New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5164490	70 (0.940)	5 (0.070)	5/244	NT	7.3%	coding (3438/3906 nt)	hrpA	ATP‑dependent helicase HrpA
	?	NC_002947	= 5164525	59 (0.820)					coding (3403/3906 nt)	hrpA	ATP‑dependent helicase HrpA

GTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAG  >  NC_002947/5164343‑5164639                                                                                                                                                    |                                                                                                                                                      gTACACCAGGTTGCCTAGCTGCTGCTGGATGTCGTTCAGTGCCACCGCTTTGCTCAGGTCGATCTTGCCCTTGAAGCGTTGCTGCAGACCATGCCACGGCTTCAGCACTACCGGGTTCTTCCTTCCCAGGCGCTCGGCATGCCCGGCCCa                                                                                                                                                     >  1:864405/1‑150 (MQ=255)     cccAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTg                                                                                                                                                 <  2:1066678/149‑1 (MQ=255)     acCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTg                                                                                                                                                 >  2:1769303/1‑150 (MQ=255)     acCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTg                                                                                                                                                 >  1:674761/1‑150 (MQ=255)          gTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCcgcg                                                                                                                                            >  1:1158412/1‑150 (MQ=255)           ttGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCgcgc                                                                                                                                           >  1:781545/1‑150 (MQ=255)               cTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGc                                                                                                                                       <  2:1158412/150‑1 (MQ=255)               cTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGc                                                                                                                                       >  2:1032562/1‑150 (MQ=255)                    tgcttctTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTAAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTca                                                                                                                                  <  2:43769/150‑1 (MQ=255)                    tgctgctTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTca                                                                                                                                  <  1:21733/150‑1 (MQ=255)                        gctTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTcagcca                                                                                                                              <  2:1866717/150‑1 (MQ=255)                         ctTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTcagccag                                                                                                                             >  1:89437/1‑150 (MQ=255)                            gATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAgcgc                                                                                                                          >  1:1130992/1‑150 (MQ=255)                              tGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCgg                                                                                                                        <  2:1405380/150‑1 (MQ=255)                              tGTCGTACAGTGCCACCGCTTGGCTCAGGTCGATATTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTACCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCCCGGCCCAGCTGCCGCGCTTGCGTTCAGCCCGCGCgg                                                                                                                        >  2:1341714/1‑150 (MQ=255)                               gTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGc                                                                                                                       >  1:1043784/1‑150 (MQ=255)                               gTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGc                                                                                                                       >  1:1310195/1‑150 (MQ=255)                                tCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGcc                                                                                                                      >  1:399424/1‑150 (MQ=255)                                 cGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCcagccgccgcgctggctgaacgcaagcgcggcag                                                                                                                     <  1:473838‑M1/150‑35 (MQ=255)                                  gTTCAGTGGCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCaa                                                                                                                    <  2:1043784/150‑1 (MQ=255)                                  gTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCaa                                                                                                                    >  1:483822/1‑150 (MQ=255)                                    tCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAgg                                                                                                                  >  2:1587746‑M2/1‑148 (MQ=255)                                         gCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCa                                                                                                             <  2:483822/150‑1 (MQ=255)                                          ccACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGATGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCAc                                                                                                            >  1:1149023/1‑150 (MQ=255)                                            aCCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCt                                                                                                          >  1:732605/1‑150 (MQ=255)                                            aCCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCt                                                                                                          >  1:583309/1‑150 (MQ=255)                                              cGCTTGGCTCAGGTCGATCTTGCCATTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCCTGCTCGATCCAGCTTCCGCACTTTCTTTCAGCCATCTCTGCCAAGTCCGCACCTTc                                                                                                        <  2:960916/150‑1 (MQ=255)                                                cTTGGCTCAGGTCGATCTTGCCCTTGACGCGTTTCTGGAGGCCAGGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCAc                                                                                                      <  2:781545/150‑1 (MQ=255)                                                   ggCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTg                                                                                                   <  1:565099/150‑1 (MQ=255)                                                    gCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGTGGCCAAGGCCGCACCTTCACGTgg                                                                                                  <  2:1288292/150‑1 (MQ=255)                                                    gCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTgg                                                                                                  <  2:1777029/150‑1 (MQ=255)                                                      tCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCa                                                                                                >  1:1184919/1‑150 (MQ=255)                                                         ggTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACg                                                                                             <  1:1475363/150‑1 (MQ=255)                                                          gTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACgg                                                                                            >  1:255260/1‑150 (MQ=255)                                                          gTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACgg                                                                                            >  1:107636/1‑150 (MQ=255)                                                           tCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGgt                                                                                           >  2:334496/1‑150 (MQ=255)                                                               tCTTGCCCTTGAGGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGCCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGgttgtt                                                                                       <  2:642351/150‑1 (MQ=255)                                                               tCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCttggccgcgctggctgaacgcaagcgcggcagctgggccgag                                                                                                             >  1:1182183‑M1/1‑86 (MQ=255)                                                               tCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCttggccgcgctggctgaacgcaagcgcggcagctgggccgag                                                                                                             <  2:1182183‑M1/128‑43 (MQ=255)                                                               tCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGgttgtt                                                                                       >  2:907134/1‑150 (MQ=255)                                                                cTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTc                                                                                      <  2:674761/150‑1 (MQ=255)                                                                 ttGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCg                                                                                     >  1:532599/1‑150 (MQ=255)                                                                 ttGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCg                                                                                     >  2:770475/1‑150 (MQ=255)                                                                    cccTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCt                                                                                  <  1:382560/150‑1 (MQ=255)                                                                     ccTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCttggccgcgctggctgaacgcaagcgcggcagctgggccga                                                                                                              >  1:1252637‑M1/1‑80 (MQ=255)                                                                     ccTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCttggccgcgctggctgaacgcaagcgcggcagctgggccga                                                                                                              <  2:1252637‑M1/121‑42 (MQ=255)                                                                     ccTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCtt                                                                                 >  1:313771/1‑150 (MQ=255)                                                                           aGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGa                                                                           >  1:369194/1‑150 (MQ=255)                                                                              gTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGc                                                                        <  2:842084/150‑1 (MQ=255)                                                                                   tGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTg                                                                   >  2:506763/1‑150 (MQ=255)                                                                                    gCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGt                                                                  >  1:729524/1‑150 (MQ=255)                                                                                     cAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTc                                                                 <  2:1238653/150‑1 (MQ=255)                                                                                       gACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCa                                                               >  2:1125910/1‑150 (MQ=255)                                                                                          cATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAgg                                                                                                                  >  1:1259316‑M2/1‑94 (MQ=255)                                                                                          cATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAgg                                                                                                                  <  2:1259316‑M2/96‑3 (MQ=255)                                                                                            tGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTg                                                          <  1:749752/150‑1 (MQ=255)                                                                                              ccACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGc                                                        >  1:175212/1‑150 (MQ=255)                                                                                               cacaGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCa                                                                                                                                                     <  2:238349/56‑1 (MQ=255)                                                                                               cacaGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCa                                                                                                                                                     >  1:238349/1‑56 (MQ=255)                                                                                                acaGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAgcgc                                                                                                                          <  2:1746353/82‑1 (MQ=255)                                                                                                acaGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAgcgc                                                                                                                          >  1:1746353/1‑82 (MQ=255)                                                                                                acaGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCca                                                      >  2:1274293/1‑150 (MQ=255)                                                                                                acaGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCca                                                      >  2:1274335/1‑150 (MQ=255)                                                                                                     ttCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGa                                                 >  1:295776/1‑150 (MQ=255)                                                                                                      tCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGgt                                                                                           <  2:1101752/107‑1 (MQ=255)                                                                                                      tCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGgt                                                                                           >  1:1101752/1‑107 (MQ=255)                                                                                                      tCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGaa                                                <  2:107636/150‑1 (MQ=255)                                                                                                      tCAGCACTTCCAGGGTCTCCCTCGCAAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGaa                                                <  2:1154381/150‑1 (MQ=255)                                                                                                       cAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCAAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCACGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAAt                                               <  2:399424/150‑1 (MQ=255)                                                                                                          cACTTCCAGGGTTTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGGGGCAACGGTTGTTCGCCTTCAAGGCTGCAACTGTCCAGGCTGGCCAGCAGAATGTc                                            <  1:1781655/150‑1 (MQ=255)                                                                                                             ttCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTc                                         >  2:1530372/1‑150 (MQ=255)                                                                                                                 aGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGcc                                                                                   <  2:728261/104‑1 (MQ=255)                                                                                                                 aGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGcc                                                                                   >  1:728261/1‑104 (MQ=255)                                                                                                                  gggTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCa                                    <  2:532599/150‑1 (MQ=255)                                                                                                                        gCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCtt                              >  2:819586/1‑150 (MQ=255)                                                                                                                        gCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCtt                              <  2:1395944/150‑1 (MQ=255)                                                                                                                          cTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCt                            >  2:246964/1‑150 (MQ=255)                                                                                                                          cTTGCCAGGCGCTAGGCATGCTCGTGCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCt                            <  1:1341714/150‑1 (MQ=255)                                                                                                                                     cTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCAt                 <  1:203780/150‑1 (MQ=255)                                                                                                                                        ggCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTc              <  2:1184919/150‑1 (MQ=255)                                                                                                                                          cATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCAc            <  1:1032562/150‑1 (MQ=255)                                                                                                                                              cTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagggcaaga                              >  1:1182183‑M2/1‑42 (MQ=255)                                                                                                                                              cTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagggcaaga                              <  2:1182183‑M2/128‑87 (MQ=255)                                                                                                                                               tCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagg                                    >  1:1252637‑M2/1‑41 (MQ=255)                                                                                                                                               tCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagg                                    <  2:1252637‑M2/121‑81 (MQ=255)                                                                                                                                                 ggCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTAcag     <  2:89437/150‑1 (MQ=255)                                                                                                                                                   ccttggccgcgctggctgaacgcaagcgcggcagctgggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagggcaagatcgacctgagccaagcggtggcactga   >  2:1587746‑M1/1‑2 (MQ=255)                                                                                                                                                   ccttggccgcgctggctgaacgcaagcgcggcagctgggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatg                                                         >  1:1259316‑M1/1‑2 (MQ=255)                                                                                                                                                   ccttggccgcgctggctgaacgcaagcgcggcagctgggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatg                                                         <  2:1259316‑M1/96‑95 (MQ=255)                                                                                                                                                    ccAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTAcagcag  <  2:1130992/150‑1 (MQ=255)                                                                                                                                                    ccAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTAcagcag  <  1:1769303/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      GTACACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCCAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAG  >  NC_002947/5164343‑5164639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.