQ=255)                       ccGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCtt                                                                                                                                 >  1:1229741/1‑150 (MQ=255)                         ggggCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTTTTTTTTTTTTCGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTcc                                                                                                                               >  2:1111058/1‑150 (MQ=255)                              gTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGagag                                                                                                                                       <  1:1607988/137‑1 (MQ=255)                              gTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGagag                                                                                                                                       >  2:1607988/1‑137 (MQ=255)                               ttttCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCa                                                                                                                         <  1:242919/150‑1 (MQ=255)                               ttttCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCa                                                                                                                         >  2:896372/1‑150 (MQ=255)                                    gacgCCGCTCCGCTGCTTGCAATGGGTAGGCATACCCAATAGATTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGACGGTATTCTGCGGCTTAAACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGCGGCTTTTCCCTGGCAGGttt                                                                                                                    >  2:752913/4‑150 (MQ=255)                                    gAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGtt                                                                                                                    >  1:1847402/1‑150 (MQ=255)                                     ggcactgcgcttggggtcggccatcaggctggcaatttggctgatactgctggctgcgttcatgtccttataactccctgcaagttcacggtggggatgcgatggccaaccctGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAg                                                                                                                        >  2:195389‑M1/114‑150 (MQ=255)                                     ggcactgcgcttggggtcggccatcaggctggcaatttggctgatactgctggctgcgttcatgtccttataactccctgcaagttcacggtggggatgcgatggccaaccctGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAg                                                                                                                        >  2:460773‑M1/114‑150 (MQ=255)                                     ggcactgcgcttggggtcggccatcaggctggcaatttggctgatactgctggctgcgttcatgtccttataactccctgcaagttcacggtggggatgcgatggccaaccctGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTg                                                                                                                   >  1:1218131‑M1/114‑150 (MQ=255)                                        ccGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGcc                                                                                                                >  1:1694710/1‑150 (MQ=255)                                          gCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCAt                                                                                                              >  1:648704/1‑150 (MQ=255)                                           cTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATc                                                                                                             <  2:306261/150‑1 (MQ=255)                                           cTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATc                                                                                                             >  1:1850143/1‑150 (MQ=255)                                                 tgctTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGAAGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATcc                                                                                                       >  1:1389353/1‑150 (MQ=255)                                                   ctTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCGTCGCATcccc                                                                                                     >  1:1011315/1‑150 (MQ=255)                                                    ttGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGTGCGAGGCCCG‑‑‑‑‑TGCCGGCGTGAGGCTCTTTCCATGCACGGATGACCATCGCATCCCCa                                                                                                    >  2:98461/1‑150 (MQ=255)                                                    ttGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCa                                                                                                    >  1:220793/1‑150 (MQ=255)                                                        aaTGGGTAGGCATACCCAGTGGTTTTTTTTTTTTTTTTCGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGt                                                                                                >  2:972187/1‑150 (MQ=255)                                                          tGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGa                                                                                              >  1:1660240/1‑150 (MQ=255)                                                           gggTAGGCATACTCCGTGGGTTTTCGTCATGAGGACGACGGCACCTGGTCGTCGGACCGGCGTTTTTCTGGTGCTTATACTGGCGGGCCAGGCCCG‑‑‑‑‑TGCCAGCGAGCGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCACCACCGTGaa                                                                                             <  2:706529/150‑1 (MQ=255)                                                              tAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACtt                                                                                          >  1:429599/1‑150 (MQ=255)                                                                ggCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGc                                                                                        <  2:486619/150‑1 (MQ=255)                                                                 gCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCa                                                                                       <  2:1184495/150‑1 (MQ=255)                                                                 gCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCa                                                                                       >  2:1071389/1‑150 (MQ=255)                                                                 gCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCa                                                                                       >  1:1184495/1‑150 (MQ=255)                                                                 gCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCa                                                                                       <  1:1071389/150‑1 (MQ=255)                                                                  cATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAg                                                                                      <  1:1688413/150‑1 (MQ=255)                                                                    tACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGACAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAggg                                                                                    >  1:327887/1‑150 (MQ=255)                                                                     aCCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGa                                                                                   <  1:1389679/150‑1 (MQ=255)                                                                     aCCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGGTGTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGa                                                                                   >  2:519385/1‑150 (MQ=255)                                                                      cccAGTGGTTTTTCGTCATGAGTACGAAGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAg                                                                                  <  2:1389353/150‑1 (MQ=255)                                                                       ccAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAgccaggc                                                                                                                                                           <  1:281167/81‑1 (MQ=255)                                                                       ccAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAgccaggc                                                                                                                                                           >  2:281167/1‑81 (MQ=255)                                                                       ccAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGaa                                                                                             >  2:280353/1‑138 (MQ=255)                                                                       ccAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGaa                                                                                             <  1:280353/138‑1 (MQ=255)                                                                       ccAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAga                                                                                 >  2:1645130/1‑149 (MQ=255)                                                                       ccAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGt                                                                                 >  1:689878/1‑150 (MQ=255)                                                                           tGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTtata                                                                             <  1:1134949/150‑1 (MQ=255)                                                                            ggTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATaa                                                                            <  1:278782/150‑1 (MQ=255)                                                                               ttttCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGa                                                                         <  2:429599/150‑1 (MQ=255)                                                                                tttCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGAc                                                                        <  1:1426690/150‑1 (MQ=255)                                                                                    gTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGa                                                                    <  2:1694710/150‑1 (MQ=255)                                                                                     tCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGaa                                                                   >  2:767147/1‑150 (MQ=255)                                                                                       aTGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACg                                                                 >  1:293230/1‑150 (MQ=255)                                                                                         gAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGca                                                               <  2:1908176/150‑1 (MQ=255)                                                                                              gttcatgtccttataactccctgcaagttcacggtggggatgcgatggccaaccctGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAgg                                                                                                                       >  1:1681240‑M1/57‑89 (MQ=255)                                                                                              gttcatgtccttataactccctgcaagttcacggtggggatgcgatggccaaccctGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAgg                                                                                                                       <  2:1681240‑M1/33‑1 (MQ=255)                                                                                               gacgGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATaa                                                                            >  2:520540/1‑131 (MQ=255)                                                                                               gacgGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATaa                                                                            <  1:520540/131‑1 (MQ=255)                                                                                                acgGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCTGGCTGC‑‑‑‑‑AACGTTCTCAATGCGTTTCACTGGCAGGGTTGTCCATCGCATCCCCACCGTGAACTTGCAGTGAGTTATAAGGACATGAACGCAGCcagca                                                        <  1:896372/150‑1 (MQ=255)                                                                                                    cACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCAt                                                                                                              <  2:547427/92‑1 (MQ=255)                                                                                                    cACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCAt                                                                                                              >  1:547427/1‑92 (MQ=255)                                                                                                       cTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAg                                                 >  1:1378893/1‑150 (MQ=255)                                                                                                         ggTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGcc                                               <  1:1716469/150‑1 (MQ=255)                                                                                                          gtcgtcTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCa                                              >  1:1508636/1‑150 (MQ=255)                                                                                                              tcTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATc                                                                                                             >  1:1870862/1‑83 (MQ=255)                                                                                                              tcTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATc                                                                                                             <  2:1870862/83‑1 (MQ=255)                                                                                                              tcTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCa                                                  >  1:867235/1‑142 (MQ=255)                                                                                                              tcTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCa                                                  <  2:867235/142‑1 (MQ=255)                                                                                                              tcTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAAtt                                          <  2:648704/150‑1 (MQ=255)                                                                                                                    ctgCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGGAAATCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGc                                    <  1:117287/148‑1 (MQ=255)                                                                                                                    cGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGCGCTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGc                                    >  2:697761/1‑150 (MQ=255)                                                                                                                      gCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTCCCCTGGCAGGGTTGGCCATCGCACCCCCGCCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCt                                  <  2:1620823/150‑1 (MQ=255)                                                                                                                       cGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGCTACAAGGACATCAACGCAGCCAGCAGTATCAGCCAAATTGCCAGccag                                 >  2:117287/1‑148 (MQ=255)                                                                                                                         tttttCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCa                                                                                       <  2:1816206/94‑1 (MQ=255)                                                                                                                         tttttCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCa                                                                                       >  1:1816206/1‑94 (MQ=255)                                                                                                                         tttttCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGAt                               >  2:829420/1‑150 (MQ=255)                                                                                                                         tttttCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGCTATAAAGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGAt                               >  2:313438/1‑150 (MQ=255)                                                                                                                         tttttCGGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGATTGCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGAt                               <  1:100594/150‑1 (MQ=255)                                                                                                                           tttCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATgg                             <  1:829420/150‑1 (MQ=255)                                                                                                                            ttCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGc                            <  1:1639368/150‑1 (MQ=255)                                                                                                                               tGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGTATGGATCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGa                         <  1:98461/150‑1 (MQ=255)                                                                                                                                  ggCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGcc                                   <  2:1130686/137‑1 (MQ=255)                                                                                                                                  ggCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGcc                                   >  1:1130686/1‑137 (MQ=255)                                                                                                                                   gCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGa                                                                                   <  1:1461666/88‑1 (MQ=255)                                                                                                                                   gCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGAcccc                     >  1:374160/1‑150 (MQ=255)                                                                                                                                   gCTGATACTGGCGAGCCAGTCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGa                                                                                   >  2:1461666/1‑88 (MQ=255)                                                                                                                                    cTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCCTCCCCACCGTGAACTTGCAGGTGGTTATAAGGACATGAAAGCAGCCAGCAGTATCAGCCAAATTGCCAGCCGGATCGCCGACACCa                    >  1:762680/1‑150 (MQ=255)                                                                                                                                    cTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCa                    <  1:15263/150‑1 (MQ=255)                                                                                                                                                 gccaggccag‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCAt       <  2:293230/150‑1 (MQ=255)                                                                                                                                                 gccaggccag‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCAt       >  1:240489/1‑150 (MQ=255)                                                                                                                                                    aggccag‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGAGCCCAAGCGAAGTGCCAtgtt    <  2:1508636/150‑1 (MQ=255)                                                                                                                                                      GCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCAtgttgt  >  2:374160‑M1/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                           CGGTGCCTTGTTTGACTTGGTTCCGGGGCGTTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTTGT  >  NC_002947/688729‑689027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.