BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5012886	74 (0.990)	6 (0.090)	5/232	NT	7.8%	intergenic (‑200/‑342)	PP_5677/PP_5678	hypothetical protein/hypothetical protein
*	?	NC_002947	= 5012897	74 (1.090)	6 (0.090)	5/232	NT	7.8%	intergenic (‑211/‑331)	PP_5677/PP_5678	hypothetical protein/hypothetical protein

Only 100 of 127 total aligned reads displayed.

TGGCGTGAACCGAGCCACCTTTCGGCGTCTCGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCTTGTTACCCCCAGGAGAGAAATAGCCATGAGATCAGCACC  >  NC_002947/5012738‑5013035

tGGCGTGAACAGAGCCGCCTTTCGGCGTCTCGGCCCTTCTGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTAGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATGGCCCTTAAAAtt                                                                                                                                                      >  2:1058883/1‑150 (MQ=39)

 ggCGTGAACCGAGCCACCTTTCGGCGTCTCGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTg                                                                                                                                                     <  1:725552/150‑1 (MQ=255)

 ggCGTGAACCGAGCCACCTTTCGGCGTCTCGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTg                                                                                                                                                     <  2:1112835/150‑1 (MQ=255)

 ggCGTGAACCGAGCCACCTTTCGGCGTCTCGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTg                                                                                                                                                     <  1:1245243/150‑1 (MQ=255)

  gCGTGAACCGAGCCACCTTTCGGCGTCTCGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTgg                                                                                                                                                    <  2:1077782/150‑1 (MQ=255)

  gCGTGAACCGAGCCACCTTTCGGCGTCTCGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTgg                                                                                                                                                    <  2:156217/150‑1 (MQ=255)

  gCGTGAACCGAGCCACCTTTCGGCGTCTCGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTgg                                                                                                                                                    <  1:1274855/150‑1 (MQ=255)

  gCGTGAACCGAGCCACCTTTCGGCGTCTCGGCCCTTCGGGCTTACCTTCGCCCTGGGTCTCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTgg                                                                                                                                                    <  2:529189/150‑1 (MQ=255)

   cGTGAACCGAGCCACCTTTCGGCGTCTCGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTggg                                                                                                                                                   <  2:1170810/150‑1 (MQ=255)

           gAGCCACCTTTCGGCGTCTCGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCa                                                                                                                                           >  1:573581‑M2/1‑149 (MQ=255)

              ccACCTTTCGGCGTCTCGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCattt                                                                                                                                        >  2:434030‑M2/1‑146 (MQ=255)

               cACCTTTCGGCGTCTCGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCatttt                                                                                                                                       <  2:676990‑M2/150‑6 (MQ=255)

                 ccTTTCGGCGTCTCGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCattttaa                                                                                                                                     >  1:640634‑M2/1‑143 (MQ=255)

                  cTTTCGGCGTCTCGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCattttaag                                                                                                                                    <  1:300712‑M2/150‑9 (MQ=255)

                   tttCGGCGTCTCGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCattttaagg                                                                                                                                   <  1:1718445‑M2/150‑10 (MQ=255)

                        gCGTCTCGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATg                                                                                                                              <  1:1120104/150‑1 (MQ=255)

                             tcGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCtt                                                                                                                         <  2:744489/150‑1 (MQ=255)

                               ggCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTaa                                                                                                                       <  1:1008703/150‑1 (MQ=255)

                               ggCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTaa                                                                                                                       <  2:297733/150‑1 (MQ=255)

                               ggCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTaa                                                                                                                       >  1:1024537/1‑150 (MQ=255)

                                gCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTNCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACATGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAAc                                                                                                                      >  1:1540051/1‑150 (MQ=255)

                                   cTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCATCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATGTTAAGCGCATGCACTTAACAtc                                                                                                                   >  2:136560/1‑149 (MQ=255)

                                    ttCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCattttaaggg                                                                                                                                  >  2:1490995‑M2/1‑124 (MQ=255)

                                       gggCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCNTCCATGNCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGa                                                                                                               >  1:1544945/1‑150 (MQ=255)

                                       gggCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGCGGTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGa                                                                                                               <  1:119105/150‑1 (MQ=255)

                                        ggCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGAt                                                                                                              >  2:1920117/1‑150 (MQ=255)

                                        ggCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGAt                                                                                                              <  2:1504020/150‑1 (MQ=255)

                                             tCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTaaa                                                                                                         <  2:1881113/150‑1 (MQ=255)

                                              cATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAAt                                                                                                        <  1:76189/150‑1 (MQ=255)

                                              cATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAAt                                                                                                        <  2:833732/150‑1 (MQ=255)

                                               aTCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGa                                                                                                               >  1:344128/1‑142 (MQ=255)

                                               aTCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGa                                                                                                               <  2:344128/142‑1 (MQ=255)

                                                   tCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGTGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGata                                                                                                   >  2:531202/1‑150 (MQ=255)

                                                        ccTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATgggagtgcccaattttaa                                                                                                                                     >  1:1122016‑M1/1‑93 (MQ=255)

                                                             gcgcTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGaa                                                                                         >  2:1855228/1‑150 (MQ=255)

                                                               gcTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAAtt                                                                                                                                                      >  1:1024025/1‑87 (MQ=255)

                                                               gcTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAAtt                                                                                                                                                      <  2:1024025/87‑1 (MQ=255)

                                                                  ctGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGACATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTc                                                                                    <  1:1556256/150‑1 (MQ=255)

                                                                    gCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCct                                                                                  >  1:1765650/1‑150 (MQ=255)

                                                                     cTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAAtt                                                                                                       <  2:1722124/128‑1 (MQ=255)

                                                                     cTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAAtt                                                                                                       >  1:1722124/1‑128 (MQ=255)

                                                                      ttGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCctct                                                                                >  1:1529549/1‑150 (MQ=255)

                                                                      ttGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCctct                                                                                >  2:492817/1‑150 (MQ=255)

                                                                         ccTAGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGACATCTTAATGTTGATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGc                                                                             <  1:1058883/150‑1 (MQ=255)

                                                                           tCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGATATGAGCAACACATTTCATCGGAAACCCCGTTAATAGCGTTCACTCCCATTTTAAGGGCATGCCCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCtt                                                                           >  1:35686/1‑150 (MQ=255)

                                                                             gCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCAt                                                                                                                               <  1:857958/96‑1 (MQ=255)

                                                                             gCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCAt                                                                                                                               >  2:857958/1‑96 (MQ=255)

                                                                               aTCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAAtttt                                                                                     >  1:840336/1‑136 (MQ=255)

                                                                                 ccATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGa                                                                     <  2:1024537/150‑1 (MQ=255)

                                                                                  cATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAGATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGAc                                                                    <  2:372980/150‑1 (MQ=255)

                                                                                  cATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGAc                                                                    <  1:676990/150‑1 (MQ=255)

                                                                                  cATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGAc                                                                    >  2:442823/1‑150 (MQ=255)

                                                                                   aTGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTgg                                                                                                                                                    >  2:357069/1‑69 (MQ=255)

                                                                                   aTGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTgg                                                                                                                                                    <  1:357069/69‑1 (MQ=255)

                                                                                     gTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGa                                                                     >  1:1683880/1‑146 (MQ=255)

                                                                                      tCAGCATATCAGCTTCAGGAGTTCGACATGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACt                                                                >  2:516501/1‑150 (MQ=255)

                                                                                        aGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTTGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTcc                                                              >  1:42590/1‑150 (MQ=255)

                                                                                        aGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGctc                                                                                                                           <  1:1427709/89‑1 (MQ=255)

                                                                                             atCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGt                                                         >  1:909021/1‑150 (MQ=255)

                                                                                             atCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGt                                                         >  2:1008903/1‑150 (MQ=255)

                                                                                               cAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATgggagtgcccaatttta                                                                                                                                      <  1:885353‑M1/71‑18 (MQ=255)

                                                                                               cAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATgggagtgcccaatttta                                                                                                                                      >  2:885353‑M1/1‑54 (MQ=255)

                                                                                                   ttCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGt                                                   >  1:1345853/1‑150 (MQ=255)

                                                                                                         aGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCAt                                             <  1:1920117/150‑1 (MQ=255)

                                                                                                          gTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGTTCTTTACATACCGATTTAATTTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTGATGGTCTTCAtt                                            >  1:134010/1‑150 (MQ=255)

                                                                                                          gTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCAtt                                            <  1:461915/150‑1 (MQ=255)

                                                                                                              ggccTGGGTGATGGCACTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCtt                                        <  2:1047978/148‑1 (MQ=255)

                                                                                                              gACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCtt                                        >  2:134553/1‑150 (MQ=255)

                                                                                                              gACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCtt                                        <  2:1544945/150‑1 (MQ=255)

                                                                                                               aCCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATgggagtgcccaattttaa                                                                                                                                     >  2:1666456‑M1/1‑38 (MQ=255)

                                                                                                               aCCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATgggagtgcccaattttaa                                                                                                                                     <  1:1666456‑M1/56‑19 (MQ=255)

                                                                                                                      cGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCTTGTTAcccc                                <  2:35686/150‑1 (MQ=255)

                                                                                                                      cGATTGCTCTCTAAGAAATCGCCCTTAAAATTAGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCTTGTTAcccc                                >  1:1413342/1‑150 (MQ=255)

                                                                                                                         ttGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCTTGTTACCCCCAg                             <  2:198285/150‑1 (MQ=255)

                                                                                                                             tctntAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCTTGTTACCCCCAGgaga                         >  2:1188113/1‑150 (MQ=255)

                                                                                                                             tctctAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCTTGTTACCCCCAGgaga                         <  2:1345853/150‑1 (MQ=255)

                                                                                                                               tctAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCTTGTTACCCCCAGgagaga                       >  1:1444570/1‑150 (MQ=255)

                                                                                                                                 tAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCTTGTTACCCCCAGGAGAGaaa                     >  1:1750992/1‑150 (MQ=255)

                                                                                                                                 tAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCTTGTTACCCCCAGGAGAGaaa                     >  1:1127026/1‑150 (MQ=255)

                                                                                                                                           cccTTAAAATgggagtgcccaattttaagggcgatttcttagagagcaatcgcccaggtcgaactcctgaagctgatatgctgacatggatgcgaggcaagcagagcgcgcaggcgcgaggatgaaagcccgaa                           >  2:1490995‑M1/1‑10 (MQ=255)

                                                                                                                                           cccTTAAAATgggagtgcccaattttaagggcgatttcttagagagcaatcgcccaggtcgaactcctgaagctgatatgctgacatggatgcgaggcaagcagagcgcgcaggcgcgaggatgaaagcccgaa                           <  1:1490995‑M1/134‑125 (MQ=255)

                                                                                                                                           cccTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCTTGTTACCCCCAGGAGAGAAATAGCCATgag           >  1:1202162/1‑150 (MQ=255)

                                                                                                                                             cTTAAAATgggagtgcccaattttaagggcgatttcttagagagcaatcgcccaggtcgaactcctgaagctgatatgctgacatggatgcgaggcaagcagagcgcgcaggcgcgaggatgaaagcccgaagggccgagacgccgaaag         <  1:300712‑M1/150‑143 (MQ=255)

                                                                                                                                              ttAAAATgggagtgcccaattttaagggcgatttcttagagagcaatcgcccaggtcgaactcctgaagctgatatgctgacatggatgcgaggcaagcagagcgcgcaggcgcgaggatgaaagcccgaagggccgagacgccgaaagg        >  1:640634‑M1/1‑7 (MQ=255)

                                                                                                                                              ttAAAATgggagtgcccaattttaagggcgatctcttagagagcaatcgcccaggtcgaactcctgaagctgatatgctgacatggatgcgaggcaagcagagcgcgcaggcgcgaggatgaaagcccgaagggccgagacgccgaaagg        <  1:372980‑M1/150‑144 (MQ=255)

                                                                                                                                              ttAAAATTGGGCACTCCCattttaagggcgatttcttagagagcaatcgcccaggtcgaactcctgaagctgatatgctgacatggatgcgaggcaagcagagcgcgcagg                                               >  1:1122016‑M2/1‑18 (MQ=255)

                                                                                                                                              ttAAAATTGGGCACTCCCattttaagggcgatttcttagagagcaatcgcccaggtcgaactcctgaagctgatatgctgacatggatgcgaggcaagcagagcgcgcagg                                               <  2:1122016‑M2/111‑94 (MQ=255)

                                                                                                                                              ttAAAATTGGGCACTCCCattttaagggcgatttcttagagagcaatcgcccaggt                                                                                                      <  1:1666456‑M2/56‑39 (MQ=255)

                                                                                                                                              ttAAAATTGGGCACTCCCattttaagggcgatttcttagagagcaatcgcccaggt                                                                                                      >  2:1666456‑M2/1‑18 (MQ=255)

                                                                                                                                              ttAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCTTGTTACCCCCAGGAGAGAAATAGCCATGAGATc        <  2:1529549/150‑1 (MQ=255)

                                                                                                                                              tgaaaaTTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCTTGTTACCCCCAGGAGAGAAATAGCCATGAGATc        >  2:1762261/3‑150 (MQ=255)

                                                                                                                                               tAAAATgggagtgcccaattttaagggcgatttcttagagagcaatcgcccaggtcgaactcctgaagctgatatgctgacatggatgcgaggcaagcagagcgcgcaggcgcgaggatgaaagcccgaagggccgagacgccgaaagca       <  1:833732‑M1/150‑145 (MQ=255)

                                                                                                                                               tAAAATTGGGCACTCCCattttaagggcgatttcttagagagcaatcgcccaggtcgaactcctgaagctg                                                                                      >  2:885353‑M2/1‑17 (MQ=255)

                                                                                                                                                aaaaTgggagtgcccaattttaagggcgatttcttagagagcaatcgcccaggtcgaactcctgaagctgatatgctgacatggatgcgaggcaagcagagcgcgcaggcgcgaggatgaaagcccgaagggccgagacgccgaaaggtg      <  2:676990‑M1/150‑146 (MQ=255)

                                                                                                                                                 aaaTgggagtgcccaattttaagggcgatttcttagagagcaatcgcccaggtcgaactcctgaagctgatatgctgacatggatgcgaggcaagcagagcgcgcaggcgcgaggatgaaagcccgaagggccgagacgccgaaaggtgg     >  2:434030‑M1/1‑4 (MQ=255)

                                                                                                                                                 aaaTgggagtgcccaattttaagggcgatttcttagagagcaatcgcccaggtcgaactcctgaagctgatatgctgacatggatgcgaggcaagcagagcgcgcaggcgcgaggatgaaagcccgaagggccgagacgccgaaaggtgg     <  1:300964‑M1/150‑147 (MQ=255)

                                                                                                                                                  aaTTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCTTGTTACCCCCAGGAGAGAAATAGCCATGAGATCAGCa    <  1:377230/150‑1 (MQ=255)

                                                                                                                                                   aTTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCTTGTTACCCCCAGga                           >  1:1344960/1‑126 (MQ=255)

                                                                                                                                                   aTTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCTTGTTACCCCCAGga                           <  2:1344960/126‑1 (MQ=255)

                                                                                                                                                    tgggagtgcccaattttaagggcgatttcttagagagcaatcgcccaggtcgaactcctgaagctgatatgctgacatggatgcgaggcaagcagagcgcgcaggcgcgaggatgaaagcccgaagggccgagacgccgaaaggtggctc  >  1:573581‑M1/1‑1 (MQ=255)

TGGCGTGAACCGAGCCACCTTTCGGCGTCTCGGCCCTTCGGGCTTTCATCCTCGCGCCTGCGCGCTCTGCTTGCCTCGCATCCATGTCAGCATATCAGCTTCAGGAGTTCGACCTGGGCGATTGCTCTCTAAGAAATCGCCCTTAAAATTGGGCACTCCCATTTTAAGGGCATGCTCTTAACATACTGATTTAAATTGATATTTCTTAGAATTTTCCTCTCGCTTCCTTGACCACTCCAGCGTCATGGTCTTCATTTCTTGTTACCCCCAGGAGAGAAATAGCCATGAGATCAGCACC  >  NC_002947/5012738‑5013035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.