| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4366918 = | 14 (0.750) | 4 (0.220) | 4/234 | NT | 22.7% | intergenic (‑140/+40) | PP_3843/PP_3844 | hypothetical protein/D‑aminopeptidase |
| ? | NC_002947 | 4366948 = | 14 (0.780) | intergenic (‑170/+10) | PP_3843/PP_3844 | hypothetical protein/D‑aminopeptidase | |||||
TTCGCTTGGCCGCCCGAGCTTCAGGACAAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4366949‑4366918‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagcgAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGGTGTCAGCGGCTAGTAAGGCGTTGATGATGGCTTCTTCCA > NC_002947/4366948‑4367094 TTCGCTTGGCCGCCCGAGCTTCAGGACAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGC < 2:495260/94‑1TTCGCTTGGCCGCCCGAGCTTCAGGACAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGAGGCAAGGCTTTGAGCAGC > 1:495260/1‑94 CTTGGCCGCCCGAGCTTCAGGACAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCT < 1:136569/70‑1 CTTGGCCGCCCGAGCTTCAGGACAAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCT > 2:136569/1‑70 AAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGTTACTGCATGGCCGTTGCCTTCGGCGGTGGCAGCGGCTAGTAAGGCGTTGATGATGGCTTCTTC > 1:197105/1‑150 AAGCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGGTGTCAGCGGCTAGTAAGGCGTTGATGATGGCTTCTTC < 2:437065/150‑1 GCGAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGGTGTCAGCGGCTAGTAAGGCGTTGATGATGGCTTCTTCCA > 2:307818/1‑150 TTCGCTTGGCCGCCCGAGCTTCAGGACAAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4366949‑4366918‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagcgAAGAGATCAGTTAACCATTCGCCGCTCCCGGCCAGCCGGCCTGATGCAAGGCTTTGAGCAGCGTCTCACAATCCAGTCCCGGTACTGCATGGCCGTTGCCTTCGGCGGTGTCAGCGGCTAGTAAGGCGTTGATGATGGCTTCTTCCA > NC_002947/4366948‑4367094 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |