New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1639493	71 (0.950)	4 (0.060)	4/234	NT	5.2%	intergenic (‑41/‑270)	czcR‑III/PP_1439	response regulator/hypothetical protein
	?	NC_002947	= 1639502	80 (1.160)					intergenic (‑50/‑261)	czcR‑III/PP_1439	response regulator/hypothetical protein

CCGTCGGTGCCTGTGTGGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGC  >  NC_002947/1639346‑1639641                                                                                                                                                    |                                                                                                                                                     ccGTCGGTGCCTGTGTGGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTa                                                                                                                                                    <  2:1417596/150‑1 (MQ=255)      ggTGCCTGTGTGGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGAc                                                                                                                                               <  1:905903/150‑1 (MQ=255)                tgGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATcagggtca                                                                                                                                     >  1:902085‑M2/1‑142 (MQ=255)                 gggCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATcagggtcaa                                                                                                                                    >  1:1716925‑M2/1‑141 (MQ=255)                       aGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGccc                                                                                                                              >  1:1124713/1‑150 (MQ=255)                           gACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAAt                                                                                                                          >  1:893206/1‑150 (MQ=255)                           gACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAAt                                                                                                                          <  1:1601346/150‑1 (MQ=255)                             ccACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATca                                                                                                                                           >  1:796895‑M2/1‑129 (MQ=255)                             ccACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATca                                                                                                                                           <  2:796895‑M2/131‑3 (MQ=255)                              cACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGccc                                                                                                                              <  1:1307909/143‑1 (MQ=255)                              cACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGccc                                                                                                                              >  2:1307909/1‑143 (MQ=255)                               aCGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTa                                                                                                                      <  1:801202/150‑1 (MQ=255)                                cGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTAc                                                                                                                     >  2:926455/1‑150 (MQ=255)                                      cGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGTGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATg                                                                                                               >  1:1504673/1‑150 (MQ=255)                                        ttCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGaa                                                                                                             >  1:187762/1‑150 (MQ=255)                                          ctcGCGAAGGTCCTGTTGCAGGTAGTCGGCGGTACGCCGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACTCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGaaaa                                                                                                           >  2:1763716/1‑150 (MQ=255)                                           tcGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGaaaaa                                                                                                          >  2:178093/1‑150 (MQ=255)                                           gcgcgAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGaaaaa                                                                                                          >  1:1880923/2‑150 (MQ=255)                                              cgAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAgg                                                                                                       >  1:401125/1‑150 (MQ=255)                                                 aGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCt                                                                                                    <  2:1556649/150‑1 (MQ=255)                                                  ggCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAg                                                                                                        >  2:467202/1‑145 (MQ=255)                                                  ggCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAg                                                                                                        <  1:467202/145‑1 (MQ=255)                                                   gCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGATGTCACTAcagggtcaagaatcgtcc                                                                                                                           >  1:1562846‑M2/1‑107 (MQ=255)                                                   gCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGATGTCACTAcagggtcaagaatcgtcc                                                                                                                           <  2:1562846‑M2/125‑19 (MQ=255)                                                    cccTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCACGGAGGTTACGGCATGAAAAAAGGCCTGCg                                                                                                 >  1:1433955/1‑150 (MQ=255)                                                     ccTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCt                                                                                                    >  2:1516764/1‑146 (MQ=255)                                                     ccTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCt                                                                                                    <  1:1516764/146‑1 (MQ=255)                                                     ccTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCgg                                                                                                >  2:775321/1‑150 (MQ=255)                                                        gTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGc                                                                                             <  1:794360/150‑1 (MQ=255)                                                        gTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGc                                                                                             <  1:405492/150‑1 (MQ=255)                                                            cAGGTAGTCGGCGGTGCGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGAt                                                                                         <  2:182872/150‑1 (MQ=255)                                                             aGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATa                                                                                        >  1:1335324/1‑150 (MQ=255)                                                                  gTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGa                                                                                   <  2:1124713/150‑1 (MQ=255)                                                                   tCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGAt                                                                                  >  1:178289/1‑150 (MQ=255)                                                                          tACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAAt                                                                           >  1:865838/1‑150 (MQ=255)                                                                                   cGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGtt                                                                  >  1:1245709/1‑150 (MQ=255)                                                                                       cTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCt                                                              >  1:1139809/1‑150 (MQ=255)                                                                                        tCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGatgtcactacagggtcaa                                                                                                                                    <  1:148661‑M1/79‑19 (MQ=255)                                                                                        tCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGatgtcactacagggtcaa                                                                                                                                    >  2:148661‑M1/1‑61 (MQ=255)                                                                                        tCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGGGGCGGAACATCAGCACATGGAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTg                                                             >  1:1170401/1‑150 (MQ=255)                                                                                           atgatCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTTTAGTGACATCGGGTTCAAGCTCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTTTTATTCTGCTTTTATCTGGct                                                          <  2:1342326/150‑1 (MQ=255)                                                                                           atgatCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCATGTAGTGCCATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGct                                                          <  2:965529/150‑1 (MQ=255)                                                                                           atcatCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGAGCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGct                                                          <  1:1104965/147‑1 (MQ=255)                                                                                             gatCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGctgt                                                        <  2:401125/150‑1 (MQ=255)                                                                                                     ggCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCgg                                                >  1:1460246/1‑150 (MQ=255)                                                                                                      gcgcATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCggg                                               >  1:1631283/1‑150 (MQ=255)                                                                                                        gcATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACg                                                                                                                    <  2:1652403/79‑1 (MQ=255)                                                                                                        gcATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACg                                                                                                                    >  1:1652403/1‑79 (MQ=255)                                                                                                        gcATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAAc                                                                                      <  1:1602239/109‑1 (MQ=255)                                                                                                        gcATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAAc                                                                                      >  2:1602239/1‑109 (MQ=255)                                                                                                        gcATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGcc                                             >  2:1642230/1‑150 (MQ=255)                                                                                                        gcATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGcc                                             >  1:1864618/1‑150 (MQ=255)                                                                                                             gggggCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTc                                        <  2:318384/150‑1 (MQ=255)                                                                                                               gggCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTcgc                                      <  2:1335324/150‑1 (MQ=255)                                                                                                               gggCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTcgc                                      <  1:557101/150‑1 (MQ=255)                                                                                                                 gCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGa                                    <  1:926455/150‑1 (MQ=255)                                                                                                                  tctggTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTTTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAg                                   <  2:66006/147‑1 (MQ=255)                                                                                                                   tCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGa                                                                                   >  2:796/1‑101 (MQ=255)                                                                                                                   tCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGa                                                                                   <  1:796/101‑1 (MQ=255)                                                                                                                      gTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTaaa                               <  2:893206/150‑1 (MQ=255)                                                                                                                      aatggTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTaga                               >  1:66006/5‑148 (MQ=255)                                                                                                                          gTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACg                                                                                     <  2:1830939/92‑1 (MQ=255)                                                                                                                          gTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACg                                                                                     >  1:1830939/1‑92 (MQ=255)                                                                                                                           ttGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCcgc                          >  2:300660/1‑150 (MQ=255)                                                                                                                                 ggggACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCTCCtac                    <  2:1504673/150‑3 (MQ=255)                                                                                                                                  gggACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTa                   >  2:771498/1‑150 (MQ=255)                                                                                                                                   ggACGATTCTTGACCCTGtagtgacatcagggtcaagaatcgtcccctttcaacataccgagccccccatgcgcctactgatcatcgaggacgagctgcgtaccgccgactacctgcaacagggc                                           <  2:1562846‑M1/125‑108 (MQ=255)                                                                                                                                   ggACGATTCTTGACCCTGtagtgacatcagggtcaagaatcgtcccctttcaacataccgagccccccatgcgcctactgatcatcgaggacgagctgcgtaccgccgactacctgcaacagggc                                           >  1:1562846‑M1/1‑18 (MQ=255)                                                                                                                                   cgccGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTCGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAg                  >  1:65923/4‑150 (MQ=255)                                                                                                                                      cGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCGGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGaa               <  1:617908/150‑1 (MQ=255)                                                                                                                                       gATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTcgc                                      >  1:1711388/1‑126 (MQ=255)                                                                                                                                       gATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTcgc                                      <  2:1711388/126‑1 (MQ=255)                                                                                                                                       gATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAg                  >  1:1924075/1‑146 (MQ=255)                                                                                                                                       gATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAg                  <  2:1924075/146‑1 (MQ=255)                                                                                                                                         ttCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTa                   >  2:1326769/1‑143 (MQ=255)                                                                                                                                         ttCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTa                   <  1:1326769/143‑1 (MQ=255)                                                                                                                                         ttCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACgg            <  2:1245709/150‑1 (MQ=255)                                                                                                                                            ttGACCCTGatgtcactacagggtcaagaatcgtcccctttcaacataccgagccccccatgcgcctactgatcatcgaggacgagctgcgtaccgccgactacctgcaacagggccttcgcgagaacggttacgtggtcgactgcgccc         >  1:1716925‑M1/1‑9 (MQ=255)                                                                                                                                            ttGACCCTGTAGTGACATcagggtcaagaatcgtcccctttcaacataccgagccccccatgcgcctactgatcatcga                                                                                >  2:148661‑M2/1‑18 (MQ=255)                                                                                                                                            ttGACCCTGTAGTGACATcagggtcaagaatcgtcccctttcaacataccgagccccccatgcgcctactgatcatcga                                                                                <  1:148661‑M2/79‑62 (MQ=255)                                                                                                                                            ttGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGa                                    <  2:468802/123‑1 (MQ=255)                                                                                                                                            ttGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGa                                    >  1:468802/1‑123 (MQ=255)                                                                                                                                            ttGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGtt         <  2:1711744/150‑1 (MQ=255)                                                                                                                                            ttGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGtt         >  1:1711744/1‑150 (MQ=255)                                                                                                                                             tGACCCTGatgtcactacagggtcaagaatcgtcccctttcaacataccgagccccccatgcgcctactgatcatcgaggacgagctgcgtaccgccgactacctgcaacagggccttcgcgagaacggttacgtggtcgactgcgccca        >  1:902085‑M1/1‑8 (MQ=255)                                                                                                                                               aCCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGGGTAAACCCGTTCCTACAGGCGCGGGTTTAc      <  1:1763716/150‑1 (MQ=37)                                                                                                                                                cccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGc                                                                                                      <  1:25985/53‑1 (MQ=255)                                                                                                                                                cccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGc                                                                                                      >  2:25985/1‑53 (MQ=255)                                                                                                                                                 ccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGa                                    <  2:1721422/118‑1 (MQ=255)                                                                                                                                                 ccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGa                                    >  1:1721422/1‑118 (MQ=255)                                                                                                                                                  cTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTc                                                                         <  2:387655/80‑1 (MQ=255)                                                                                                                                                  cTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTc                                                                         >  1:387655/1‑80 (MQ=255)                                                                                                                                                  cTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGt          >  2:757889/1‑143 (MQ=255)                                                                                                                                                  cTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGt          <  1:757889/143‑1 (MQ=255)                                                                                                                                                   tGatgtcactacagggtcaagaatcgtcccctttcaacataccgagccccccatgcgcctactgatcatcgaggacgagctgcgtaccgccgactacctgcaacagggccttcgcgagaacggttacgtgg                     <  2:796895‑M1/131‑130 (MQ=255)                                                                                                                                                   tGatgtcactacagggtcaagaatcgtcccctttcaacataccgagccccccatgcgcctactgatcatcgaggacgagctgcgtaccgccgactacctgcaacagggccttcgcgagaacggttacgtgg                     >  1:796895‑M1/1‑2 (MQ=255)                                                                                                                                                   tGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCcgc  >  2:1107175/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CCGTCGGTGCCTGTGTGGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGC  >  NC_002947/1639346‑1639641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.