New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 898173	57 (0.760)	7 (0.100)	6/238	NT	9.8%	coding (54/336 nt)	PP_0781	hypothetical protein
	?	NC_002947	= 4798980	75 (1.070)					coding (33/486 nt)	PP_4226	hypothetical protein

TTCGCCGAGCATGCCGGAAACGAAGTCGCATTTTCCTACAACTGACTCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGCTGTGCGCTCAGCCTTCTACCAGGCTGAATGGCAGACGGC  >  NC_002947/898026‑898322                                                                                                                                                    |                                                                                                                                                      ttCGCCGAGCATGCCGGAAACGAAGTCGCATTTTCCTACAACTGACTCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGAt                                                                                                                                                     >  2:809463/1‑150 (MQ=255) ttCGCCGAGCATGCCGGAAACGAAGTCGCATTTTCCTACAACTGACTCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGAt                                                                                                                                                     >  1:1461143/1‑150 (MQ=255)    gCCGAGCATGCCGGAAACGAAGTCGCATTTTCCTACAACTGACTCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGa                                                                                                                                                  <  2:269942/150‑1 (MQ=255)    gCCGAGCATGCCGGAAACGAAGTCGCATTTTCCTACAACTGACTCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGa                                                                                                                                                  <  1:1824744/150‑1 (MQ=255)    gCCGAGCATGCCGGAAACGAAGTCGCATTTTCCTACAACTGACTCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGa                                                                                                                                                  >  1:1759139/1‑150 (MQ=255)     ccGAGCATGCCGGAAACGAAGTCGCATTTTCCTACAACTGACTCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAg                                                                                                                                                 <  1:1458686/150‑1 (MQ=255)      cGAGCATGCCGGAAACGAAGTCGCATTTTCCTACAACTGACTCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGATATCGAGt                                                                                                                                                <  2:1553438/150‑1 (MQ=255)       gAGCATGCCGGAAACGAAGTCGCATTTTCCTACAACTGACTCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTc                                                                                                                                               <  2:323462/150‑1 (MQ=255)         gCATGGCGGAAACGAAGTCGCATTTTCCTACAGCTGAGTCAGAAAGCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCGGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCAc                                                                                                                                             <  2:236841/150‑1 (MQ=14)                ggAAACGAAGTCGCATTTTCCTACAACTGACTCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCAt                                                                                                                                      <  2:1794592/150‑1 (MQ=39)                           cGCATTTTCCTACAACTGACTCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCAtggtgg                                                                                                                           >  2:1663452/1‑150 (MQ=39)                              aTTTTCCTACAACTGACTCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCt                                                                                                                        <  2:1759139/150‑1 (MQ=39)                                    cTACAACTGACTCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGCTGACAGTTAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCaa                                                                                                                  >  2:459195/1‑150 (MQ=255)                                     tACAACTGACTCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAg                                                                                                                 <  1:1701552/150‑1 (MQ=40)                                               tCAGAAACCTCCGATCCGAATCCATGATTGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCAt                                                                                                                                >  1:1419347/1‑125 (MQ=21)                                               tCAGAAACCTCCGATCCGAATCCATGATTGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCAt                                                                                                                                <  2:1419347/125‑1 (MQ=21)                                               tCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAg                                                                                                       >  1:412460/1‑150 (MQ=37)                                               tCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAg                                                                                                       >  2:1270009/1‑150 (MQ=35)                                               tCAGAAACCTCAGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAg                                                                                                       >  2:1609072/1‑150 (MQ=18)                                                 aGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGtt                                                                                                     >  2:325258/1‑150 (MQ=35)                                                   aaaCCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTcc                                                                                                   >  2:571062/1‑150 (MQ=35)                                                        tccgatccgaATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATc                                                                                                                                     <  1:1900318/111‑1 (MQ=32)                                                        tccgatccgaATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATc                                                                                                                                     >  2:1900318/1‑111 (MQ=32)                                                         ccgatccgaATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCa                                                                                             <  1:325258/150‑1 (MQ=35)                                                                gaATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCaa                                                                                      <  1:809463/150‑1 (MQ=35)                                                                    ccATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATgaa                                                                                  <  1:1609072/150‑1 (MQ=35)                                                                     cATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATgaag                                                                                 >  1:751785/1‑150 (MQ=35)                                                                      atgatgGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATgaaga                                                                                >  1:586717/1‑150 (MQ=35)                                                                          tgGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAg                                                                                                                 >  2:1329460/1‑113 (MQ=33)                                                                          tgGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAg                                                                                                                 <  1:1329460/113‑1 (MQ=32)                                                                          cctcaTTTGCCCCTGCGCACGTTGTCAGGGAGGCACCTCATGTACCTGGCTTACCTCGTGCCCTCCTGGCACGAGAGCGAGTCACCTGTCATCGCCATGGTGGGCTACCCACGCGGTGGCCAGTCCCGCACCAGCCTCAATGAAGAAGTc                                                                            <  2:686834/146‑1 (MQ=11)                                                                           gggATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCg                                                                           >  2:352726/1‑150 (MQ=38)                                                                             gATTTCCCCCTGCACACGTTGTAAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCGGCCTCAATGAAGAAGTCGcc                                                                         >  1:1780642/1‑150 (MQ=255)                                                                             gATTTCCCCCTGCACACGTGGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCGGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTGCCGCACCAGCCTCAAAGAAGAAGTCGcc                                                                         >  2:1058543/1‑150 (MQ=255)                                                                                     ccTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTggg                                                                 <  1:352726/150‑1 (MQ=255)                                                                                          acacGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCa                                                            >  2:246462/1‑150 (MQ=255)                                                                                          acacGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCa                                                            >  1:1922271/1‑150 (MQ=255)                                                                                            acGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGACGTCGCCTCGCTGGGCCTCAAc                                                          <  2:1461143/150‑1 (MQ=38)                                                                                              gTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCTTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCCCAACCt                                                        >  1:1097543/1‑150 (MQ=255)                                                                                                  tCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCATCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTgcgc                                                    >  2:603723/1‑150 (MQ=255)                                                                                                  tCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTgcgc                                                    <  1:246462/150‑1 (MQ=255)                                                                                                  tCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTgcgc                                                    >  2:390176/1‑150 (MQ=40)                                                                                                  tCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCCCACAAGCCTAAAAGAATAACGCGCCCCGCGGGGCCTCAACCTgcgc                                                    >  2:1153662/1‑150 (MQ=11)                                                                                                    aGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCg                                                  >  2:1884204/1‑150 (MQ=255)                                                                                                    aGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCAAACCGATTGTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCg                                                  >  2:1004614/1‑150 (MQ=14)                                                                                                       gagaCACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCATCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGAt                                               <  1:603723/150‑1 (MQ=255)                                                                                                            acCTCATGTACCTGGATTACCTCGTGCCCTCCTGTCACGAGgtaatccaggtacattaggtgtctccctgacaacgtgtgcagggggaaatcccatcatgaattcggatcagaggtttctgggttggctgtaggcaaatgcgacttcgtt                                          >  2:1840197‑M1/1‑41 (MQ=255)                                                                                                             ccTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCTACGc                                         >  2:181095/1‑150 (MQ=255)                                                                                                             ccTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTACGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGc                                         >  1:961511/1‑150 (MQ=255)                                                                                                              cTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGCt                                        >  2:451948/1‑150 (MQ=255)                                                                                                                  tGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGCTGTgc                                    <  1:571062/150‑1 (MQ=255)                                                                                                                   gTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGCTGTgcg                                   >  1:1845134/1‑150 (MQ=255)                                                                                                                        tGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGCTGTGCGCTCAg                              <  1:1884204/150‑1 (MQ=255)                                                                                                                          gATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGCTGTGCGCTCAGcc                            <  2:751785/150‑1 (MQ=255)                                                                                                                            ttACCTCGTGCCCTCCTGGCACGAGgtaatccaggtacatgaggtgtctccctgacaacgtgtgcagggggaaatcccat                                                                                                <  1:1781301‑M1/80‑56 (MQ=255)                                                                                                                            ttACCTCGTGCCCTCCTGGCACGAGgtaatccaggtacatgaggtgtctccctgacaacgtgtgcagggggaaatcccat                                                                                                >  2:1781301‑M1/1‑25 (MQ=255)                                                                                                                                cTCGTGCCCTCCTGGCACGAGgtaatccaggtacatgaggtgtctccctgacaacgtgtgcagggggaaatcccatcatggattcggatcagaggtttctgggtcggttgtaggaaaatgcgacttcgtttctgtt                                    <  1:1759443‑M1/136‑116 (MQ=255)                                                                                                                                cTCGTGCCCTCCTGGCACGAGgtaatccaggtacatgaggtgtctccctgacaacgtgtgcagggggaaatcccatcatggattcggatcagaggtttctgggtcggttgtaggaaaatgcgacttcgtttctgtt                                    >  2:1759443‑M1/1‑21 (MQ=255)                                                                                                                                cTCGTGCCCTCCTGGCACGAGgtaatccaggtacatgaggtgtctccctgacaacgtgtgcagggggaaatcccatcatggattcggatcagaggtttctgg                                                                      >  2:575390‑M1/1‑21 (MQ=255)                                                                                                                                cTCGTGCCCTCCTGGCACGAGgtaatccaggtacatgaggtgtctccctgacaacgtgtgcagggggaaatcccatcatggattcggatcagaggtttctgg                                                                      <  1:575390‑M1/102‑82 (MQ=255)                                                                                                                                cTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGCTGTGCGCTCAGCCTTCt                        <  2:1288267/148‑1 (MQ=255)                                                                                                                                cTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGCTGTGCGCTCAGCCTTCt                        >  1:1288267/1‑148 (MQ=255)                                                                                                                                   gTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGCTGTGCGCTCAGCCTTCTACCAg                   >  1:413020/1‑150 (MQ=255)                                                                                                                                    tGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTTATCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGCTGTGCGCTCAGCCTTCTACCAgg                  <  1:1058543/150‑1 (MQ=255)                                                                                                                                    cgCCCGCCGGGCACGAGATCCGGTCACGTGTCATCGCCATGGTGGGTTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGACGCAGTCGCCTCGCTGGGCCTCACCCTGCGCCGGATCGACTCTTCGCGCTCAGCCTTCTACCTgg                  <  2:939578/149‑1 (MQ=14)                                                                                                                                        ctcctGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGCTGTGCGCTCAGCCTTCTACCAGGCTGa              >  1:642377/1‑150 (MQ=255)                                                                                                                                          gagggCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGCTGTGCGCTCAGCCTTCTACCAGGCTGAAt            <  1:74497/147‑1 (MQ=255)                                                                                                                                           ctGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGCTGTGCGCTCAGCCTTCTACCAGGCTGAATg           >  1:137144/1‑150 (MQ=255)                                                                                                                                             ggCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGCTGTGCGCTCAGCCTTCTACCAGGCTGAATGGc         <  1:1270009/150‑1 (MQ=255)                                                                                                                                              gaaCGAGATCCAGTCACGAGTCATCGCCATGGTGGGCTACCCAAAAAGAGTGTAAATATTTACTGATTTCATTGACGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGCTGTGCGCTCAGCCTTCTACCAGGCTGAATGGCa        <  1:1663452/148‑1 (MQ=9)                                                                                                                                              gCACGAGgtaatccaggtacatgaggtgtctccctgacaacgtgtgcagggggaaatcccatcatggattcggatcagaggtttctgggtcggttgtaggaaaatgcgacttcgtttctgctgtgttcgagaagctcgggaattggggtt        <  2:35301‑M1/150‑144 (MQ=255)                                                                                                                                               cACGAGgtaatccaggtacatgaggtgtctccctgacaacgtgtgcagggggaaatcccatcatggattcggatcagaggtttctgggtcggttgtaggaaaatgcgacttcgtttctgttgtgttcgagaagctcgggaattggggttg       >  2:250230‑M1/1‑6 (MQ=255)                                                                                                                                                aCGAGgtaatccaggtacatgaggtgtctccctgagaacgtgtgcagggggaaatcccatcatggattcggatcagaggtttctgggtcggttgtaggaaaatgcgacttcgtttctgtagtgttcgagaagctcgggaattggggttga      >  2:1019002‑M1/1‑5 (MQ=255)                                                                                                                                                aCGAGgtaatccaggtacatgaggtgtctccctgacaacgtgtgcagggggaaatcccatcatggattcggatcagaggtttctgggtcggttgtaggaaaatgcgacttcgtttctgttgtgttcgagaagctcgggaattggggttga      <  1:1509900‑M1/150‑146 (MQ=255)                                                                                                                                                aCGAGgtaatccaggtacatgaggtgtctccctgacaacgtgtgcagggggaaatcccatcatggattcggatcagaggtttctgggtcggttgtaggaaaatgcgacttcgtttctgttgtgttcgagaagctcgggaattggggttga      <  1:642332‑M1/150‑146 (MQ=255)                                                                                                                                                  taggtagtccagggacatgtggggtcgccctgacaacgtgtgcagggggaaatcccatcatggattcggatcagaggtttctgggtcggttgtaggaaaatgcgacttcgtttctgttgtgttcgagaagctcgggaattggggttgagg    <  2:869788‑M1/149‑148 (MQ=255)                                                                                                                                                  gAGgtaatccaggtacatgaggtgtctccctgacaacgtgtgcagggggaaatcccatcatggattcggatcagaggtttctgggtcggttgtaggaaaatgcgacttcgtttctgttgtgttcgagaagctcgggaattggggttgagg    >  1:371016‑M1/1‑3 (MQ=255)                                                                                                                                                    ggtaatccaggtacatgaggtgtctccctgacaacgtgtgcagggggaaatcccatcatggattcggatcagaggtttctgggtcggttgtaggaaaatgcgacttcgtttctgttgtgttcgagaagctcgggaattggggttgaggct  >  1:288330‑M1/1‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      TTCGCCGAGCATGCCGGAAACGAAGTCGCATTTTCCTACAACTGACTCAGAAACCTCCGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCCAAGCGGTGGCCAGTTCCGCACCAGCCTCAATGAAGAAGTCGCCTCGCTGGGCCTCAACCTGCGCCGGATCGACGCTGTGCGCTCAGCCTTCTACCAGGCTGAATGGCAGACGGC  >  NC_002947/898026‑898322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.