New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4393957	58 (0.780)	5 (0.070)	5/238	NT	7.7%	coding (1059/1488 nt)	PP_3869	sheath protein
	?	NC_002947	= 4393980	66 (0.940)					coding (1036/1488 nt)	PP_3869	sheath protein

GAAATTGATGATGTAGGCCGACTGATGCAGCGTCTCGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCGGGAGGCATAGCCAGCCGCTTGACGCCACA  >  NC_002947/4393831‑4394129                                                                                                                                                      |                                                                                                                                                      gAAATTGATGATGTAGGCCGACTGATGCAGCGTCTCGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGt                                                                                                                                                       >  1:386967/1‑150 (MQ=255) gAAACTGATGATGTAGGCCGACTGATTCATCGTCTCGCTGTACAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCTGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGt                                                                                                                                                       <  2:108229/150‑1 (MQ=255)  aaaTTGATGATGTAGGCCGACTGATGCAGCGTCTCGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTc                                                                                                                                                      >  1:1885068‑M2/1‑149 (MQ=255)   aaTTGATGATGTAGGCCGACTGATGCAGCGTCTCGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTca                                                                                                                                                     <  2:1832468‑M2/150‑3 (MQ=255)      tgatgaTGTAGGCCGACTGATGCAGCGTCTCGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTcagca                                                                                                                                                  >  2:1494521‑M2/1‑145 (MQ=255)       gatgatGTAGGCCGACTGATGCAGCGTCTCGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTcagtag                                                                                                                                                 >  1:833644‑M2/1‑144 (MQ=255)         tgatgTAGGCCGACTGATGCAGCGTCTCGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTcagcagcg                                                                                                                                               >  2:902951‑M2/1‑142 (MQ=255)            tgTAGGCCGACTGATGCAGCGTCTCGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACt                                                                                                                                            <  1:1249933/150‑1 (MQ=255)             gTAGGCCGACTGATGCAGCGTCTCGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCA‑‑‑CGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCg                                                                                                                                        >  2:1621917/1‑150 (MQ=255)               aGGCCGACTGATGCAGCGTCTCGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCATCGACTGcc                                                                                                                                         >  2:1045031/1‑150 (MQ=255)                   cGACTGATGCAGCGTCTCGCTGTCCCGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTc                                                                                                                                     >  1:1298972/1‑150 (MQ=255)                    gACTGATGCAGCGTCTCGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCg                                                                                                                                    <  2:1298972/150‑1 (MQ=255)                          tGCAGCGTCTCGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGc                                                                                                                              <  2:1604579/150‑1 (MQ=255)                             aGCGTCTCGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATg                                                                                                                           <  1:465637/150‑1 (MQ=255)                                 tctcGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGc                                                                                                                       >  2:1691669/1‑150 (MQ=255)                                   tcGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGa                                                                                                                     <  2:685965/150‑1 (MQ=255)                                    cGCTGTCCAGGAATGAATTGTCGGGCTGCCCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGCCACGTTTCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGAt                                                                                                                    <  1:1066083/150‑1 (MQ=255)                                    cGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCACGGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGAt                                                                                                                    <  1:1066078/150‑1 (MQ=255)                                     gCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATc                                                                                                                   >  1:1312647/1‑150 (MQ=255)                                      cTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCa                                                                                                                  <  2:1397497/150‑1 (MQ=255)                                            aGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGAc                                                                                                            >  1:1430647/1‑150 (MQ=255)                                            aGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCA‑‑‑CGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGgc                                                                                                         <  1:1621917/150‑1 (MQ=255)                                                atgaatTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGgcg                                                                                                        >  2:128479/1‑150 (MQ=255)                                                                       gCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCa                                                                                 <  2:1326386/150‑1 (MQ=255)                                                                             tGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGtt                                                                           >  1:1815777/1‑150 (MQ=255)                                                                             tGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGtt                                                                           <  1:128479/150‑1 (MQ=255)                                                                              gCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGttt                                                                          <  2:386967/150‑1 (MQ=255)                                                                              gCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGttt                                                                          >  2:1008328/1‑150 (MQ=255)                                                                                 ggcaTGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCg                                                                       >  2:1694232/4‑150 (MQ=255)                                                                                       tggtgATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCGTGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGc                                                                  <  2:299179/149‑1 (MQ=255)                                                                                       tggtgATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCGTGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGc                                                                  >  1:299179/1‑149 (MQ=255)                                                                                         gtgATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCATGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCcgc                                                               >  1:977499/1‑150 (MQ=255)                                                                                            aTGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGcc                                                            >  2:1556365/1‑150 (MQ=255)                                                                                              gCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTCGTGGCTTTCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCgg                                                          <  1:18798/150‑1 (MQ=255)                                                                                                cgcgCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGt                                                        >  1:1010781/1‑150 (MQ=255)                                                                                                cgcgCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGACAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGt                                                        <  1:1008328/150‑1 (MQ=255)                                                                                                       gATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGttt                                                                          >  2:1746896/1‑125 (MQ=255)                                                                                                       gATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGttt                                                                          <  1:1746896/125‑1 (MQ=255)                                                                                                       gATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCga                                                 <  1:1556365/150‑1 (MQ=255)                                                                                                       gATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCga                                                 <  1:1391905/150‑1 (MQ=255)                                                                                                       gATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCga                                                 <  1:1045031/150‑1 (MQ=255)                                                                                                       gATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCga                                                 >  2:1010028/1‑150 (MQ=255)                                                                                                        aTGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCgag                                                >  1:1129362/1‑150 (MQ=255)                                                                                                             cTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATTaa                                           >  2:282459/1‑150 (MQ=255)                                                                                                             cTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGaa                                           >  1:780229/1‑150 (MQ=255)                                                                                                             cTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGaa                                           >  2:286298/1‑150 (MQ=255)                                                                                                              tGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACTGTCCGGCGCCGGGGTGATGCCGCTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAac                                          >  1:1554319/1‑150 (MQ=255)                                                                                                              tGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAac                                          >  2:1685323/1‑150 (MQ=255)                                                                                                                 aCGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACAcc                                       >  1:1849018/1‑150 (MQ=255)                                                                                                                    ccgccgcTTCTGCAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCa                                    <  2:1043792/150‑1 (MQ=255)                                                                                                                    ccgccgcTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCa                                    <  1:1832468/150‑1 (MQ=255)                                                                                                                    ccgccgcTGCTGTAGCCCGTGGCAATACCATGGGTcagcagcagcggcggcgtgcagcgcatcgagcgcggcatcaccacataccggcagaacgctctgg                                                                                      <  2:1282447‑M2/100‑66 (MQ=255)                                                                                                                    ccgccgcTGCTGTAGCCCGTGGCAATACCATGGGTcagcagcagcggcggcgtgcagcgcatcgagcgcggcatcaccacataccggcagaacgctctgg                                                                                      >  1:1282447‑M2/1‑35 (MQ=255)                                                                                                                     cgccgcTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAg                                   >  1:1406954/1‑150 (MQ=255)                                                                                                                      gccgcTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGt                                  >  2:141652/1‑150 (MQ=255)                                                                                                                       ccgcTGCTGTAGCCCGTGGCAATGCCATGGGTcagcagcggcggcgtgcagcgcatcgagcgcggcatcaccacataccggcagaacgctctgggtcagcccgacaattcattcctggacagcgagacgctgcatcagtcggcctacatc                                 <  2:1473422‑M2/150‑119 (MQ=255)                                                                                                                         gctgctGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCg                               <  1:1694232/150‑1 (MQ=255)                                                                                                                          ctgctgTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCgg                              <  1:1566097/150‑1 (MQ=255)                                                                                                                             ctgTAGCCCGTGGCAATGCCATGGGTcagcagcggcggcgtgcagcgcatcgagcgcggcatcaccacataccggcagaacgctctgggtcagcccgacaattcattcctg                                                                  >  2:1269716‑M2/1‑26 (MQ=255)                                                                                                                             ctgTAGCCCGTGGCAATGCCATGGGTcagcagcggcggcgtgcagcgcatcgagcgcggcatcaccacataccggcagaacgctctgggtcagcccgacaattcattcctg                                                                  <  1:1269716‑M2/111‑86 (MQ=255)                                                                                                                              tgTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCGGGAgg                          <  2:1312647/150‑1 (MQ=255)                                                                                                                               gTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCGGGAGGc                         <  1:1010028/150‑1 (MQ=255)                                                                                                                                tAGCCAGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGt                                                                                                 >  1:1917922/1‑77 (MQ=255)                                                                                                                                tAGCCAGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGt                                                                                                 <  2:1917922/77‑1 (MQ=255)                                                                                                                                  gCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCGGGAGGCATa                      >  1:284287/1‑150 (MQ=255)                                                                                                                                    ccGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCGGGAGGCATagc                    >  1:876819/1‑150 (MQ=255)                                                                                                                                         gCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGATGGCGCCGGGGt                                                                                                 >  2:1263696/1‑68 (MQ=255)                                                                                                                                         gCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGATGGCGCCGGGGt                                                                                                 <  1:1263696/68‑1 (MQ=255)                                                                                                                                         gCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCGGGAGGCATagccagcc               >  1:1311090/1‑150 (MQ=255)                                                                                                                                           aaTGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGa                                                                                               <  2:1402294/68‑1 (MQ=255)                                                                                                                                           aaTGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGa                                                                                               >  1:1402294/1‑68 (MQ=255)                                                                                                                                            aTGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCGGGAGGCATAGCCAGCCGCt            >  1:687875/1‑150 (MQ=255)                                                                                                                                            aTGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCGGGAGGCATAGCCAGCCGCt            <  2:284287/150‑1 (MQ=255)                                                                                                                                             tGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGGATCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCGGGAGGCATAGCCAGCCGCtt           <  1:1040743/150‑1 (MQ=255)                                                                                                                                             tGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGa                                                                                      <  1:322369/75‑1 (MQ=255)                                                                                                                                             tGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGa                                                                                      >  2:322369/1‑75 (MQ=255)                                                                                                                                               ccATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCGGGAGGCATa                      <  1:1313922/137‑1 (MQ=255)                                                                                                                                               ccATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCGGGAGGCATa                      >  2:1313922/1‑137 (MQ=255)                                                                                                                                                 aTGGGTCAGCAGCGACTGCCGCTAGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCGGGAGGCATAGCCAGCCGCTTGACg       >  1:1270876/1‑150 (MQ=255)                                                                                                                                                  tGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCGGGAGGCATAGCCAGCCGCTTGACGc      >  1:870200/1‑150 (MQ=255)                                                                                                                                                      tCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCGGGAGGCATAGCCAGCCGCTTGACGCcaca  >  1:1378730/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                      GAAATTGATGATGTAGGCCGACTGATGCAGCGTCTCGCTGTCCAGGAATGAATTGTCGGGCTGACCCAGAGCGTTCTGCCGGTATGTGGTGATGCCGCGCTCGATGCGCTGCACGCCGCCGCTGCTGTAGCCCGTGGCAATGCCATGGGTCAGCAGCGACTGCCGCTCGGTCAGCATGAAGCGATCACCCGACGGCGCCGGGGTGATGCCGTTGAGCTCACCGGTTTGCGTCGGCCGCGCCGGGTCAGCCGAGATGAACACCGCAGTGCGGGAGGCATAGCCAGCCGCTTGACGCCACA  >  NC_002947/4393831‑4394129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.