New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4290153 =	87 (1.170)	6 (0.080)	4/246	NT	7.6%	coding (2478/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4290201 =	61 (0.840)					coding (2430/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator

CATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCAGAATGCAGCGGGTATC  >  NC_002947/4290053‑4290350                                                                                                                                                     |                                                                                                                                                      cATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGa                                                                                                                                                      <  2:774505/150‑1 (MQ=255)   tACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATc                                                                                                                                                    >  1:182282/1‑150 (MQ=255)      cccACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGAGGGAGGGCAGGGGCATGTCCAGCAGGATCGCa                                                                                                                                                 >  1:634052/1‑150 (MQ=255)      cccACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGAAGCGTGCCTGCTCCTTGAGGAGCTGCCGGACAGTGAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCa                                                                                                                                                 >  1:890857/1‑150 (MQ=255)              ccccATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAAt                                                                                                                                         <  1:460153/150‑1 (MQ=255)                ccATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGt                                                                                                                                       >  1:1171276/1‑150 (MQ=255)                 cATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGGCGGGCAGGCGCATGTACAGCAGGATCGCATCCAGCATGTa                                                                                                                                      >  1:843256/1‑150 (MQ=255)                      gCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCGGGATCGCATCCGGAATGTACTggg                                                                                                                                 <  2:1286488/150‑1 (MQ=255)                       cATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGAGCCAGGGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGc                                                                                                                                >  1:1771133/1‑150 (MQ=255)                            ccgccTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCCGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGgccgccc                                                                                                                           >  2:132907/1‑149 (MQ=255)                                 tCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCa                                                                                                                                                 <  2:216515/123‑1 (MQ=255)                                 tCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCa                                                                                                                                                 >  1:216515/1‑123 (MQ=255)                                      gcgGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGcc                                                                                                                 <  1:973875/150‑1 (MQ=255)                                        ggTCTTCCACCGAAATGATGTGTATCGGGACATGGCGGGTGCTGGCCTGAACTTTGAGGAGCTCCAGGACAGTCAGGCCCGAGTGGTCGGGGAGGCGCAGGTTTCGCAGGATCGCATGCTGAATATACTAAGCTGGCATGTCTAAGTCtt                                                                                                               >  2:870201/1‑150 (MQ=255)                                        ggTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCtt                                                                                                               >  1:1191754/1‑150 (MQ=255)                                         gTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGTGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCCGGATCGCATCCGGAATGTACTTGGCTTCCAGCTCGAAGCATtc                                                                                                              <  2:691101/150‑1 (MQ=255)                                            ttCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTtcgtc                                                                                                           >  2:541133/1‑150 (MQ=255)                                                aCCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGgcg                                                                                                       >  1:188529/1‑150 (MQ=255)                                                 ccGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGAAAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGgcgc                                                                                                      >  2:1600401/1‑150 (MQ=255)                                                              cACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCTCTGCAGTACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCCGCGCCATGGGCCACCAg                                                                                         <  1:123907/150‑1 (MQ=255)                                                              cACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGTAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAg                                                                                         <  2:1113099/150‑1 (MQ=255)                                                               aCCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACt                                                                                                                                    <  2:569552/106‑1 (MQ=255)                                                               aCCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACt                                                                                                                                    >  1:569552/1‑106 (MQ=255)                                                                 cGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCANGCa                                                                                      <  2:1191754/150‑1 (MQ=255)                                                                  gggATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAg                                                                                     <  1:1777925/150‑1 (MQ=255)                                                                     atatGGCGGGTGCTGGCCTGCTCCTTGGAGCGCTGCAGGACAGTCAGGCCCGGGTGGTCTGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATTGGCCCCCAGGCCGCta                                                                                  >  2:452616/1‑150 (MQ=255)                                                                          gCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCGGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGcc                                                                             >  2:345453/1‑150 (MQ=255)                                                                          gCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGcc                                                                             <  2:909731/150‑1 (MQ=255)                                                                           cGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGccc                                                                            >  2:192934/1‑150 (MQ=255)                                                                            gggTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCa                                                                           >  2:1830579/1‑150 (MQ=255)                                                                            gggTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCa                                                                           <  2:1171276/150‑1 (MQ=255)                                                                                   ggCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATg                                                                    >  2:875402/1‑150 (MQ=255)                                                                                    gCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATgg                                                                   <  1:1088870/150‑1 (MQ=255)                                                                                    gCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATgg                                                                   <  1:1272357/150‑1 (MQ=255)                                                                                    gCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGGCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGGAAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATgg                                                                   >  1:1456466/1‑150 (MQ=255)                                                                                      cTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGc                                                                 >  2:279664/1‑150 (MQ=255)                                                                                       tGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGcc                                                                >  2:372183/1‑150 (MQ=255)                                                                                        gCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCa                                                               >  1:1111679/1‑150 (MQ=255)                                                                                        gCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCa                                                               >  1:1113754/1‑150 (MQ=255)                                                                                         cTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAGGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAg                                                              <  2:634052/150‑1 (MQ=255)                                                                                         cTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTtcgt                                                                                                            >  1:933039/1‑104 (MQ=255)                                                                                         cTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTtcgt                                                                                                            <  2:933039/104‑1 (MQ=255)                                                                                             ttGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCACCGATAGCCCAGCTCATGGGCCAGGTCg                                                          >  1:479892/1‑150 (MQ=255)                                                                                               gAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTtagtc                                                                                                           >  1:374002/1‑99 (MQ=255)                                                                                               gAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTtagtc                                                                                                           <  2:374002/99‑1 (MQ=255)                                                                                               gAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAgg                                                                                        >  2:388779/1‑118 (MQ=255)                                                                                               gAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAgg                                                                                        <  1:388779/118‑1 (MQ=255)                                                                                                      tgctggacatgcgcctgcccgaccactcgggcctgactgtcctgcagGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCATCTCATgg                                                                   <  2:1019600‑M2/85‑1 (MQ=255)                                                                                                      tgctggacatgcgcctgcccgaccactcgggcctgactgtcctgcagGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATgg                                                                   >  1:1019600‑M2/48‑132 (MQ=255)                                                                                                      tgctggacatgcgcctgcccgaccactcgggcctgactgtcctgcagGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATgg                                                                   <  2:1518352‑M2/85‑1 (MQ=255)                                                                                                      tgctggacatgcgcctgcccgaccactcgggcctgactgtcctgcagGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATgg                                                                   >  1:1518352‑M2/48‑132 (MQ=255)                                                                                                      TGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCa                                                                           <  2:411710‑M1/124‑1 (MQ=255)                                                                                                      TGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCa                                                                           >  1:411710‑M1/1‑124 (MQ=255)                                                                                                       gCAGGACAGGCAGGCCCGAGGGGTCGGGCAGGCGCATGCCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCATCGGCGCCCTGGGCCACCCGCCAGATATAACACATGTCATTGGCCATGTCGAGGAGGATGc                                                <  2:1456466/150‑1 (MQ=255)                                                                                                         tggacatgcgcctgcccgaccactcgggcctgactgtcctgcagGATGGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGGCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCgg                                              >  2:977450‑M2/45‑150 (MQ=255)                                                                                                         aGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCa                                                                           >  1:722669/1‑121 (MQ=255)                                                                                                         aGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCa                                                                           <  2:722669/121‑1 (MQ=255)                                                                                                         aGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGCAATGTACTTGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCTAGGTCGAAGAGGATGCgg                                              <  2:250885/150‑1 (MQ=255)                                                                                                              aGTCAGGCCCGAGTGGTCGGGCAGGCGAATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCaaa                                         <  2:117895/150‑1 (MQ=255)                                                                                                                 cAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGtt                                      <  2:182282/150‑1 (MQ=255)                                                                                                                       cGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGATTGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTc                                <  1:870201/150‑1 (MQ=255)                                                                                                                         aGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGt                              >  1:104379/1‑150 (MQ=255)                                                                                                                             gTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCACGCCGCCGTAGCCAGGATCGCGTGCCAGGTCGAAGAGGATGCGGGCACAGTTGGGCTCGTCTTc                          >  2:527654/1‑150 (MQ=255)                                                                                                                                 cgggcctgactgtcctgcagGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGAtt                      <  1:977450‑M2/130‑1 (MQ=255)                                                                                                                                  gCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCGCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTTATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGATCGTCTTCGATTa                     <  2:843256/150‑1 (MQ=255)                                                                                                                                    aGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTAcc                   <  1:372183/150‑1 (MQ=255)                                                                                                                                     ggCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCa                  <  1:467044/150‑1 (MQ=255)                                                                                                                                     ggCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCa                  <  1:541133/150‑1 (MQ=255)                                                                                                                                      gcgcATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCAg                 >  1:1765216/1‑150 (MQ=255)                                                                                                                                      gcgcATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCAg                 >  1:1856612/1‑150 (MQ=255)                                                                                                                                         cATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGATCGTCTTCGATTACCAGAAt              >  2:316842/1‑150 (MQ=255)                                                                                                                                            gTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATgg                                                                   <  2:998557/94‑1 (MQ=255)                                                                                                                                            gTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATgg                                                                   >  1:998557/1‑94 (MQ=255)                                                                                                                                            gTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCAGAATGCa           >  1:1189650/1‑150 (MQ=255)                                                                                                                                              ccAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCAGAATGCAGc         <  2:1908357/150‑1 (MQ=255)                                                                                                                                                agcagGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCTTCTTCGATTACCAGAATGCAGCgg       <  1:452616/150‑1 (MQ=255)                                                                                                                                                     gATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCAGAATGCAGCGGGTATc  <  1:1419906/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      CATACCCCACCGCCCCCATGTGCATGGCCGCCTCGACGCGGTCTTCCACCGAAATGATGTGCACCGGGATATGGCGGGTGCTGGCCTGCTCCTTGAGGCGCTGCAGGACAGTCAGGCCCGAGTGGTCGGGCAGGCGCATGTCCAGCAGGATCGCATCCGGAATGTACTGGGCTGCCAGCTCGAAGCCTTCGTCGGCGCCATGGGCCACCAGGCAGCTATAGCCCAGCTCATGGGCCAGGTCGAAGAGGATGCGGGCAAAGTTGGGCTCGTCTTCGATTACCAGAATGCAGCGGGTATC  >  NC_002947/4290053‑4290350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.