New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 181147976 (1.020)7 (0.110) 5/208 NT 9.8% intergenic (+44/+84) ispD/PP_1615 2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase/LysR family transcriptional regulator
?NC_002947 = 1811513 67 (1.100)intergenic (+78/+50) ispD/PP_1615 2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase/LysR family transcriptional regulator

Only 100 of 156 total aligned reads displayed.

GTCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTAATCCACCAGCCGCCGTAC  >  NC_002947/1811330‑1811628
                                                                                                                                                     |                                                                                                                                                     
gTCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTAC                                                                                                                                                       >  1:1232590‑M1/1‑150 (MQ=255)
  ccGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACaa                                                                                                                                                     <  2:1541906/150‑1 (MQ=255)
      tCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGa                                                                                                                                                 >  2:339657/1‑150 (MQ=255)
      tCAGGCGCCGCGGCTGGGGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGa                                                                                                                                                 <  1:1272444/150‑1 (MQ=255)
      gcAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGGCAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGa                                                                                                                                                 <  2:240982/149‑1 (MQ=255)
        aGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGAtt                                                                                                                                               >  1:1252970/1‑150 (MQ=255)
                cgGCTGGTGGAAGGGCGCAGTGACAACGTAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGAGCTGGCCTTTTCGAGGGTAAACCCGCTCCTACTATGGATTGCATCggt                                                                                                                                       <  2:1011394/150‑1 (MQ=255)
                    tggtggAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTGAACCCGCTCCTACAATGGATTGCGTCGGTGGtt                                                                                                                                   >  2:372374/1‑150 (MQ=255)
                     ggtggAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTg                                                                                                                                  <  1:650161/150‑1 (MQ=255)
                        ggAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGac                                                                                                                               >  1:1598922/1‑150 (MQ=255)
                         gAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGaca                                                                                                                              <  1:1284083/150‑1 (MQ=255)
                         gAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGaca                                                                                                                              <  1:786630/150‑1 (MQ=255)
                         gAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCAGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGaca                                                                                                                              <  1:1185781/150‑1 (MQ=255)
                           aGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTAC                                                                                                                                                       >  2:378308‑M1/1‑123 (MQ=255)
                           aGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTAC                                                                                                                                                       <  1:378308‑M1/123‑1 (MQ=255)
                              gcgcAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGAc                                                                                                                         <  1:1448986/150‑1 (MQ=255)
                                gcAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACcg                                                                                                                       >  2:1662470/1‑150 (MQ=255)
                                  aGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACcgtc                                                                                                                     <  1:556630/150‑1 (MQ=255)
                                  aGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACcgtc                                                                                                                     >  1:157709/1‑150 (MQ=255)
                                        aacaTAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGa                                                                                                                                >  2:1716597/1‑133 (MQ=255)
                                         acaTAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggag                                                                                                              <  2:1030438‑M2/150‑8 (MQ=255)
                                          caTAAAGGTGACCCGGCCCGAAGATCTCTAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagc                                                                                                             <  1:1697325‑M2/150‑9 (MQ=255)
                                          caTAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGTCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagc                                                                                                             <  2:1505694‑M2/150‑9 (MQ=255)
                                           aTAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagcg                                                                                                            >  1:1155587‑M2/1‑141 (MQ=255)
                                            tAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagcgg                                                                                                           <  1:995757‑M2/150‑11 (MQ=255)
                                            tAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTCGGCGGGTGAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgg                                                                                                           <  2:1398655‑M1/150‑45 (MQ=255)
                                            aaaagGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgg                                                                                                           <  1:1675825‑M1/149‑45 (MQ=255)
                                                      ccGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGa                                                                                                                          >  1:1704951/1‑125 (MQ=255)
                                                      ccGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGa                                                                                                                          <  2:1704951/125‑1 (MQ=255)
                                                      ccGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagcgggtttacccgc                                                                                                 >  1:1753287‑M2/1‑130 (MQ=255)
                                                      ccGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGGCggaggaccgggtttccccgc                                                                                                 <  2:905054‑M2/150‑21 (MQ=255)
                                                      ccGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTCGACACAGACCGTCgtaggagcgggtttacccgc                                                                                                 <  2:1343599‑M2/150‑21 (MQ=255)
                                                         gCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagcgggtttacccgcgaa                                                                                              >  2:1631967‑M2/1‑127 (MQ=255)
                                                         gCCCGAAGAGCTCGAATGGTTGCGCCGGCGCTGGGCGGGTAAACGCTGGGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagcgggtttacccgcgaa                                                                                              >  2:682224‑M2/1‑127 (MQ=255)
                                                           ccGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAaga                                                                                            <  1:339657/150‑1 (MQ=255)
                                                              actagctcGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTGGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGc                                                                                         <  1:1466961/145‑1 (MQ=255)
                                                              aaGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGc                                                                                         <  1:1662470/150‑1 (MQ=255)
                                                              aaGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTGCTCCTGGGCTGGCCCTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGc                                                                                         <  1:1873950/150‑1 (MQ=255)
                                                               aGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagc                                                                                                             >  1:201883‑M2/1‑121 (MQ=255)
                                                               aGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagc                                                                                                             <  2:201883‑M2/129‑9 (MQ=255)
                                                               aGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagc                                                                                                             >  1:1155309‑M2/1‑121 (MQ=255)
                                                               aGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagc                                                                                                             <  2:1155309‑M2/129‑9 (MQ=255)
                                                                gATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCa                                                                                       <  2:1697325/150‑1 (MQ=255)
                                                                    tcGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATg                                                                                                                                                   <  2:1889416/86‑1 (MQ=255)
                                                                    tcGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTAc                                                                                   >  2:1925068/1‑150 (MQ=255)
                                                                    tcGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAATAc                                                                                   >  1:320067/1‑150 (MQ=255)
                                                                       aaTGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACcag                                                                                <  1:847381/150‑1 (MQ=255)
                                                                       aaTGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACcag                                                                                <  1:876238/150‑1 (MQ=255)
                                                                              gcgcCAGCGCTGGGCGGGTAACCGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGCAAACCCGCTGCTACACTGGATCGCCTCGGTGGTGGGACCTTGCCCGTCGTCGGAGGGGGTGGTGCCGCGAAGAGGCCAGTACCAGCAGcaca                                                                         <  2:1163769/150‑1 (MQ=255)
                                                                                gcCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATc                                                                       <  1:937268/150‑1 (MQ=255)
                                                                                  cAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATccc                                                                     >  1:1858036/1‑150 (MQ=255)
                                                                                   aGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGACTGGCCTCTTCGCGGGTAAACCCGCTCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagtgggtttacccgcgaaaaggccagcccaggagaacgctcagc                                                                    <  2:176161‑M1/150‑84 (MQ=255)
                                                                                      tcttggCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGCCCCCCGGCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCa                                                                 <  1:1367642/146‑1 (MQ=37)
                                                                                      gcTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgggtttac                                                                                                     <  2:1782162‑M1/114‑51 (MQ=255)
                                                                                      gcTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgggtttac                                                                                                     >  1:1782162‑M1/1‑64 (MQ=255)
                                                                                      gcTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGATCTAACACGAAGATGCCAGTACCAGCAGCACATCCCGTCa                                                                 >  2:1095532/1‑150 (MQ=255)
                                                                                                tAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCCAAAAAACTTATTCCAGCAGCACATCCCGTCAGCCGAAACGa                                                       >  2:1400138/1‑150 (MQ=38)
                                                                                                 aaaCGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGtt                                                                                                                                   <  2:609232/73‑1 (MQ=255)
                                                                                                      cTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTcc                                                 <  2:1598922/150‑1 (MQ=255)
                                                                                                          gCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagcgggtttaccc                                                                                                   <  2:861027‑M2/96‑19 (MQ=255)
                                                                                                          gCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagcgggtttaccc                                                                                                   >  1:861027‑M2/1‑78 (MQ=255)
                                                                                                            gTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAAc                                           <  1:1340471/150‑1 (MQ=255)
                                                                                                                 ccTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGAACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGc                                      <  1:1095532/150‑1 (MQ=255)
                                                                                                                       cTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAagag                                                                                           <  1:1389699/91‑1 (MQ=255)
                                                                                                                        tGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAAcccc                               >  2:1086589/1‑150 (MQ=255)
                                                                                                                        tGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAACAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAAcccc                               <  1:978220/150‑1 (MQ=255)
                                                                                                                          gCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCcctc                             >  2:1099218/1‑150 (MQ=255)
                                                                                                                            ctcttcgcGGGTAAACCCGCTCCTACAATGGATTGCATAGGTGGTTGGACACAGACCGTCgtaggagc                                                                                                             >  1:1297229‑M2/4‑60 (MQ=255)
                                                                                                                            ctcttCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGc                                                                                                             >  2:1297229/4‑68 (MQ=255)
                                                                                                                             ttttCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCtt                          >  1:1089724/1‑150 (MQ=255)
                                                                                                                             taggagcgGGTTTACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCtt                          >  1:853227/6‑150 (MQ=255)
                                                                                                                                tCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAg                       <  2:1232590/150‑1 (MQ=255)
                                                                                                                                  gcgGGTAAACCCGCTCCTACgacggtctgtgtcgaaccaccgatgcaatccattgtaggagcgggtttacccgcgaaaaggccagcccaggagaacgctcagcgtttacccgcccagcgctggcgcaaccattcgagatcttcgggccgg                     <  2:1343599‑M1/150‑131 (MQ=255)
                                                                                                                                  gcgGGTAAACCCGCTCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgggtttacccgcgaaaaggccagcccaggagaacgctcagcgtttacccgcccagcgctggcgcaaccattcgagatcttcgggccgg                     >  1:1895529‑M1/1‑20 (MQ=255)
                                                                                                                                  gcgGGTAAACCCGCTCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgggtttacccgcgaaaaggccagcccaggagaacgctcagcgtttacccgcccagcgctggcgcaaccattcgagatcttcgggccgg                     >  1:1753287‑M1/1‑20 (MQ=255)
                                                                                                                                  gcgGGTAAACCCGCTCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgggtttacccgcgaaaaggccagcccaggagaacgctcagcgtttacccgcccagcgctggcgcaaccattcgagatcttcgggccgg                     <  1:1161539‑M1/150‑131 (MQ=255)
                                                                                                                                  gcgGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagc                                                                                                             >  1:1691007‑M2/1‑54 (MQ=255)
                                                                                                                                  gcgGGTAAACCCACTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagcgggtttacccgcgaagaggccagtccaggagaacgctcagcgtttacccgcccagcgctggcgcaaccattcgagatcttcgggccgg                     >  1:176161‑M2/1‑54 (MQ=255)
                                                                                                                                    gggTAAACCCGCTCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgggtttacccgcgaaaaggccagcccaggagaacgctcagcgtttacccgcccagcgctggcgcaaccattc                                     >  1:814941‑M1/1‑18 (MQ=255)
                                                                                                                                    gggTAAACCCGCTCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgggtttacccgcgaaaaggccagcccaggagaacgctcagcgtttacccgcccagcgctggcgcaaccattc                                     <  2:814941‑M1/132‑115 (MQ=255)
                                                                                                                                    gggTAAACCCGCTCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgggtttacccgcgaaaaggccagcccaggagaacgc                                                                         <  2:861027‑M1/96‑79 (MQ=255)
                                                                                                                                    gggTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTaa                   <  2:1123759/150‑1 (MQ=255)
                                                                                                                                      gTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagcgggtttacccgcgaaaaggccagcccaggagaacgctcagcgtttacccgcccagc                                                     <  2:1782162‑M2/114‑65 (MQ=255)
                                                                                                                                           cccGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTAATccacca            >  1:1566156/1‑150 (MQ=255)
                                                                                                                                            ccGCTCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgggtttacccgcgaaaaggccagcccaggagaacgctcagcgtttacccgcccagcgctggcgcaaccattcgagatcttcgggccgggtcaccttta           >  1:333962‑M1/1‑10 (MQ=255)
                                                                                                                                            ccGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagcgggtttacccgcgaaaaggccagcccaggagaacgctcagcgtttacccgcccagcgctggcgcaaccattcgagatcttcgggccgggtcacctttt           <  1:1675825‑M2/150‑107 (MQ=255)
                                                                                                                                            ccGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagcgggtttacccgcgaaaaggccagcccaggagaacgctcagcgtttacccgcccagcgctggcgcaaccattcgagatcttcgggccgggtcaccttta           <  2:641591‑M2/150‑107 (MQ=255)
                                                                                                                                            ccGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCgtaggagcgggtttacccgcgaaaaggccagcccaggagaacgctcagcgttcacccgccgagcgctggcgcaaccattcgagatcttcgggccgggtcaccttta           <  2:1398655‑M2/150‑107 (MQ=255)
                                                                                                                                            ccGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTAATCCACCAg           >  2:742787/1‑150 (MQ=255)
                                                                                                                                            ccGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTAATCCACCAg           >  2:477576/1‑150 (MQ=255)
                                                                                                                                            ccGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTAATCCACCAg           >  1:53574/1‑150 (MQ=255)
                                                                                                                                              gCTCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgggtttacccgcgaaaaggccagcccaggagaacgctcagcgtttacccgcccagcgctggcgcaaccattcgagatct                              >  1:1155309‑M1/1‑8 (MQ=255)
                                                                                                                                              gCTCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgggtttacccgcgaaaaggccagcccaggagaacgctcagcgtttacccgcccagcgctggcgcaaccattcgagatct                              >  1:201883‑M1/1‑8 (MQ=255)
                                                                                                                                              gCTCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgggtttacccgcgaaaaggccagcccaggagaacgctcagcgtttacccgaccagcgctggcgcaaccattcgagatcttcgggccgggtcacctttatg         <  2:1505694‑M1/150‑143 (MQ=255)
                                                                                                                                              gCTCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgggtttacccgc                                                                                                 <  2:1691007‑M1/62‑55 (MQ=255)
                                                                                                                                              cctCCTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgggtttacccgcgaaaaggccagcccaggagaacgctcagcgtttacccgcccagcgctggcgcaaccattcgagatcttcgggccgggtcacctttatg         <  2:1915710‑M1/149‑143 (MQ=255)
                                                                                                                                                 ccTACgacggtctgtgtccaaccaccgatgcaatccattgtaggagcgggtttgcccgcgaaaaggccagcccaggagaacgctcagcgtttacccgcccagcactggcgcaaccattcgagatcttcgggccgggtcacctttatgttg      <  1:92694‑M1/150‑146 (MQ=255)
                                                                                                                                                 ccTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTAATCCACCAgccgcc      <  1:1440825/150‑1 (MQ=255)
                                                                                                                                                     cAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTATCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTAATCCACCAGCCGCCGTAc  >  2:722994/1‑150 (MQ=255)
                                                                                                                                                     cAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTAATCCACCAGCCGCCGTAc  <  2:202258/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GTCCGGTCAGGCGCCGCGGCTGGTGGAAGGGCGCAGTGACAACATAAAGGTGACCCGGCCCGAAGATCTCGAATGGTTGCGCCAGCGCTGGGCGGGTAAACGCTGAGCGTTCTCCTGGGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACAATGGATTGCATCGGTGGTTGGACACAGACCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACCAGCAGCACATCCCGTCAGCCGAAACGATACTCCGGCAACCCCGCCAACCCCTCCTTCAGGTAATCCACCAGCCGCCGTAC  >  NC_002947/1811330‑1811628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.