New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 497896377 (1.030)4 (0.060) 4/238 NT 5.4% coding (504/786 nt) flgG flagellar basal‑body rod protein FlgG
?NC_002947 = 4978986 68 (0.970)coding (481/786 nt) flgG flagellar basal‑body rod protein FlgG

ACCGTTCAGGCCTGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGTACCGTCACGGGTATACGACACGG  >  NC_002947/4978837‑4979135
                                                                                                                                                     |                                                                                                                                                     
aCCGTGCAGGGCGGGGGTGGCGACGTGAGGCGCGCCACTGGCGGCGGTGTCGAGGAACAGGTGGTCGCCGATGGCCTGCAGGGCGGCCGGGTTGATGAAGGCGGCGGGCGGGATGTTGCCGATAACCTGTGCAGCCGGGTTGCCGGCggt                                                                                                                                                       <  2:506186/150‑1 (MQ=255)
 ccGTTCAGGCCTGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGACCAGGTTGTCGCCGATCGCCGGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTg                                                                                                                                                      >  1:270236‑M2/1‑149 (MQ=255)
    ttCAGGCCTGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTAGGCGGTCTGGATGTTGCCGAACACCCGTGCGGCCTTGTTGCCGGCGGTgggg                                                                                                                                                   <  2:1854040‑M2/150‑5 (MQ=255)
         gCCTGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTAGGCGGTCTGGATGTTGGCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGa                                                                                                                                              >  2:161470/1‑150 (MQ=255)
         gCCTGGGGTGCCGACCTCATGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGa                                                                                                                                              >  1:65119/1‑150 (MQ=255)
           cTGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGaca                                                                                                                                            >  1:661493/1‑150 (MQ=255)
            tGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGacac                                                                                                                                           <  1:828574/150‑1 (MQ=255)
            tGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGacac                                                                                                                                           <  1:1649554/150‑1 (MQ=255)
              gggTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGac                                                                                                                                             <  1:1743700/146‑1 (MQ=255)
              gggTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGac                                                                                                                                             >  2:1743700/1‑146 (MQ=255)
                    cGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAAGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGt                                                                                                                                   >  2:1245282/1‑150 (MQ=255)
                     gACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGGTCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTc                                                                                                                                  <  2:102877/150‑1 (MQ=255)
                     gACCTCAGGCGCGCCACTCGCCTCGCTCTCAACCAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTc                                                                                                                                  <  1:1533744/150‑1 (MQ=255)
                        cTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTggtga                                                                                                                                                  <  2:438827‑M2/131‑6 (MQ=255)
                        cTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTggtga                                                                                                                                                  >  1:438827‑M2/1‑126 (MQ=255)
                         tgcggCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCANCTGTNCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTgg                                                                                                                              <  1:161470/147‑1 (MQ=255)
                         tGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTgg                                                                                                                              >  2:603346/1‑150 (MQ=255)
                               gcgcCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGGCGGCGGGGGTGATCGACACGGTGCCGTCCTGGCCAACg                                                                                                                        >  1:709104/1‑150 (MQ=255)
                                   cACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGa                                                                                                                    >  2:133770/1‑150 (MQ=255)
                                    ccTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGaa                                                                                                                   <  1:656541/149‑1 (MQ=255)
                                    aCTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGaa                                                                                                                   <  2:1243645/150‑1 (MQ=255)
                                     cTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAg                                                                                                                  <  2:1326818/150‑1 (MQ=255)
                                     cTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAg                                                                                                                  <  1:1286713/150‑1 (MQ=255)
                                       ggcggcGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGt                                                                                                                <  1:133770/150‑1 (MQ=255)
                                               tctcGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCTGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGcgt                                                                                                        <  1:526687/150‑1 (MQ=255)
                                                   gggtaaCAGGTTGTCGCCGATCGCCTGCGGGCCGGCCGGGTTTATGAAGTCGGCGGTCTGGATGTTGCGGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGGCCTGGCCATCGGTGAAGGTCTGCGCGTCGtt                                                                                                    <  2:709104/146‑1 (MQ=255)
                                                   gAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTggt                                                                                                                                                    >  2:1491652‑M2/1‑99 (MQ=255)
                                                   gAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTggt                                                                                                                                                    <  1:1491652‑M2/102‑4 (MQ=255)
                                                   gAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGtt                                                                                                    >  2:1649718/1‑150 (MQ=255)
                                                   gAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGtt                                                                                                    >  1:1502489/1‑150 (MQ=255)
                                                     ggAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAg                                                                                                  <  2:613442/150‑1 (MQ=255)
                                                     ggAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAg                                                                                                  >  2:994523/1‑150 (MQ=255)
                                                         cAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCAc                                                                                              <  1:436485/150‑1 (MQ=255)
                                                                tCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACaa                                                                                         <  1:581642/148‑1 (MQ=255)
                                                                tCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACaa                                                                                         >  2:581642/1‑148 (MQ=255)
                                                                tCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATg                                                                                       <  1:370264/150‑1 (MQ=255)
                                                                tCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATg                                                                                       <  1:263029/150‑1 (MQ=255)
                                                                  gCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTCGGCACGACAATGGc                                                                                     <  2:1554868/150‑1 (MQ=255)
                                                                  gCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGCGTTGCCGGCGGTGGTGATCAAGACGCTGCAAGCGTCGCCTACGGTGTAGGTGTGCGCGTCGTTAGGCACGACAATGGc                                                                                     >  1:1375686/1‑150 (MQ=255)
                                                                  accGATAGCGTGTAGGCCGGCCGGGGCGACGGAGGCGGCGGTCAGGTTTTGGCGGAGCACGTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGGCTGCGCGTCGTTACGCACGACAATGGc                                                                                     >  2:1012237/2‑150 (MQ=255)
                                                                         gCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTcc                                                                              >  1:1318800/1‑150 (MQ=255)
                                                                            tGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAgg                                                                           >  2:1121214/1‑150 (MQ=255)
                                                                              cAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCTGGGc                                                                         <  2:661493/150‑1 (MQ=255)
                                                                               aGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCg                                                                        >  1:434255/1‑150 (MQ=255)
                                                                                   cggccggGGTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGTTCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGCCGTTAGGCACGACAATGGCAGGGTCCCGGGCGTCGc                                                                    >  1:865103/1‑150 (MQ=255)
                                                                                          gctgatgaAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTc                                                             >  2:546210/3‑150 (MQ=255)
                                                                                           ttGATGAAGGCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCa                                                            <  1:1233331/150‑1 (MQ=255)
                                                                                              atgaAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTg                                                         >  2:671614/1‑150 (MQ=255)
                                                                                              atgaAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGCCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTg                                                         >  2:1275882/1‑150 (MQ=255)
                                                                                               tgaAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCAAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTgc                                                        >  1:684156/1‑149 (MQ=255)
                                                                                                  aGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACgg                                                     >  2:1671734/1‑149 (MQ=255)
                                                                                                   gTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGAt                                                    >  2:1285179/1‑150 (MQ=255)
                                                                                                    tCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATc                                                   >  2:757828/1‑150 (MQ=255)
                                                                                                    tCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATc                                                   >  2:1558898/1‑150 (MQ=255)
                                                                                                      ggcggTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTg                                                 <  1:659286/150‑1 (MQ=255)
                                                                                                      ggcggTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTg                                                 >  2:1898398/1‑150 (MQ=255)
                                                                                                      ggcggTATGGATGTTGCCGAAAACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTg                                                 >  2:724433/1‑150 (MQ=255)
                                                                                                       gcggTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCAAACTGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTgg                                                <  1:603346/150‑1 (MQ=255)
                                                                                                         ggTCTGGATGGTGCCGATCACCTGTTCAGCCGGGTTGCCGGCGGTGGTGATTGACACGGGGCCGTCCTGGTCAACGGTGAAGGTCTGCGCGTCGTTATGCACGACAATGGCAGGCTCCAGGGCGTTGTTGTTGTCAGTGACGATCTGGcc                                              <  2:118350/150‑1 (MQ=255)
                                                                                                           tCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGt                                            <  1:546210/150‑1 (MQ=255)
                                                                                                               gATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGa                                        >  1:46687/1‑150 (MQ=255)
                                                                                                               gATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGa                                        >  1:43362/1‑150 (MQ=255)
                                                                                                                aTGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCCACACGTTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAg                                       <  1:116161/150‑1 (MQ=255)
                                                                                                                   ttGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCCGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTc                                    <  1:981478/150‑1 (MQ=255)
                                                                                                                      ccGATCACCTGTGCAGCCGGGTTGCCGGCGGTggtgatcggcaacatccagaccgccgacttcatcaacccggccggcctgcaggcgatcggcgacaacctgttcctcgagaccgccgccagtg                                                           <  2:399103‑M2/124‑93 (MQ=255)
                                                                                                                      ccGATCACCTGTGCAGCCGGGTTGCCGGCGGTggtgatcggcaacatccagaccgccgacttcatcaacccggccggcctgcaggcgatcggcgacaacctgttcctcgagaccgccgccagtg                                                           >  1:399103‑M2/1‑32 (MQ=255)
                                                                                                                      ccGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAgg                                 <  1:671614/150‑1 (MQ=255)
                                                                                                                       cGATCACCTGTGCAGCCGGGTTGCCGGCGGTggtgatcggcaacatccagaccgccgacttcatcaacccggccggcctgcaggcgatcggcgacaacctgttcctcgagaccgccgccagcggcgcgcctcaggtcggcaccccaggcc                                <  2:685516‑M2/150‑120 (MQ=255)
                                                                                                                       cGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTTACGATCTGGCCGTCGGAGTTCAGGt                                <  1:994523/150‑1 (MQ=255)
                                                                                                                       cGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGt                                >  2:1143169/1‑150 (MQ=255)
                                                                                                                       cGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGt                                >  1:48483/1‑150 (MQ=255)
                                                                                                                          tCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGa                             <  2:887355/150‑1 (MQ=255)
                                                                                                                           cACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGaa                            <  2:337254/150‑1 (MQ=255)
                                                                                                                           cACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGaa                            >  1:1313193/1‑150 (MQ=255)
                                                                                                                            aCCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAg                           <  2:1502489/150‑1 (MQ=255)
                                                                                                                            aCCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAg                           <  1:1245282/150‑1 (MQ=255)
                                                                                                                            aCCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAg                           <  1:1121214/150‑1 (MQ=255)
                                                                                                                             ccTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAgg                          >  2:454350/1‑150 (MQ=255)
                                                                                                                              cTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGt                         >  1:1493539/1‑150 (MQ=255)
                                                                                                                                gtgCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGTAc                       <  2:48483/150‑1 (MQ=255)
                                                                                                                                    aGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAGGGTACCGTc                   <  2:1463279/150‑1 (MQ=255)
                                                                                                                                     gCCGGATTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGATCAGGTGGAAGGCAACGTCa                  >  2:982801/1‑150 (MQ=255)
                                                                                                                                      ccGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGTACCGTCAc                 >  2:802757/1‑150 (MQ=255)
                                                                                                                                        gggTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGTACCGTCACgg               <  2:222730/150‑1 (MQ=255)
                                                                                                                                              ccGGCGGTggtgatcggcaacatccagaccgccgacttcatcaacccggccggcctgcaggcgatcggcgacaacctgttcctcgagaccgccgccagcggcgcgcctcaggtcggcaccccaggcctgaacggttttggcaccaccttg         >  1:685516‑M2/1‑8 (MQ=255)
                                                                                                                                              ccGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCTCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGTACCGTCACGGGTATAc         <  1:724433/150‑1 (MQ=255)
                                                                                                                                                  cggTGGTGCTCGAAACGGTGCAGTACTGACCTACGGTGCAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGTACCGTCACGGGTATACGaca     <  2:1040075/150‑1 (MQ=255)
                                                                                                                                                     tggtgATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGTACCGTCACGGGTATACGACACgg  >  2:1209541/1‑150 (MQ=255)
                                                                                                                                                     tggtgATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGTACCGTCACGGGTATACGACACgg  <  1:1143169/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ACCGTTCAGGCCTGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGGCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGTACCGTCACGGGTATACGACACGG  >  NC_002947/4978837‑4979135

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.