New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2465132 =	24 (1.280)	4 (0.220)	4/238	NT	15.3%	coding (549/1353 nt)	PP_2157	sensor histidine kinase
	?	NC_002947	2465167 =	21 (1.160)					coding (514/1353 nt)	PP_2157	sensor histidine kinase

ATGCAGTCGCCGCGACTGACCCTGTACCTCGACATCACCCACCACCAGCACTTCCTGCAGGGCATGCAACGACTGATCTGGCTGACGGTCGGCCTGTCGGCGCTAATCACCGCACTATTGGGTGCCTGGGCCGCCCGCAGCGGCCTGCGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2465284‑2465132 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaATAGTGCGGTGATTAGCGCCGACAGGCCGACCGTCAGCCAGATCAGTCGTTGCATGCCCTGCAGGAAGTGCTGGTGGTGGGTGATGTCGAGGTACAGGGTCAGTCGCGGCGACTGCATGGCGCCCTGTGTCAGGGGCACGGACAGGC  >  NC_002947/2465167‑2465313                                                                                                                                                                                                                                                                                                              ATGCAGTCGCCGCGACTGGCCCTGTACCTCGACATCACCCACCACCAGCACTTCCTGCAGGGCATGCAACGACTGATCTGGCTGACGGTCGGCCTGTCGGCGCTAATCACCGCACTATTGGGTGCCTGGGCCGCCCGCAGCGGCCTGCGC                                                                                                                                                        >  1:47178/1‑150                                                                                                                GCACTATTGGGTGCCTGGGCCGCCCGCAGCGGCCTGCGCCCAATAGTGCGGTGATTAGCGCCGACAGGCCGACCGTCAGCCAGATCAGTCGTTGCATGCCCTGCAGGAAGTGCTGGTGGTGGGTGATGTCGAGGTACAGGGTCAGTCGCG                                         >  1:355350/1‑150                                                                                                                      TTGGGTGCCTGGGCCGCCCGCAGCGGCCTGCGCCCAATAGTGCGGTGATTAGCGCCGACAGGCCGACCGTCAGCCAGATCAGTCGTTGCATGCCCTGCAGGAAGTGCTGGTGGTGGGT                                                                   <  1:39404/118‑1                                                                                                                      TTGGGTGCCTGGGCCGCCCGCAGCGGCCTGCGCCCAATAGTGCGGTGATTAGCGCCGACAGGCCGACCGTCAGCCAGATCAGTCGTTGCATGCCCTGCAGGAAGTGCTGGTGGTGGGT                                                                   >  2:39404/1‑118                                                                                                                                        CGCAGCGGCCTGCGCCCAATAGTGCGGTGATTAGCGCCGACAGGCCGACCGTCAGCCAGATCAGTCGTTGCATGCCCTGCAGGAAGTGCTGGTGGTGGGTGATGTCGAGGTACAGGGTCAGTCGCGGCGACTGCATGGCGCCCTGTGTCA                 <  2:355350/150‑1                                                                                                                                                       CCAATAGTGCGGTGATTAGCGCCGACAGGCCGACCGTCAGCCAGATCAGTCGTTGCATGCCCTGCAGGAAGTGCTGGTGGTGGGTGATGTCGAGGTACAGGGTCAGTCGCGGCGACTGCATGGCTCCCTGTGTCAGGGGCACGGACAGGC  <  1:395803/150‑1                                                                                                                                                                                                                                                                                                              ATGCAGTCGCCGCGACTGACCCTGTACCTCGACATCACCCACCACCAGCACTTCCTGCAGGGCATGCAACGACTGATCTGGCTGACGGTCGGCCTGTCGGCGCTAATCACCGCACTATTGGGTGCCTGGGCCGCCCGCAGCGGCCTGCGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2465284‑2465132 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaATAGTGCGGTGATTAGCGCCGACAGGCCGACCGTCAGCCAGATCAGTCGTTGCATGCCCTGCAGGAAGTGCTGGTGGTGGGTGATGTCGAGGTACAGGGTCAGTCGCGGCGACTGCATGGCGCCCTGTGTCAGGGGCACGGACAGGC  >  NC_002947/2465167‑2465313

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.