New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 126240374 (0.990)6 (0.080) 6/246 NT 7.2% coding (238/1116 nt) PP_1104 AotO‑related protein
?NC_002947 = 1262413 82 (1.140)coding (228/1116 nt) PP_1104 AotO‑related protein

Only 100 of 105 total aligned reads displayed.

AGTGCAAGGTTGTGCGTCGGGTCCTGGGTAAGGTGTTCTTCGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCAGTGAGGCCTGGATATAGACTTTGC  >  NC_002947/1262255‑1262552
                                                                                                                                                     |                                                                                                                                                     
aGTGCAAGGTTGTGCGTCGGGTCCTGGGTAAGGTGTTCTTCGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑aaa                                                                                                                                                      <  1:760448/150‑1 (MQ=255)
 gTGCAAGGTTGTGCGTCGGGTCCTGGGTAAGGTGTTCTTCGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAAc                                                                                                                                                     >  2:1341547/1‑150 (MQ=255)
  tGCAAGGTTGTGCGTCGGGTCCTGGGTAAGGTGTTCTTCGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑aaa                                                                                                                                                      <  1:1214752/148‑1 (MQ=255)
  tGCAAGGTTGTGCGTCGGGTCCTGGGTAAGGTGTTCTTCGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑aaa                                                                                                                                                      >  2:1214752/1‑148 (MQ=255)
  tGCAAGGTTGTGCGTCGGGTCCTGGGTAAGGTGTTCTTCGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAAcc                                                                                                                                                    >  2:1575246/1‑150 (MQ=255)
  tGCAAGGTTGTGCGTCGGGTCCTGGGTAAGGTGTTCTTCGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAAcc                                                                                                                                                    >  2:351158/1‑150 (MQ=255)
    cAAGGTTGTGCGTCGGGTCCTGGGTAAGGTGTTCTTCGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCa                                                                                                                                                  >  1:824748/1‑150 (MQ=255)
        gTTGTGCGTCGGGTCCTGGGTAAGGTGTTCTTCGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTGCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCgg                                                                                                                                              <  1:179773/150‑1 (MQ=255)
             gCGTCGGGTCCTGGGTAAGGTGTTCTTCGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGttgg                                                                                                                                         <  2:1404429‑M2/150‑5 (MQ=255)
                 ctggtcCTGGGTCAGGTGTTCTTCGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGttggagca                                                                                                                                     >  1:566280‑M2/3‑142 (MQ=255)
                       cTGGGTAAGGTGTTCTTCGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCAc                                                                                                                               >  1:1445056/1‑150 (MQ=255)
                           gTAAGGTGTTCTTCGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGt                                                                                                                           <  1:1900880/150‑1 (MQ=255)
                              aGGTGTTCTTCGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATg                                                                                                                        <  1:534348/150‑1 (MQ=255)
                                      ttcGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTAt                                                                                                                         >  2:1235981/1‑141 (MQ=255)
                                      ttcGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTAt                                                                                                                         <  1:1235981/141‑1 (MQ=255)
                                      ttcGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTcgcg                                                                                                                >  1:1162350/1‑150 (MQ=255)
                                      ttcGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTcgcg                                                                                                                >  1:1149304/1‑150 (MQ=255)
                                           tCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCa                                                                                                           >  1:1792088/1‑150 (MQ=255)
                                           tCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTAA‑AAACACAGAGGGTTAGCCACCGGGACCAGTATGATCTCGCGCTGCa                                                                                                           >  1:1560864/1‑150 (MQ=255)
                                           tCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTATAGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCAACAGTATGATCTCGCGCTGCa                                                                                                           >  1:48010/1‑150 (MQ=255)
                                             tGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGt                                                                                                         >  2:1433990/1‑150 (MQ=255)
                                              ggTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTc                                                                                                        >  1:842444/1‑150 (MQ=255)
                                                tCGCCGATGCTGTCCGACAGGTAGACGAAGTTGCGTTTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGAGTGGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCgg                                                                                                      >  2:1180022/1‑150 (MQ=255)
                                                  gCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCTGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGcc                                                                                                    <  1:1071783/150‑1 (MQ=255)
                                                  gCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGcc                                                                                                    >  1:1029431/1‑150 (MQ=255)
                                                     gATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTg                                                                                                 >  2:822800/1‑150 (MQ=255)
                                                         cTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGt                                                                                             <  1:162254/150‑1 (MQ=255)
                                                          tGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGtt                                                                                            >  2:1064555/1‑150 (MQ=255)
                                                           gTCCGACAGGTAGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATTAAGCAGCACTTGCTCA‑AATTTTTCCTCTTTGGCCTCCTTCACCATTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTc                                                                                           <  1:1180022/150‑1 (MQ=255)
                                                            tCCGACAGGTCGAGTCGAGTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTcc                                                                                          >  1:1005155/1‑150 (MQ=255)
                                                             ccGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCa                                                                                         <  2:1149304/150‑1 (MQ=255)
                                                               gACAGGAGGAGGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCGACGGCGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGc                                                                                       >  2:1005756/1‑150 (MQ=255)
                                                                    gTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGc                                                                                  >  1:187398/1‑150 (MQ=255)
                                                                    gTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGc                                                                                  <  1:916677/150‑1 (MQ=255)
                                                                       gacgaAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAg                                                                               >  2:1559568/1‑150 (MQ=255)
                                                                        acgaAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAgg                                                                              >  1:1515013/1‑150 (MQ=255)
                                                                         cgaAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAggc                                                                             <  1:1089817/150‑1 (MQ=255)
                                                                          gaAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAggcg                                                                            >  1:710136/1‑150 (MQ=255)
                                                                             gTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AACCCGGTGGGTttggagcaagtgctgc                                                                                                                             <  2:1200120‑M2/98‑17 (MQ=255)
                                                                             gTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AA‑CCCGGTGGGtttggagcaagtgctgc                                                                                                                            >  1:1200120‑M2/1‑81 (MQ=255)
                                                                                 cGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTg                                                                     <  1:548326/150‑1 (MQ=255)
                                                                                  gATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAg                                                                                                                            <  2:233784/94‑1 (MQ=255)
                                                                                  gATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAg                                                                                                                            >  1:233784/1‑94 (MQ=255)
                                                                                   aTTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCggg                                                                                                                                             >  1:58396/1‑76 (MQ=255)
                                                                                   aTTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCggg                                                                                                                                             <  2:58396/76‑1 (MQ=255)
                                                                                    ttGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAgg                                                                  >  1:565587/1‑150 (MQ=255)
                                                                                    ttGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAgg                                                                  <  2:754779/150‑1 (MQ=255)
                                                                                        cgTTCCCGCCGCTTTGTAGTTCCCCTCCCCCCGATGCTGCATCCAGCAGCACTTGCTCC‑AAAGCCTACAACCCAGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGcc                                                              <  1:34692/149‑1 (MQ=255)
                                                                                         gTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCa                                                             <  2:187398/150‑1 (MQ=255)
                                                                                          ttCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAg                                                            >  2:1256692/1‑150 (MQ=255)
                                                                                            ctcGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGc                                                          >  2:272522/1‑150 (MQ=255)
                                                                                               gccgcTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAcccggtgggtttggagcaa                                                                                                                                    >  2:1523831‑M1/1‑54 (MQ=255)
                                                                                               gccgcTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAcccggtgggtttggagcaa                                                                                                                                    <  1:1523831‑M1/73‑20 (MQ=255)
                                                                                               gccgcTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGAt                                                                                                                      <  2:1817077/87‑1 (MQ=255)
                                                                                               gccgcTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGAt                                                                                                                      >  1:1817077/1‑87 (MQ=255)
                                                                                                ccgcTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAggc                                                                             >  1:161427/1‑127 (MQ=255)
                                                                                                ccgcTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAggc                                                                             <  2:161427/127‑1 (MQ=255)
                                                                                                ccgcTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTAcc                                                      <  2:1515013/150‑1 (MQ=255)
                                                                                                  gcTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAg                                                    <  1:722665/150‑1 (MQ=255)
                                                                                                     ttGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGGCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCAt                                                 <  2:824748/150‑1 (MQ=255)
                                                                                                           ttCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCCAAAcccggtgggtttg                                                                                                                                          >  2:1837105‑M1/1‑43 (MQ=255)
                                                                                                           ttCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCCAAAcccggtgggtttg                                                                                                                                          <  1:1837105‑M1/56‑14 (MQ=255)
                                                                                                           ttCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCgg                                           >  1:1727126/1‑150 (MQ=255)
                                                                                                              aaaaCGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGt                                                                                             >  2:303370/1‑97 (MQ=255)
                                                                                                              aaaaCGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGt                                                                                             <  1:303370/97‑1 (MQ=255)
                                                                                                              aaaaCGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAg                                        <  1:1634245/150‑1 (MQ=255)
                                                                                                                 aCGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCg                                                                                                                                   >  2:1226437/1‑56 (MQ=255)
                                                                                                                 aCGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCg                                                                                                                                   <  1:1226437/56‑1 (MQ=255)
                                                                                                                     cccAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCtcgtcg                                 >  2:1604221/1‑150 (MQ=255)
                                                                                                                      ccAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCATGCGGCCTTGCTGTTCCAGCTAGGCCAGGCTGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCgg                                >  1:890747/1‑150 (MQ=255)
                                                                                                                        aaTGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCg                              >  1:1584741/1‑150 (MQ=255)
                                                                                                                            gTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGa                                                                    <  2:740206/108‑1 (MQ=255)
                                                                                                                            gTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGa                                                                    >  1:740206/1‑108 (MQ=255)
                                                                                                                            gTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCa                          >  2:644077/1‑150 (MQ=255)
                                                                                                                            gTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCa                          >  1:1101969/1‑150 (MQ=255)
                                                                                                                                aTCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGc                                                               <  2:1692902/109‑1 (MQ=255)
                                                                                                                                aTCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGc                                                               >  1:1692902/1‑109 (MQ=255)
                                                                                                                                aTCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCAGTGa                      <  2:1525808/150‑1 (MQ=255)
                                                                                                                                 tCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCAGTGAg                     <  2:1101969/150‑1 (MQ=255)
                                                                                                                                     gcagcaCTTGCTCCAAAcccaccgggttggagcaagtgctgctggatgcaccattggggcgttttgaactgcaaagcggcgagaacttcaatcgcaac                                                                      >  1:1200120‑M1/1‑17 (MQ=255)
                                                                                                                                      cagcaCTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCAGTGAGGCCTg                <  2:710136/150‑1 (MQ=255)
                                                                                                                                          aCTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCAGTGAGGCCTGGata            <  1:1404429/150‑1 (MQ=255)
                                                                                                                                           cTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCAGTGAGGCCTGGatat           >  1:100815/1‑150 (MQ=255)
                                                                                                                                           cTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCAGTGAGGCCTGGatat           >  2:1132093/1‑150 (MQ=255)
                                                                                                                                            ttGCTCC‑AAACCCACCGGGttggagcaagtgctgctggatgcaccattggggcgttttgaactgcaaagcggc                                                                                       <  1:1523831‑M2/73‑55 (MQ=255)
                                                                                                                                            ttGCTCC‑AAACCCACCGGGttggagcaagtgctgctggatgcaccattggggcgttttgaactgcaaagcggc                                                                                       >  2:1523831‑M2/1‑19 (MQ=255)
                                                                                                                                            ttGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCg                                            <  2:1831693/116‑1 (MQ=255)
                                                                                                                                            ttGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCg                                            >  1:1831693/1‑116 (MQ=255)
                                                                                                                                             tGCTCC‑AAcccggtgggtttggagcaagtgctgctggatgcaccattggggcgttttgaactgcaaagcggcgagaacttcaatcgcaacttcgtcgacctgtcggacagcatcggcgaccagatcgaagaacacctgacccaggaccag         >  1:566280‑M1/1‑8 (MQ=255)
                                                                                                                                                tCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCAGTGAGGCCTGGATATAGACt      >  2:113779/1‑150 (MQ=255)
                                                                                                                                                tCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCAGTGAGGCCTGGATATAGACt      >  2:553182/1‑150 (MQ=255)
                                                                                                                                                tCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCAGTGAGGCCTGGATATAGACt      >  2:428033/1‑150 (MQ=255)
                                                                                                                                                 cc‑AAcccggtgggtttggagcaagtgctgctggatgcaccattggggcgttttgaactgcaaagcggcgagaacttcaatcgcaacttcgtcgacctgtcggacagcatcggcgaccagatcgaagaacaccttacccaggacccgacgc     <  2:1404429‑M1/150‑147 (MQ=255)
                                                                                                                                                 cc‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCAGTGAGGCCTGGATATAGACtt     <  2:826998/150‑1 (MQ=255)
                                                                                                                                                  c‑AAACCCACCGGGtttggagcaagtgctgctggatgcaccattggggcgttttgaa                                                                                                  >  2:1837105‑M2/1‑13 (MQ=255)
                                                                                                                                                  c‑AAACCCACCGGGtttggagcaagtgctgctggatgcaccattggggcgttttgaa                                                                                                  <  1:1837105‑M2/56‑44 (MQ=255)
                                                                                                                                                  c‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCAGTGAGGCCTGGATATAGACttt    >  2:1595913/1‑150 (MQ=255)
                                                                                                                                                    aaaCCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCAGTGAGGCCTGGATATAGACTTTg   >  2:665247/1‑150 (MQ=255)
                                                                                                                                                     aaCCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCAGTGAGGCCTGGATATAGACTTTGc  <  2:100815/150‑1 (MQ=255)
                                                                                                                                                     aaCCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCAGTGAGGCCTGGATATAGACTTTGc  <  2:1560864/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AGTGCAAGGTTGTGCGTCGGGTCCTGGGTAAGGTGTTCTTCGATCTGGTCGCCGATGCTGTCCGACAGGTCGACGAAGTTGCGATTGAAGTTCTCGCCGCTTTGCAGTTCAAAACGCCCCAATGGTGCATCCAGCAGCACTTGCTCC‑AAACCCACCGGGTTGGCCACCGGCACCAGTATGATCTCGCGCTGCAGTCGGCCTTGCTGTTCCAGCTCGGCCAGGCGGCGCTTGAGGTGCCAGGCTACCAGCATGCCCGGCAGCTCGTCGGCGTGCAGTGAGGCCTGGATATAGACTTTGC  >  NC_002947/1262255‑1262552

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.