New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4933273 =86 (1.150)7 (0.100) 5/246 NT 7.9% coding (1221/1308 nt) flhF flagellar biosynthesis protein FlhF
?NC_002947 4933312 = 79 (1.090)coding (1182/1308 nt) flhF flagellar biosynthesis protein FlhF

Only 100 of 102 total aligned reads displayed.

GACTTTGCACACGCTTCATGGTCAACCCGCTCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCGGCCAGGCCACAGCGCTTGTAGCTGTGGT  >  NC_002947/4933165‑4933460
                                                                                                                                                   |                                                                                                                                                    
gACTTTGCACACGCTTCATGGTCAACCCGCTCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGgcaggtgcag                                                                                                                                                    <  2:695531/150‑1 (MQ=255)
accaaactcgatgaaacggcaagccttggcgatgtgttgagccttgccatcagtcatgaactgccagtgttttcatgtgcggatggcccacgcattcctgacgacctgCACCGCCCGCGTGACCAACTGGTGGCCCCGCGgcaggtgcag                                                                                                                                                    >  2:543459‑M1/109‑150 (MQ=255)
 aCTTTGCACACGCTTCATGGTCAACCCGCTCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGgcaggtgcagg                                                                                                                                                   <  1:648905/150‑1 (MQ=255)
     tGCACACGCTTCATGGTCAACCCGCTCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGgtcgt                                                                                                                                               <  1:653685/150‑1 (MQ=255)
        acacGCTTCATGGTCAACCCGCTCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAg                                                                                                                                            >  2:759663/1‑150 (MQ=255)
        acacGCTTCATGGTCAACCCGCTCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAg                                                                                                                                            >  1:1576324/1‑150 (MQ=255)
        acacGCTTCATGGTCAACCCGCTCGAAGTCGTTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAg                                                                                                                                            >  1:50262/1‑150 (MQ=255)
          acGCTTCATGGACAACCAGATCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGa                                                                                                                                          <  2:902266/150‑1 (MQ=255)
           cGCTTCATGGTCAACCCGCTCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGaa                                                                                                                                         >  2:1025828/1‑150 (MQ=255)
               tCATGGTCAACCCGCTCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCg                                                                                                                                     >  2:822577/1‑150 (MQ=255)
                  tGGTCAACCCGCTCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTgg                                                                                                                                  <  1:1565327/150‑1 (MQ=255)
                  tGGTCAACCCGCTCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTgg                                                                                                                                  <  1:1700515/150‑1 (MQ=255)
                    gTCAACCCGCTCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGc                                                                                                                                >  1:689631/1‑150 (MQ=255)
                     tCAACCCGCTCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGcc                                                                                                                               >  2:1530653/1‑150 (MQ=255)
                             cTCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTaa                                                                                                                       <  1:459864/150‑1 (MQ=255)
                             cTCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTaa                                                                                                                       <  1:774232/150‑1 (MQ=255)
                             cTCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGAAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTaa                                                                                                                       <  1:887207/150‑1 (MQ=255)
                                  cGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGTCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAg                                                                                                                  <  1:136836/150‑1 (MQ=255)
                                   gTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAgg                                                                                                                 <  1:1778912/150‑1 (MQ=255)
                                    tGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGc                                                                                                                <  1:179084/150‑1 (MQ=255)
                                      gagccttgccatcagtcatgaactgccagtggcctatcttaccgatggcccacgcattcctgacgacctgCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAAt                                                                                                                                        <  2:883122‑M1/54‑1 (MQ=255)
                                      gagccttgccatcagtcatgaactgccagtggcctatcttaccgatggcccacgcattcctgacgacctgCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAAt                                                                                                                                        >  1:883122‑M1/71‑124 (MQ=255)
                                        ttGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGgcaggtgc                                                                                                                                                      <  1:740400/108‑1 (MQ=255)
                                        ttGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGgcaggtgc                                                                                                                                                      >  2:740400/1‑108 (MQ=255)
                                         tgtgATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTg                                                                                                           <  2:660619/150‑1 (MQ=255)
                                          gtgATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTgg                                                                                                          <  1:639684/150‑1 (MQ=255)
                                           ttgccatcagtcatgaactgccagtggcctatcttaccgatggcccacgcattcctgacgacctgCACCTGCCGCGTGACCAACTGGTGGCCCCGCGgcaggtgcag                                                                                                                                                    <  2:1165202‑M1/42‑1 (MQ=255)
                                           ttgccatcagtcatgaactgccagtggcctatcttaccgatggcccacgcattcctgacgacctgCACCTGCCGCGTGACCAACTGGTGGCCCCGCGgcaggtgcag                                                                                                                                                    >  1:1165202‑M1/66‑107 (MQ=255)
                                           tgATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGc                                                                                                         <  2:1236349/150‑1 (MQ=255)
                                           tgATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGc                                                                                                         <  1:1754570/150‑1 (MQ=255)
                                            gATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCa                                                                                                        >  1:238564/1‑150 (MQ=255)
                                             aTAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCa                                                                                                        <  1:131199/149‑1 (MQ=255)
                                             aTAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCa                                                                                                        >  2:131199/1‑149 (MQ=255)
                                              tAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCACCGGTAAGATAGGCCACTGGCAGt                                                                                                      >  2:431674/1‑150 (MQ=255)
                                                  gaTCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTc                                                                                                    >  1:546371/1‑148 (MQ=255)
                                                  gaTCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTc                                                                                                    <  2:546371/148‑1 (MQ=255)
                                                  gaTCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCAt                                                                                                  <  2:1869346/150‑1 (MQ=255)
                                                    tCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGa                                                                                                <  2:1570469/150‑1 (MQ=255)
                                                          aaCATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATg                                                                                          <  1:1289968/150‑1 (MQ=255)
                                                           aCATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATgg                                                                                         >  2:1365818/1‑150 (MQ=255)
                                                           aCATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATgg                                                                                         <  1:822577/150‑1 (MQ=255)
                                                            cATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGc                                                                                        >  2:549247/1‑150 (MQ=255)
                                                                tCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGgcaggtgcaggt                                                                                                                                                  >  2:885627/1‑88 (MQ=255)
                                                                tCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGgcaggtgcaggt                                                                                                                                                  <  1:885627/88‑1 (MQ=255)
                                                                tCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTgg                                                                                                                                  >  1:1766226/1‑104 (MQ=255)
                                                                tCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTgg                                                                                                                                  <  2:1766226/104‑1 (MQ=255)
                                                                tCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAgg                                                                                    >  1:1902874/1‑150 (MQ=255)
                                                                    ccATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCa                                                                                >  1:63566/1‑150 (MQ=255)
                                                                     cATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCaa                                                                               <  1:549247/150‑1 (MQ=255)
                                                                          ccTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACAt                                                                          >  1:1493059/1‑150 (MQ=255)
                                                                              ttCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGcc                                                                      >  2:334346/1‑150 (MQ=255)
                                                                                cGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCaa                                                                    <  2:1576324/150‑1 (MQ=255)
                                                                                cGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCaa                                                                    <  2:1419539/150‑1 (MQ=255)
                                                                                 gCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAg                                                                   >  2:926831/1‑150 (MQ=255)
                                                                                  cTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCAGCGATAAGAGAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAgg                                                                  <  2:927247/150‑1 (MQ=255)
                                                                                   tGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGc                                                                 >  1:978969/1‑150 (MQ=255)
                                                                                      gCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTg                                                              >  2:445959/1‑150 (MQ=255)
                                                                                       cTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGc                                                             >  2:468565/1‑150 (MQ=255)
                                                                                        tCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGcc                                                            <  1:1602830/150‑1 (MQ=255)
                                                                                          gTCCTGCGGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGt                                                          >  2:600090/1‑150 (MQ=255)
                                                                                           tCCTGCTGCTGCACATTCACCGCCCGCGTGACCATCTCACGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGtt                                                         <  1:1534617/150‑1 (MQ=255)
                                                                                           tCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGtt                                                         >  2:936361/1‑150 (MQ=255)
                                                                                           tCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGtt                                                         >  1:446430/1‑150 (MQ=255)
                                                                                           tCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGtt                                                         >  2:1138451/1‑150 (MQ=255)
                                                                                             attcctgacgacctgcacctgccgcggggccaccagttggtcacgcgggcggtgCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTc                                                                                 <  2:883122‑M2/70‑1 (MQ=255)
                                                                                             attcctgacgacctgcacctgccgcggggccaccagttggtcacgcgggcggtgCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTc                                                                                 >  1:883122‑M2/55‑124 (MQ=255)
                                                                                               gctgctgcACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATgg                                                                                         >  1:788963/1‑114 (MQ=255)
                                                                                               gctgctgcACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATgg                                                                                         <  2:788963/114‑1 (MQ=255)
                                                                                               gctgctgcACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCAt                                                     <  1:334346/150‑1 (MQ=255)
                                                                                                ctgctgcACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCAGTGGGCGATCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATc                                                    >  2:528826/1‑150 (MQ=255)
                                                                                                   ctgcACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAg                                                 <  2:689631/150‑1 (MQ=255)
                                                                                                    tgcACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGgtcgtc                                                                                                                                              <  2:168459/56‑1 (MQ=255)
                                                                                                    tgcACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGgtcgtc                                                                                                                                              >  1:168459/1‑56 (MQ=255)
                                                                                                       acaTTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTg                                             >  2:1007501/1‑150 (MQ=255)
                                                                                                         ctgcacctgccgcggggccaccagttggtcacgcgggcggtgCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGt                                           >  2:1029463‑M2/43‑150 (MQ=255)
                                                                                                         ctgcacctgccgcggggccaccagttggtcacgcgggcggtgCAGGTCGTCAGGAATGCGTGGGCCATCCGCACATGAAAACACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGt                                           >  2:543459‑M2/43‑150 (MQ=255)
                                                                                                         ctgcacctgccgcggggccaccagttggtcacgcggcaggtgCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCaa                                                                                      <  2:1165202‑M2/65‑1 (MQ=255)
                                                                                                         ctgcacctgccgcggggccaccagttggtcacgcggcaggtgCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCaa                                                                                      >  1:1165202‑M2/43‑107 (MQ=255)
                                                                                                              CCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTTTTAAAACCATTTGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGa                                      >  2:50262‑M1/1‑150 (MQ=255)
                                                                                                              CCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGa                                      >  1:1530653‑M1/1‑150 (MQ=255)
                                                                                                               ctgccgcggggccaccagttggtcacgcgggcggtgCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGAt                                     >  2:1059025‑M2/37‑150 (MQ=255)
                                                                                                                  ccgcGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCa                                  <  1:1365818/150‑1 (MQ=255)
                                                                                                                           cAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCggccag                         <  1:1025828/150‑1 (MQ=255)
                                                                                                                            aaCTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCggccagg                        >  2:148214/1‑150 (MQ=255)
                                                                                                                                 gtggCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCGGCCAGGCcaca                   >  2:1105925/1‑150 (MQ=255)
                                                                                                                                 gatctcccGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGACACCAGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCGGCCAGGCcaca                   <  1:407023/145‑1 (MQ=255)
                                                                                                                                     ccccGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCGGCCAGGCCACAgcgc               <  1:1796668/150‑1 (MQ=255)
                                                                                                                                      cccGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCaa                                                                               <  1:188934/85‑1 (MQ=255)
                                                                                                                                      cccGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCaa                                                                               >  2:188934/1‑85 (MQ=255)
                                                                                                                                      cccGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCGGCCAGGCCACAGCGCt              >  2:1576870/1‑150 (MQ=255)
                                                                                                                                      cccGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCGGCCAGGCCACAGCGCt              >  1:272789/1‑150 (MQ=255)
                                                                                                                                      cccGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCGGCCAGGCCACAGCGCt              >  2:769364/1‑150 (MQ=255)
                                                                                                                                      cccGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCGGCCAGGCCACAGCCCt              >  2:224553/1‑150 (MQ=255)
                                                                                                                                       ccGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCGGCCAGGCCACAGCGCtt             <  1:445959/150‑1 (MQ=255)
                                                                                                                                       ccGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCGGCCAGGCCACAGCGCtt             >  2:517296/1‑150 (MQ=255)
                                                                                                                                       ccGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCGGCCAGGCCACAGCGCtt             >  2:1644774/1‑150 (MQ=255)
                                                                                                                                       ccGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCGGCCAGGCCACAGCGCtt             <  1:759663/150‑1 (MQ=255)
                                                                                                                                       ccGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCGGCCAGGCCACAGCGCtt             >  2:642662/1‑150 (MQ=255)
                                                                                                                                               ggtgCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCGGCCAGGCCACAGCGCTTGTAGCtgt     <  2:1687899‑M2/146‑1 (MQ=255)
                                                                                                                                                  gCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCGGCCAGGCCACAGCGCTTGTAGCTGTGGt  >  1:1516604‑M2/2‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GACTTTGCACACGCTTCATGGTCAACCCGCTCGCCGTGGGTTGTGATAGAGATCAGCGAACATGTCGGCCATGGCCTCTTCGCTGGGCTCGTCCTGCTGCTGCACATTCACCGCCCGCGTGACCAACTGGTGGCCCCGCGGCAGGTGCAGGTCGTCAGGAATGCGTGGGCCATCGGTAAGATAGGCCACTGGCAGTTCATGACTGATGGCAAGGCTCAACACATCGCCAAGGCTTGCCGTTTCATCGAGTTTGGTCAGGATGCAGCCGGCCAGGCCACAGCGCTTGTAGCTGTGGT  >  NC_002947/4933165‑4933460

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.