New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 89817357 (0.760)7 (0.100) 6/238 NT 9.8% coding (54/336 nt) PP_0781 hypothetical protein
?NC_002947 = 4798980 75 (1.070)coding (33/486 nt) PP_4226 hypothetical protein

AGCCTCAACCCCAATTCCCGAGCTTCTCGAACACAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAACCTGCGCCGGATCGAAGCTGTCCGCACAGCCTTCTA  >  NC_002947/4798832‑4799129
                                                                                                                                                    |                                                                                                                                                     
aGCCTCAACCCCAATTCCCGAGCTTCTCGAACACAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACc                                                                                                                                                      >  1:288330‑M2/1‑149 (MQ=255)
  ccTCAACCCCAATTCCCGAGCTTCTCGAACACAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGCGACCCCACATGTCCCTGGACTACcta                                                                                                                                                    <  2:869788‑M2/150‑4 (MQ=255)
  ccTCAACCCCAATTCCCGAGCTTCTCGAACACAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACctc                                                                                                                                                    >  1:371016‑M2/1‑147 (MQ=255)
    tCAACCCCAATTCCCGAGCTTCTCGAACACTACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTCTCAGGGAGACACCTCATGTACCTGGATTACctcgt                                                                                                                                                  >  2:1019002‑M2/1‑145 (MQ=255)
    tCAACCCCAATTCCCGAGCTTCTCGAACACAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACctcgt                                                                                                                                                  <  1:642332‑M2/150‑6 (MQ=255)
    tCAACCCCAATTCCCGAGCTTCTCGAACACAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACctcgt                                                                                                                                                  <  1:1509900‑M2/150‑6 (MQ=255)
     cAACCCCAATTCCCGAGCTTCTCGAACACAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACctcgtg                                                                                                                                                 >  2:250230‑M2/1‑144 (MQ=255)
      aaCCCCAATTCCCGAGCTTCTCGAACACAGCAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACctcgtgc                                                                                                                                                <  2:35301‑M2/150‑8 (MQ=255)
         cccAATTCCCGAGCTTCTCGAACACAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCcct                                                                                                                                             >  2:1575797/1‑150 (MQ=255)
           cAATTCCCGAGCTTCTCGAACACAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCcctcc                                                                                                                                           >  1:1135671/1‑150 (MQ=255)
                 ccGAGCTTCTCGAACACAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGCCGCATCTGATCCGAACTTAGTATTGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGacac                                                                                                                                     >  1:1671527/1‑150 (MQ=17)
                   gAGCTTCTCGAACACAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACga                                                                                                                                   <  2:1793130/150‑1 (MQ=255)
                      cTTCTCGAACACAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGAt                                                                                                                                <  2:1375755/150‑1 (MQ=255)
                         ctcGAACACGACAGAAACGAAGTCGCATTTTCCTACCACCGACCCAGAATCCTCTGATCCGAATCCATGATGGGATTTCCCGCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCCCGTGCCCTCCTGGCACGAGATCGa                                                                                                                             <  2:1720629/150‑1 (MQ=14)
                         ctcGAACACAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGa                                                                                                                             <  2:610335/150‑1 (MQ=255)
                          tcGAACACAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATCCCCCCCTGTACGCGGTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAg                                                                                                                            <  2:456771/150‑1 (MQ=17)
                            gAACACAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTc                                                                                                                          >  1:933904/1‑150 (MQ=255)
                              acacAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCAc                                                                                                                        <  2:1085054/150‑1 (MQ=255)
                                acaacaGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAg                                                                                                                            <  2:320967/144‑1 (MQ=255)
                                acaacaGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAg                                                                                                                            <  2:328239/144‑1 (MQ=255)
                                acaacaGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAg                                                                                                                            >  1:328239/1‑144 (MQ=255)
                                acaacaGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAg                                                                                                                            >  1:320967/1‑144 (MQ=255)
                                acaacaGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACgt                                                                                                                      <  2:1135671/150‑1 (MQ=255)
                                acaacaGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACgt                                                                                                                      >  2:648402/1‑150 (MQ=255)
                                  aacaGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACctcgtgccaggagggcacgag                                                                                                                                  <  1:1759443‑M2/136‑22 (MQ=255)
                                  aacaGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACctcgtgccaggagggcacgag                                                                                                                                  >  2:1759443‑M2/1‑115 (MQ=255)
                                  aacaGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTc                                                                                                                          <  1:1495859/144‑1 (MQ=255)
                                  aacaGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTc                                                                                                                          >  2:1495859/1‑144 (MQ=255)
                                  aacaGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACgtgt                                                                                                                    >  1:833150/1‑150 (MQ=40)
                                   acaGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTc                                                                                                                   >  1:556530/1‑150 (MQ=255)
                                     aGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACga                                                                                                                                   <  1:1431245/132‑1 (MQ=40)
                                     aGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACga                                                                                                                                   >  2:1431245/1‑132 (MQ=40)
                                      gAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATc                                                                                                                <  2:1509900/150‑1 (MQ=39)
                                        aaCGAAGTCGCATTTGCCTACAGCCAACCCAGAAACCTCTGATCCGAATTCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTAATGTACCTGGATTACctcgtgacaggagggcacgaggtaatccaggtacatgaggt                                                                                                              >  2:1840197‑M2/1‑109 (MQ=255)
                                               tCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCAtggtg                                                                                                       >  2:446662/1‑150 (MQ=39)
                                               ccGCATGTGCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCAtggtg                                                                                                       <  2:1833352/149‑1 (MQ=255)
                                                         cTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGGGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCaaa                                                                                             >  2:792185/1‑150 (MQ=255)
                                                          tACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAg                                                                                            >  1:1667843/1‑150 (MQ=255)
                                                            cAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCg                                                                                          >  1:1583575/1‑150 (MQ=255)
                                                              aCCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGt                                                                                        <  1:1575797/150‑1 (MQ=255)
                                                               ccGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTg                                                                                       <  2:1643448/150‑1 (MQ=39)
                                                                cGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTgg                                                                                      <  2:642332/150‑1 (MQ=40)
                                                                 gACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGc                                                                                     >  1:1702524/1‑150 (MQ=37)
                                                                   cccAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATc                                                                                                                >  1:732704/1‑121 (MQ=35)
                                                                   cccAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATc                                                                                                                <  2:732704/121‑1 (MQ=35)
                                                                    ccAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACctcgtgccaggagggcacgag                                                                                                                                  <  1:575390‑M2/102‑22 (MQ=255)
                                                                    ccAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACctcgtgccaggagggcacgag                                                                                                                                  >  2:575390‑M2/1‑81 (MQ=255)
                                                                         aaCCTCTGATCCGAATCCATGATGGGCTTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGCTGACGTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCg                                                                             <  1:422155/150‑1 (MQ=255)
                                                                         aaCCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCg                                                                             <  2:556530/150‑1 (MQ=35)
                                                                                 aTCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGcc                                                                     >  2:602316/1‑150 (MQ=35)
                                                                                     gAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCaa                                                                 <  2:1702524/150‑1 (MQ=35)
                                                                                         ccATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTgg                                                                                      >  2:162170/1‑125 (MQ=33)
                                                                                         ccATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTgg                                                                                      <  1:162170/125‑1 (MQ=33)
                                                                                            tgatgGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCGCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAagag                                                          >  1:831503/1‑150 (MQ=25)
                                                                                              atgGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACctcgtgccaggagggcacgaggtaa                                                                                                                              >  2:1781301‑M2/1‑55 (MQ=255)
                                                                                              atgGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACctcgtgccaggagggcacgaggtaa                                                                                                                              <  1:1781301‑M2/80‑26 (MQ=255)
                                                                                              atgGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGt                                                        <  1:187256/150‑1 (MQ=38)
                                                                                               tgGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGt                                                                                        <  2:1232898/117‑1 (MQ=33)
                                                                                               tgGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGt                                                                                        >  1:1232898/1‑117 (MQ=33)
                                                                                                 ggATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGc                                                     >  1:1024639/1‑150 (MQ=38)
                                                                                                 ggATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGc                                                     >  2:1719907/1‑150 (MQ=37)
                                                                                                         cccTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTgg                                             >  1:1248528/1‑150 (MQ=255)
                                                                                                          ccTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGc                                                     <  1:759568/141‑1 (MQ=39)
                                                                                                          ccTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGc                                                     >  2:759568/1‑141 (MQ=38)
                                                                                                          ccTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTggg                                            >  1:877595/1‑150 (MQ=255)
                                                                                                          ccTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGACACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTggg                                            >  1:1274553/1‑150 (MQ=255)
                                                                                                           cTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGc                                           >  1:295627/1‑150 (MQ=255)
                                                                                                           cTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGc                                           <  1:217420/150‑1 (MQ=255)
                                                                                                            tGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGcc                                          <  1:602316/150‑1 (MQ=255)
                                                                                                               acacGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCa                                                                                   <  2:153049/106‑1 (MQ=33)
                                                                                                               acacGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCa                                                                                   >  1:153049/1‑106 (MQ=33)
                                                                                                                 acGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAAc                                     <  2:235551/150‑1 (MQ=39)
                                                                                                                   gTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTgg                                                                                      >  2:1357785/1‑99 (MQ=34)
                                                                                                                   gTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTgg                                                                                      <  1:1357785/99‑1 (MQ=34)
                                                                                                                   gTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAACCt                                   >  1:1712233/1‑150 (MQ=255)
                                                                                                                       tCAGGGAGACACCTCATGTACCTGGATAGCGTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAACCTgcgc                               <  1:1434884/150‑1 (MQ=255)
                                                                                                                        cAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAACCTGCGcc                              <  1:446662/150‑1 (MQ=255)
                                                                                                                           ggAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAag                                                            >  1:15282/1‑117 (MQ=38)
                                                                                                                           ggAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAag                                                            <  2:15282/117‑1 (MQ=38)
                                                                                                                                cacCTCATGTACCTGGCTAAACTCGTGTGCGCCTAGCACCAGAGCGAGTCAAGTGTCACCGTCCCAGCGCCCGACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAACCTGCGCCGGATCGaa                      <  1:35301/150‑1 (MQ=9)
                                                                                                                                cacCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGATACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAACCTGCGCCGGATCGaa                      <  2:833150/150‑1 (MQ=255)
                                                                                                                                cacCTCATGGACCTGGGTTACCTCGTGCCCTCCTGGCACGAGATGGTGTCAGGTGTCAGTGCCGTGGTGGGCTACCAAAGCGGTGGCCAGTTCCTCACTAGCCTGAATGAAGAGGTCGCCTCACTGGGCCTCAACCTGGGCCGGAttgga                      <  2:831503/150‑5 (MQ=14)
                                                                                                                                  ccTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAACCTGCGCCGGATCGAAGc                    >  2:823519/1‑150 (MQ=255)
                                                                                                                                   cTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAaga                                                           <  1:636764/110‑1 (MQ=38)
                                                                                                                                   cTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAaga                                                           >  2:636764/1‑110 (MQ=38)
                                                                                                                                   cTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAACCTGCGCCGGATCGAAGCt                   >  1:492173/1‑150 (MQ=255)
                                                                                                                                     cATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAACCTGCGCCGGATCGAAGCTGt                 <  2:877595/150‑1 (MQ=255)
                                                                                                                                       tGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAACCTGCGCCGGATAGAAGCTGTcc               >  1:1836296/1‑150 (MQ=255)
                                                                                                                                         tACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAACCTGCGCCGGATCGAAGCt                   >  2:695871/1‑144 (MQ=255)
                                                                                                                                         tACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAACCTGCGCCGGATCGAAGCt                   <  1:695871/144‑1 (MQ=255)
                                                                                                                                          aCCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAACCTGCGCCGGATCGAAg                     >  1:1802734/1‑141 (MQ=255)
                                                                                                                                          aCCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAACCTGCGCCGGATCGAAg                     <  2:1802734/141‑1 (MQ=255)
                                                                                                                                                    ccTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCa                                                 >  2:1175516/1‑103 (MQ=255)
                                                                                                                                                    ccTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCa                                                 <  1:1175516/103‑1 (MQ=255)
                                                                                                                                                    ccTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAACCTGCGCCGGATCGAAGCTGTCCGCACAGCCTTCTa  >  1:1583080/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
AGCCTCAACCCCAATTCCCGAGCTTCTCGAACACAACAGAAACGAAGTCGCATTTTCCTACAACCGACCCAGAAACCTCTGATCCGAATCCATGATGGGATTTCCCCCTGCACACGTTGTCAGGGAGACACCTCATGTACCTGGATTACCTCGTGCCCTCCTGGCACGAGATCGAGTCACGTGTCATCGCCATGGTGGGCTACCAAAGCGGTGGCCAGTTCCGCACTAGCCTCAATGAAGAGGTCGCCTCACTGGGCCTCAACCTGCGCCGGATCGAAGCTGTCCGCACAGCCTTCTA  >  NC_002947/4798832‑4799129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.