New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 688878 =83 (1.110)5 (0.070) 4/244 NT 5.8% intergenic (+371/‑80) PP_5446/PP_0590 hypothetical protein/ArsR family transcriptional regulator
?NC_002947 688908 = 83 (1.160)intergenic (+401/‑50) PP_5446/PP_0590 hypothetical protein/ArsR family transcriptional regulator

Only 100 of 103 total aligned reads displayed.

TTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTTGTGGGCATTGATCGATGGCACACCACG  >  NC_002947/688759‑689052
                                                                                                                                                          |                                                                                                                                                
ttttCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCa                                                                                                                                                  >  2:896372/1‑150 (MQ=255)
ttttCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCa                                                                                                                                                  <  1:242919/150‑1 (MQ=255)
     gacgCCGCTCCGCTGCTTGCAATGGGTAGGCATACCCAATAGATTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGACGGTATTCTGCGGCTTAAACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGCGGCTTTTCCCTGGCAGGttt                                                                                                                                             >  2:752913/4‑150 (MQ=255)
     gAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGtt                                                                                                                                             >  1:1847402/1‑150 (MQ=255)
      ggcactgcgcttggggtcggccatcaggctggcaatttggctgatactgctggctgcgttcatgtccttataactccctgcaagttcacggtggggatgcgatggccaaccctGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAg                                                                                                                                                 >  2:195389‑M1/114‑150 (MQ=255)
      ggcactgcgcttggggtcggccatcaggctggcaatttggctgatactgctggctgcgttcatgtccttataactccctgcaagttcacggtggggatgcgatggccaaccctGCCAGGCCAGTGCCAGCGAGAGGCGCTTCCCTGGCAg                                                                                                                                                 >  2:460773‑M1/114‑150 (MQ=255)
      ggcactgcgcttggggtcggccatcaggctggcaatttggctgatactgctggctgcgttcatgtccttataactccctgcaagttcacggtggggatgcgatggccaaccctGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTg                                                                                                                                            >  1:1218131‑M1/114‑150 (MQ=255)
         ccGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGcc                                                                                                                                         >  1:1694710/1‑150 (MQ=255)
           gCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCAt                                                                                                                                       >  1:648704/1‑150 (MQ=255)
            cTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATc                                                                                                                                      >  1:1850143/1‑150 (MQ=255)
            cTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATc                                                                                                                                      <  2:306261/150‑1 (MQ=255)
                  tgctTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGAAGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATcc                                                                                                                                >  1:1389353/1‑150 (MQ=255)
                    ctTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCGTCGCATcccc                                                                                                                              >  1:1011315/1‑150 (MQ=255)
                     ttGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCa                                                                                                                             >  1:220793/1‑150 (MQ=255)
                         aaTGGGTAGGCATACCCAGTGGTTTTTTTTTTTTTTTTCGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGt                                                                                                                         >  2:972187/1‑150 (MQ=255)
                           tGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGa                                                                                                                       >  1:1660240/1‑150 (MQ=255)
                            gggTAGGCATACTCCGTGGGTTTTCGTCATGAGGACGACGGCACCTGGTCGTCGGACCGGCGTTTTTCTGGTGCTTATACTGGCGGGCCAGGCCCG‑‑‑‑‑TGCCAGCGAGCGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCACCACCGTGaa                                                                                                                      <  2:706529/150‑1 (MQ=255)
                               tAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACtt                                                                                                                   >  1:429599/1‑150 (MQ=255)
                                 ggCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGc                                                                                                                 <  2:486619/150‑1 (MQ=255)
                                  gCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCa                                                                                                                <  1:1071389/150‑1 (MQ=255)
                                  gCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCa                                                                                                                >  2:1071389/1‑150 (MQ=255)
                                  gCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCa                                                                                                                <  2:1184495/150‑1 (MQ=255)
                                  gCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCa                                                                                                                >  1:1184495/1‑150 (MQ=255)
                                   cATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAg                                                                                                               <  1:1688413/150‑1 (MQ=255)
                                     tACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGACAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAggg                                                                                                             >  1:327887/1‑150 (MQ=255)
                                      aCCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGa                                                                                                            <  1:1389679/150‑1 (MQ=255)
                                      aCCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGGTGTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGa                                                                                                            >  2:519385/1‑150 (MQ=255)
                                       cccAGTGGTTTTTCGTCATGAGTACGAAGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAg                                                                                                           <  2:1389353/150‑1 (MQ=255)
                                        ccAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGaa                                                                                                                      >  2:280353/1‑138 (MQ=255)
                                        ccAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGaa                                                                                                                      <  1:280353/138‑1 (MQ=255)
                                        ccAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAga                                                                                                          >  2:1645130/1‑149 (MQ=255)
                                        ccAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGt                                                                                                          >  1:689878/1‑150 (MQ=255)
                                            tGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTtata                                                                                                      <  1:1134949/150‑1 (MQ=255)
                                             ggTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATaa                                                                                                     <  1:278782/150‑1 (MQ=255)
                                                ttttCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGa                                                                                                  <  2:429599/150‑1 (MQ=255)
                                                 tttCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGAc                                                                                                 <  1:1426690/150‑1 (MQ=255)
                                                     gTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGa                                                                                             <  2:1694710/150‑1 (MQ=255)
                                                      tCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGaa                                                                                            >  2:767147/1‑150 (MQ=255)
                                                        aTGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACg                                                                                          >  1:293230/1‑150 (MQ=255)
                                                          gAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGca                                                                                        <  2:1908176/150‑1 (MQ=255)
                                                               gttcatgtccttataactccctgcaagttcacggtggggatgcgatggccaaccctGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAgg                                                                                                                                                >  1:1681240‑M1/57‑89 (MQ=255)
                                                               gttcatgtccttataactccctgcaagttcacggtggggatgcgatggccaaccctGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAgg                                                                                                                                                <  2:1681240‑M1/33‑1 (MQ=255)
                                                                gacgGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATaa                                                                                                     >  2:520540/1‑131 (MQ=255)
                                                                gacgGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATaa                                                                                                     <  1:520540/131‑1 (MQ=255)
                                                                 acgGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCTGGCTGC‑‑‑‑‑AACGTTCTCAATGCGTTTCACTGGCAGGGTTGTCCATCGCATCCCCACCGTGAACTTGCAGTGAGTTATAAGGACATGAACGCAGCcagca                                                                                 <  1:896372/150‑1 (MQ=255)
                                                                     cACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCAt                                                                                                                                       >  1:547427/1‑92 (MQ=255)
                                                                     cACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCAt                                                                                                                                       <  2:547427/92‑1 (MQ=255)
                                                                        cTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAg                                                                          >  1:1378893/1‑150 (MQ=255)
                                                                          ggTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGcc                                                                        <  1:1716469/150‑1 (MQ=255)
                                                                           gtcgtcTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCa                                                                       >  1:1508636/1‑150 (MQ=255)
                                                                               tcTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATc                                                                                                                                      <  2:1870862/83‑1 (MQ=255)
                                                                               tcTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATc                                                                                                                                      >  1:1870862/1‑83 (MQ=255)
                                                                               tcTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCa                                                                           <  2:867235/142‑1 (MQ=255)
                                                                               tcTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCa                                                                           >  1:867235/1‑142 (MQ=255)
                                                                               tcTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAAtt                                                                   <  2:648704/150‑1 (MQ=255)
                                                                                     ctgCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGGAAATCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGc                                                             <  1:117287/148‑1 (MQ=255)
                                                                                     cGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGCGCTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGc                                                             >  2:697761/1‑150 (MQ=255)
                                                                                       gCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTCCCCTGGCAGGGTTGGCCATCGCACCCCCGCCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCt                                                           <  2:1620823/150‑1 (MQ=255)
                                                                                        cGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGCTACAAGGACATCAACGCAGCCAGCAGTATCAGCCAAATTGCCAGccag                                                          >  2:117287/1‑148 (MQ=255)
                                                                                          tttttCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCa                                                                                                                <  2:1816206/94‑1 (MQ=255)
                                                                                          tttttCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCa                                                                                                                >  1:1816206/1‑94 (MQ=255)
                                                                                          tttttCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGAt                                                        >  2:829420/1‑150 (MQ=255)
                                                                                          tttttCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGCTATAAAGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGAt                                                        >  2:313438/1‑150 (MQ=255)
                                                                                          tttttCGGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGATTGCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGAt                                                        <  1:100594/150‑1 (MQ=255)
                                                                                            tttCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATgg                                                      <  1:829420/150‑1 (MQ=255)
                                                                                             ttCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGc                                                     <  1:1639368/150‑1 (MQ=255)
                                                                                                tGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGTATGGATCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGa                                                  <  1:98461/150‑1 (MQ=255)
                                                                                                   ggCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGcc                                                            >  1:1130686/1‑137 (MQ=255)
                                                                                                   ggCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGcc                                                            <  2:1130686/137‑1 (MQ=255)
                                                                                                    gCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGa                                                                                                            <  1:1461666/88‑1 (MQ=255)
                                                                                                    gCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGAcccc                                              >  1:374160/1‑150 (MQ=255)
                                                                                                    gCTGATACTGGCGAGCCAGTCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGa                                                                                                            >  2:1461666/1‑88 (MQ=255)
                                                                                                     cTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCCTCCCCACCGTGAACTTGCAGGTGGTTATAAGGACATGAAAGCAGCCAGCAGTATCAGCCAAATTGCCAGCCGGATCGCCGACACCa                                             >  1:762680/1‑150 (MQ=255)
                                                                                                     cTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCa                                             <  1:15263/150‑1 (MQ=255)
                                                                                                                  gccaggccag‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCAt                                <  2:293230/150‑1 (MQ=255)
                                                                                                                     ctgccagggaagcgcctctcgctggcactggcctggcAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGcc                                  >  2:195389‑M2/38‑150 (MQ=255)
                                                                                                                     ctgccagggaagcgcctctcgctggcactggcctggcAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGcc                                  >  2:460773‑M2/38‑150 (MQ=255)
                                                                                                                     caaccctgccagggaagcgcctctcgctggcactggcAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGcc                                  >  1:1218131‑M2/38‑150 (MQ=255)
                                                                                                                     aggccag‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGAGCCCAAGCGAAGTGCCAtgtt                             <  2:1508636/150‑1 (MQ=255)
                                                                                                                       GCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCAtgttgt                           >  2:374160‑M1/1‑150 (MQ=255)
                                                                                                                        CCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTtgtg                          >  2:1847402‑M1/1‑150 (MQ=255)
                                                                                                                         cctgccagggaagcgcctctcgctggcactggcAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAAc                                                                                           >  1:1681240‑M2/34‑89 (MQ=255)
                                                                                                                         cctgccagggaagcgcctctcgctggcactggcAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAAc                                                                                           <  2:1681240‑M2/56‑1 (MQ=255)
                                                                                                                         CAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTTGTgg                         >  1:767147‑M1/1‑150 (MQ=255)
                                                                                                                                  gCCAGCGAGAGGCGCGTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACTTTGCCAGCAGTAGCAGCCAAATTGCCAGGCTGATGGCCGACCCCAAGGGCAGTGCCATGTTGTGGGCAt                     <  1:752913/150‑1 (MQ=255)
                                                                                                                                    cAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCa                                                                           >  2:178158/1‑94 (MQ=255)
                                                                                                                                    cAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCa                                                                           <  1:178158/94‑1 (MQ=255)
                                                                                                                                    cAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTTGTGGGCATTg                   >  2:910377/1‑150 (MQ=255)
                                                                                                                                     aGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTTGTGGGCATTGa                  >  2:1772581/1‑150 (MQ=255)
                                                                                                                                      gCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTTGTGGGCATTGAt                 >  2:617768/1‑150 (MQ=255)
                                                                                                                                      gCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTTGTGGGCATTGAt                 >  1:1003263/1‑150 (MQ=255)
                                                                                                                                          gagGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAACTTGCCAGGCTGATGGGCGACCCCAAGCGCAGTGCCATGTTGTGGGTTTTGATCGAt             <  2:1214142/150‑1 (MQ=255)
                                                                                                                                               gcTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTTGTgg                         >  1:1595891/1‑133 (MQ=255)
                                                                                                                                               gcTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTTGTgg                         <  2:1595891/133‑1 (MQ=255)
                                                                                                                                               gcTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATCCCCCCCCCCAAGGGCAGTGCCATGTTGTGGGCATTGATCGATGGcac        >  1:1543782/1‑150 (MQ=255)
                                                                                                                                                cTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTTGTGGGCATTGATCGAt             <  1:1541620/144‑1 (MQ=255)
                                                                                                                                                cTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTTGTGGGCATTGATCGAt             >  2:1541620/1‑144 (MQ=255)
                                                                                                                                                     ctggcAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTTGTGGGCATTGATCGATgg           >  2:1346015‑M2/6‑141 (MQ=255)
                                                                                                                                                     ctggcAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTTGTGGGCATTGATCGATgg           <  1:1346015‑M2/136‑1 (MQ=255)
                                                                                                                                                     ctggcAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTTGTGGGCATTGATCGATGGCACACCACg  >  2:826705‑M2/6‑150 (MQ=255)
                                                                                                                                                          |                                                                                                                                                
TTTTCGAAGCCGCTTCGCTGCTTGCAATGGGTAGGCATACCCAGTGGTTTTTCGTCATGAGTACGACGGCACCTGGTCGTCTGACCGGCGTTTTTCTGCGGCTTATACTGGCGAGCCAGGCCAG‑‑‑‑‑TGCCAGCGAGAGGCGCTTCCCTGGCAGGGTTGGCCATCGCATCCCCACCGTGAACTTGCAGGGAGTTATAAGGACATGAACGCAGCCAGCAGTATCAGCCAAATTGCCAGCCTGATGGCCGACCCCAAGCGCAGTGCCATGTTGTGGGCATTGATCGATGGCACACCACG  >  NC_002947/688759‑689052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.