New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5164490	70 (0.940)	5 (0.070)	5/244	NT	7.3%	coding (3438/3906 nt)	hrpA	ATP‑dependent helicase HrpA
	?	NC_002947	= 5164525	59 (0.820)					coding (3403/3906 nt)	hrpA	ATP‑dependent helicase HrpA

GTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCGGTCAGCCCCGGCAGCTTGCCGCGCA  >  NC_002947/5164376‑5164674                                                                                                                                                        |                                                                                                                                                      gTTCAGTGGCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑Caa                                                                                                                                                       <  2:1043784/150‑1 (MQ=255) gTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑Caa                                                                                                                                                       >  1:483822/1‑150 (MQ=255)   tCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAgg                                                                                                                                                     >  2:1587746‑M2/1‑148 (MQ=255)        gCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCa                                                                                                                                                <  2:483822/150‑1 (MQ=255)         ccACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGATGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCAc                                                                                                                                               >  1:1149023/1‑150 (MQ=255)           aCCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCt                                                                                                                                             >  1:732605/1‑150 (MQ=255)           aCCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCt                                                                                                                                             >  1:583309/1‑150 (MQ=255)             cGCTTGGCTCAGGTCGATCTTGCCATTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCCTGCTCGATCCAGCTTCCGCACTTTCTTTCAGCCATCTCTGC‑‑CAAGTCCGCACCTTc                                                                                                                                           <  2:960916/150‑1 (MQ=255)               cTTGGCTCAGGTCGATCTTGCCCTTGACGCGTTTCTGGAGGCCAGGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCAc                                                                                                                                         <  2:781545/150‑1 (MQ=255)                  ggCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTg                                                                                                                                      <  1:565099/150‑1 (MQ=255)                   gCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGTGGC‑‑CAAGGCCGCACCTTCACGTgg                                                                                                                                     <  2:1288292/150‑1 (MQ=255)                   gCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTgg                                                                                                                                     <  2:1777029/150‑1 (MQ=255)                     tCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCa                                                                                                                                   >  1:1184919/1‑150 (MQ=255)                        ggTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACg                                                                                                                                <  1:1475363/150‑1 (MQ=255)                         gTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACgg                                                                                                                               >  1:107636/1‑150 (MQ=255)                         gTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACgg                                                                                                                               >  1:255260/1‑150 (MQ=255)                          tCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGgt                                                                                                                              >  2:334496/1‑150 (MQ=255)                              tCTTGCCCTTGAGGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGCCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGgttgtt                                                                                                                          <  2:642351/150‑1 (MQ=255)                              tCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGgttgtt                                                                                                                          >  2:907134/1‑150 (MQ=255)                               cTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTc                                                                                                                         <  2:674761/150‑1 (MQ=255)                                ttGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCg                                                                                                                        >  2:770475/1‑150 (MQ=255)                                ttGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCg                                                                                                                        >  1:532599/1‑150 (MQ=255)                                   cccTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCt                                                                                                                     <  1:382560/150‑1 (MQ=255)                                    ccTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCtt                                                                                                                    >  1:313771/1‑150 (MQ=255)                                          aGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGa                                                                                                              >  1:369194/1‑150 (MQ=255)                                             gTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGc                                                                                                           <  2:842084/150‑1 (MQ=255)                                                  tGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTg                                                                                                      >  2:506763/1‑150 (MQ=255)                                                   gCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGt                                                                                                     >  1:729524/1‑150 (MQ=255)                                                    cAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTc                                                                                                    <  2:1238653/150‑1 (MQ=255)                                                      gACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCa                                                                                                  >  2:1125910/1‑150 (MQ=255)                                                         cATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAgg                                                                                                                                                     <  2:1259316‑M2/96‑3 (MQ=255)                                                         cATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAgg                                                                                                                                                     >  1:1259316‑M2/1‑94 (MQ=255)                                                           tGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTg                                                                                             <  1:749752/150‑1 (MQ=255)                                                             ccACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGc                                                                                           >  1:175212/1‑150 (MQ=255)                                                               acaGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCca                                                                                         >  2:1274335/1‑150 (MQ=255)                                                               acaGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCca                                                                                         >  2:1274293/1‑150 (MQ=255)                                                                    ttCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGa                                                                                    >  1:295776/1‑150 (MQ=255)                                                                     tCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGgt                                                                                                                              <  2:1101752/107‑1 (MQ=255)                                                                     tCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGgt                                                                                                                              >  1:1101752/1‑107 (MQ=255)                                                                     tCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGaa                                                                                   <  2:107636/150‑1 (MQ=255)                                                                     tCAGCACTTCCAGGGTCTCCCTCGCAAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGaa                                                                                   <  2:1154381/150‑1 (MQ=255)                                                                      cAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCAAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CACGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAAt                                                                                  <  2:399424/150‑1 (MQ=255)                                                                         cACTTCCAGGGTTTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGGGGCAACGGTTGTTCGCCTTCAAGGCTGCAACTGTCCAGGCTGGCCAGCAGAATGTc                                                                               <  1:1781655/150‑1 (MQ=255)                                                                            ttCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTc                                                                            >  2:1530372/1‑150 (MQ=255)                                                                                aGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGcc                                                                                                                      <  2:728261/104‑1 (MQ=255)                                                                                aGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGcc                                                                                                                      >  1:728261/1‑104 (MQ=255)                                                                                 gggTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCa                                                                       <  2:532599/150‑1 (MQ=255)                                                                                       gCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCtt                                                                 <  2:1395944/150‑1 (MQ=255)                                                                                       gCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCtt                                                                 >  2:819586/1‑150 (MQ=255)                                                                                         cTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCt                                                               >  2:246964/1‑150 (MQ=255)                                                                                         cTTGCCAGGCGCTAGGCATGCTCGTGCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCt                                                               <  1:1341714/150‑1 (MQ=255)                                                                                                    cTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCAt                                                    <  1:203780/150‑1 (MQ=255)                                                                                                       ggCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTc                                                 <  2:1184919/150‑1 (MQ=255)                                                                                                         cATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCAc                                               <  1:1032562/150‑1 (MQ=255)                                                                                                             cTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagggcaaga                                                                 >  1:1182183‑M2/1‑42 (MQ=255)                                                                                                             cTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagggcaaga                                                                 <  2:1182183‑M2/128‑87 (MQ=255)                                                                                                              tCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagg                                                                       >  1:1252637‑M2/1‑41 (MQ=255)                                                                                                              tCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagg                                                                       <  2:1252637‑M2/121‑81 (MQ=255)                                                                                                                ggCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTAcag                                        <  2:89437/150‑1 (MQ=255)                                                                                                                   ccAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTAcagcag                                     <  2:1130992/150‑1 (MQ=255)                                                                                                                   ccAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTAcagcag                                     <  1:1769303/150‑1 (MQ=255)                                                                                                                       cTGCCGCGCTTGCGTTCAGCCAGCGCGGCGGCTGggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagggcaagatcgacctgagccaagcggtggcactgaacg                                   <  1:473838‑M2/150‑117 (MQ=255)                                                                                                                           cgcgCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATAAAAGGGTTAAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCt                             >  1:1176485/1‑150 (MQ=255)                                                                                                                            gcgcTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACgg                                             <  2:23675/133‑1 (MQ=255)                                                                                                                            gcgcTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACgg                                             >  1:23675/1‑133 (MQ=255)                                                                                                                             cgcTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCg                           <  2:1149023/150‑1 (MQ=255)                                                                                                                             cgcTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTCCACGTTACAGCAGGCCCAGCTCg                           <  2:369194/150‑1 (MQ=255)                                                                                                                                    gTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCGGTCAGcc                    >  1:72499/1‑150 (MQ=255)                                                                                                                                       cagccagcGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCGGTCAGCCCCg                 <  2:1064037/150‑1 (MQ=255)                                                                                                                                          ccagcGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCGATATCACGGTACAGCAGGCCCAGCTCGGTCAGCCCCGGCa              >  1:1533826/1‑150 (MQ=255)                                                                                                                                          ccagcGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCGGTCAGCCCCGGCa              >  1:839339/1‑150 (MQ=255)                                                                                                                                          ccagcGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCGGTCAGCCCCGGCa              >  1:619202/1‑150 (MQ=255)                                                                                                                                           cagcGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGCCCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCGGTCAGCCGCGTCAg             >  2:33491/1‑150 (MQ=255)                                                                                                                                                        aGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCGGTCAGCCCCGGCAGCTTGCCGCGCa  <  1:770475/150‑1 (MQ=255)                                                                                                                                                        aGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCGGTCAGCCCCGGCAGCTTGCCGCGCa  <  2:1583820/150‑1 (MQ=255)                                                                                                                                                        |                                                                                                                                                      GTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGTCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCGGTCAGCCCCGGCAGCTTGCCGCGCA  >  NC_002947/5164376‑5164674

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.