New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1639493	71 (0.950)	4 (0.060)	4/234	NT	5.2%	intergenic (‑41/‑270)	czcR‑III/PP_1439	response regulator/hypothetical protein
	?	NC_002947	= 1639502	80 (1.160)					intergenic (‑50/‑261)	czcR‑III/PP_1439	response regulator/hypothetical protein

TGGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGG  >  NC_002947/1639361‑1639648                                                                                                                                              |                                                                                                                                                   tgGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATcagggtca                                                                                                                                            >  1:902085‑M2/1‑142 (MQ=255)  gggCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATcagggtcaa                                                                                                                                           >  1:1716925‑M2/1‑141 (MQ=255)        aGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGccc                                                                                                                                     >  1:1124713/1‑150 (MQ=255)            gACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAAt                                                                                                                                 >  1:893206/1‑150 (MQ=255)            gACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAAt                                                                                                                                 <  1:1601346/150‑1 (MQ=255)              ccACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATca                                                                                                                                                  <  2:796895‑M2/131‑3 (MQ=255)              ccACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATca                                                                                                                                                  >  1:796895‑M2/1‑129 (MQ=255)               cACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGccc                                                                                                                                     >  2:1307909/1‑143 (MQ=255)               cACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGccc                                                                                                                                     <  1:1307909/143‑1 (MQ=255)                aCGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTa                                                                                                                             <  1:801202/150‑1 (MQ=255)                 cGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTAc                                                                                                                            >  2:926455/1‑150 (MQ=255)                       cGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGTGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATg                                                                                                                      >  1:1504673/1‑150 (MQ=255)                         ttCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGaa                                                                                                                    >  1:187762/1‑150 (MQ=255)                           ctcGCGAAGGTCCTGTTGCAGGTAGTCGGCGGTACGCCGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACTCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGaaaa                                                                                                                  >  2:1763716/1‑150 (MQ=255)                            tcGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGaaaaa                                                                                                                 >  2:178093/1‑150 (MQ=255)                            gcgcgAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGaaaaa                                                                                                                 >  1:1880923/2‑150 (MQ=255)                               cgAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAgg                                                                                                              >  1:401125/1‑150 (MQ=255)                                  aGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCt                                                                                                           <  2:1556649/150‑1 (MQ=255)                                   ggCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAg                                                                                                               >  2:467202/1‑145 (MQ=255)                                   ggCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAg                                                                                                               <  1:467202/145‑1 (MQ=255)                                    gCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGATGTCACTAcagggtcaagaatcgtcc                                                                                                                                  >  1:1562846‑M2/1‑107 (MQ=255)                                    gCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGATGTCACTAcagggtcaagaatcgtcc                                                                                                                                  <  2:1562846‑M2/125‑19 (MQ=255)                                     cccTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCACGGAGGTTACGGCATGAAAAAAGGCCTGCg                                                                                                        >  1:1433955/1‑150 (MQ=255)                                      ccTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCt                                                                                                           >  2:1516764/1‑146 (MQ=255)                                      ccTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCt                                                                                                           <  1:1516764/146‑1 (MQ=255)                                      ccTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCgg                                                                                                       >  2:775321/1‑150 (MQ=255)                                         gTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGc                                                                                                    <  1:794360/150‑1 (MQ=255)                                         gTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGc                                                                                                    <  1:405492/150‑1 (MQ=255)                                             cAGGTAGTCGGCGGTGCGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGAt                                                                                                <  2:182872/150‑1 (MQ=255)                                              aGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATa                                                                                               >  1:1335324/1‑150 (MQ=255)                                                   gTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGa                                                                                          <  2:1124713/150‑1 (MQ=255)                                                    tCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGAt                                                                                         >  1:178289/1‑150 (MQ=255)                                                           tACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAAt                                                                                  >  1:865838/1‑150 (MQ=255)                                                                    cGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGtt                                                                         >  1:1245709/1‑150 (MQ=255)                                                                        cTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCt                                                                     >  1:1139809/1‑150 (MQ=255)                                                                         tCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGGGGCGGAACATCAGCACATGGAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTg                                                                    >  1:1170401/1‑150 (MQ=255)                                                                            atgatCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTTTAGTGACATCGGGTTCAAGCTCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTTTTATTCTGCTTTTATCTGGct                                                                 <  2:1342326/150‑1 (MQ=255)                                                                            atgatCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCATGTAGTGCCATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGct                                                                 <  2:965529/150‑1 (MQ=255)                                                                            atcatCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGAGCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGct                                                                 <  1:1104965/147‑1 (MQ=255)                                                                              gatCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGctgt                                                               <  2:401125/150‑1 (MQ=255)                                                                                      ggCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCgg                                                       >  1:1460246/1‑150 (MQ=255)                                                                                       gcgcATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCggg                                                      >  1:1631283/1‑150 (MQ=255)                                                                                         gcATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACg                                                                                                                           <  2:1652403/79‑1 (MQ=255)                                                                                         gcATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACg                                                                                                                           >  1:1652403/1‑79 (MQ=255)                                                                                         gcATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAAc                                                                                             <  1:1602239/109‑1 (MQ=255)                                                                                         gcATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAAc                                                                                             >  2:1602239/1‑109 (MQ=255)                                                                                         gcATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGcc                                                    >  2:1642230/1‑150 (MQ=255)                                                                                         gcATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGcc                                                    >  1:1864618/1‑150 (MQ=255)                                                                                              gggggCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTc                                               <  2:318384/150‑1 (MQ=255)                                                                                                gggCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTcgc                                             <  1:557101/150‑1 (MQ=255)                                                                                                gggCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTcgc                                             <  2:1335324/150‑1 (MQ=255)                                                                                                  gCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGa                                           <  1:926455/150‑1 (MQ=255)                                                                                                   tctggTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTTTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAg                                          <  2:66006/147‑1 (MQ=255)                                                                                                    tCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGa                                                                                          <  1:796/101‑1 (MQ=255)                                                                                                    tCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGa                                                                                          >  2:796/1‑101 (MQ=255)                                                                                                       gTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTaaa                                      <  2:893206/150‑1 (MQ=255)                                                                                                       aatggTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTaga                                      >  1:66006/5‑148 (MQ=255)                                                                                                           gTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACg                                                                                            >  1:1830939/1‑92 (MQ=255)                                                                                                           gTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACg                                                                                            <  2:1830939/92‑1 (MQ=255)                                                                                                            ttGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCcgc                                 >  2:300660/1‑150 (MQ=255)                                                                                                                  ggggACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCTCCtac                           <  2:1504673/150‑3 (MQ=255)                                                                                                                   gggACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTa                          >  2:771498/1‑150 (MQ=255)                                                                                                                    cgccGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTCGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAg                         >  1:65923/4‑150 (MQ=255)                                                                                                                       cGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCGGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGaa                      <  1:617908/150‑1 (MQ=255)                                                                                                                        gATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTcgc                                             >  1:1711388/1‑126 (MQ=255)                                                                                                                        gATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTcgc                                             <  2:1711388/126‑1 (MQ=255)                                                                                                                        gATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAg                         <  2:1924075/146‑1 (MQ=255)                                                                                                                        gATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAg                         >  1:1924075/1‑146 (MQ=255)                                                                                                                          ttCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTa                          >  2:1326769/1‑143 (MQ=255)                                                                                                                          ttCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTa                          <  1:1326769/143‑1 (MQ=255)                                                                                                                          ttCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACgg                   <  2:1245709/150‑1 (MQ=255)                                                                                                                             ttGACCCTGTAGTGACATcagggtcaagaatcgtcccctttcaacataccgagccccccatgcgcctactgatcatcga                                                                                       <  1:148661‑M2/79‑62 (MQ=255)                                                                                                                             ttGACCCTGTAGTGACATcagggtcaagaatcgtcccctttcaacataccgagccccccatgcgcctactgatcatcga                                                                                       >  2:148661‑M2/1‑18 (MQ=255)                                                                                                                             ttGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGa                                           >  1:468802/1‑123 (MQ=255)                                                                                                                             ttGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGa                                           <  2:468802/123‑1 (MQ=255)                                                                                                                             ttGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGtt                <  2:1711744/150‑1 (MQ=255)                                                                                                                             ttGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGtt                >  1:1711744/1‑150 (MQ=255)                                                                                                                                aCCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGGGTAAACCCGTTCCTACAGGCGCGGGTTTAc             <  1:1763716/150‑1 (MQ=37)                                                                                                                                 cccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGc                                                                                                             >  2:25985/1‑53 (MQ=255)                                                                                                                                 cccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGc                                                                                                             <  1:25985/53‑1 (MQ=255)                                                                                                                                  ccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGa                                           >  1:1721422/1‑118 (MQ=255)                                                                                                                                  ccTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGa                                           <  2:1721422/118‑1 (MQ=255)                                                                                                                                   cTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTc                                                                                <  2:387655/80‑1 (MQ=255)                                                                                                                                   cTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTc                                                                                >  1:387655/1‑80 (MQ=255)                                                                                                                                   cTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGt                 <  1:757889/143‑1 (MQ=255)                                                                                                                                   cTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGt                 >  2:757889/1‑143 (MQ=255)                                                                                                                                    tGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCcgc         >  2:1107175/1‑150 (MQ=255)                                                                                                                                        gTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTctgct                                                                            >  2:1244154/1‑79 (MQ=255)                                                                                                                                        gTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTctgct                                                                            <  1:1244154/79‑1 (MQ=255)                                                                                                                                         tGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGGGTAAACCCGTTCCTACAGGCGCGGGTTTACTCGCGAaga    <  1:775321/150‑1 (MQ=25)                                                                                                                                         tGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGGGTAAACCCGTTCCTACAGGCGCGGGTTTACTCGCGAaga    <  2:1433066/150‑1 (MQ=25)                                                                                                                                           aCATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGGAGGAACGGGGTTAACACAGAAGAgg  >  1:1514940/1‑150 (MQ=255)                                                                                                                                              |                                                                                                                                                   TGGGCGCAGTCGACCACGTAACCGTTCTCGCGAAGGCCCTGTTGCAGGTAGTCGGCGGTACGCAGCTCGTCCTCGATGATCAGTAGGCGCATGGGGGGCTCGGTATGTTGAAAGGGGACGATTCTTGACCCTGTAGTGACATCAGGGTCAAGCGCCCCAATGTTACGGCATGAAAAAAGGCCTGCGGTGCAGATAACGGATTTGTAATTCTGCTGTTATCTGGCTGTCTGTTCGGGCCTCTTCGCGAGTAAACCCGCGCCTGTAGGAACGGGTTTACCCGCGAAGAGG  >  NC_002947/1639361‑1639648

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.